Protein–RNA interactions for Protein: P23463

Hoxd8, Homeobox protein Hox-D8, mousemouse

Predictions only

Length 289 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxd8P23463 Lhx1-204ENSMUST00000184646 1201 ntTSL 5 BASIC20.41■□□□□ 0.86
Hoxd8P23463 Cetn3-201ENSMUST00000022009 1226 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Hoxd8P23463 Gm16505-202ENSMUST00000220976 1626 ntTSL 5 BASIC20.41■□□□□ 0.86
Hoxd8P23463 Hsf1-201ENSMUST00000072838 2018 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Hoxd8P23463 Gm9934-201ENSMUST00000098303 2077 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Hoxd8P23463 Slc1a5-201ENSMUST00000108496 2764 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Hoxd8P23463 Gm21992-201ENSMUST00000172000 1434 ntAPPRIS P1 TSL 2 BASIC20.4■□□□□ 0.86
Hoxd8P23463 Gm21992-206ENSMUST00000179909 1435 ntTSL 5 BASIC20.4■□□□□ 0.86
Hoxd8P23463 Map1lc3b-203ENSMUST00000181521 775 ntTSL 3 BASIC20.4■□□□□ 0.86
Hoxd8P23463 1700003N22Rik-201ENSMUST00000194834 808 ntBASIC20.4■□□□□ 0.86
Hoxd8P23463 Gpn2-201ENSMUST00000030661 1367 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Hoxd8P23463 Cotl1-201ENSMUST00000034285 1596 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Hoxd8P23463 A930018P22Rik-201ENSMUST00000040374 822 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Hoxd8P23463 Spats2-201ENSMUST00000063517 3065 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Hoxd8P23463 Cacnb3-202ENSMUST00000109150 2670 ntTSL 5 BASIC20.4■□□□□ 0.86
Hoxd8P23463 Ldb1-202ENSMUST00000056931 2295 ntAPPRIS P2 TSL 1 (best) BASIC20.39■□□□□ 0.86
Hoxd8P23463 Vegfa-207ENSMUST00000142351 1973 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.86
Hoxd8P23463 Adssl1-202ENSMUST00000180015 1819 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
Hoxd8P23463 Ppp1r12c-201ENSMUST00000013886 2983 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Hoxd8P23463 Mpc1-208ENSMUST00000155364 958 ntAPPRIS P1 TSL 2 BASIC20.39■□□□□ 0.85
Hoxd8P23463 Rtl8b-201ENSMUST00000088778 1232 ntAPPRIS P1 BASIC20.39■□□□□ 0.85
Hoxd8P23463 Slc3a2-201ENSMUST00000010239 1819 ntAPPRIS P3 TSL 1 (best) BASIC20.39■□□□□ 0.85
Hoxd8P23463 Mcam-201ENSMUST00000034650 2989 ntAPPRIS P2 TSL 1 (best) BASIC20.38■□□□□ 0.85
Hoxd8P23463 H2-Q7-201ENSMUST00000071951 1406 ntAPPRIS P2 TSL 1 (best) BASIC20.38■□□□□ 0.85
Hoxd8P23463 Arrb2-203ENSMUST00000102563 1352 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Hoxd8P23463 Pex16-201ENSMUST00000028650 1392 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Hoxd8P23463 Gm10655-201ENSMUST00000098658 1397 ntBASIC20.38■□□□□ 0.85
Hoxd8P23463 Gm12669-201ENSMUST00000122162 1009 ntBASIC20.38■□□□□ 0.85
Hoxd8P23463 Cdk19os-202ENSMUST00000143103 1124 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Hoxd8P23463 Gm44965-201ENSMUST00000204121 360 ntAPPRIS P1 TSL 3 BASIC20.38■□□□□ 0.85
Hoxd8P23463 Capzb-204ENSMUST00000102508 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Hoxd8P23463 Wrnip1-201ENSMUST00000021832 2633 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Hoxd8P23463 Fbxo27-203ENSMUST00000108281 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
Hoxd8P23463 H2-Q7-203ENSMUST00000078205 1419 ntTSL 5 BASIC20.37■□□□□ 0.85
Hoxd8P23463 Atpaf1-203ENSMUST00000176047 2330 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Hoxd8P23463 Cacnb1-203ENSMUST00000103144 2236 ntTSL 5 BASIC20.37■□□□□ 0.85
Hoxd8P23463 Tcerg1l-201ENSMUST00000160436 2565 ntAPPRIS P1 TSL 5 BASIC20.37■□□□□ 0.85
Hoxd8P23463 A230065N10Rik-201ENSMUST00000172178 1028 ntBASIC20.37■□□□□ 0.85
Hoxd8P23463 Mir5133-201ENSMUST00000174955 77 ntBASIC20.37■□□□□ 0.85
Hoxd8P23463 Fam228b-205ENSMUST00000218575 1281 ntAPPRIS ALT2 TSL 2 BASIC20.37■□□□□ 0.85
Hoxd8P23463 Nudt14-202ENSMUST00000221397 1241 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Hoxd8P23463 Vax2-201ENSMUST00000037807 1242 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Hoxd8P23463 Fkbp1a-201ENSMUST00000044011 1658 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Hoxd8P23463 Tfap2e-201ENSMUST00000048194 2085 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Hoxd8P23463 Notum-202ENSMUST00000106177 2212 ntAPPRIS P1 TSL 5 BASIC20.37■□□□□ 0.85
Hoxd8P23463 Cbln2-201ENSMUST00000068423 2475 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Hoxd8P23463 Ankrd33b-203ENSMUST00000110410 2070 ntAPPRIS P3 TSL 1 (best) BASIC20.36■□□□□ 0.85
Hoxd8P23463 Mpz-202ENSMUST00000111334 1278 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Hoxd8P23463 3110082J24Rik-201ENSMUST00000127749 327 ntAPPRIS P1 TSL 5 BASIC20.36■□□□□ 0.85
Hoxd8P23463 Ntn5-201ENSMUST00000107742 1574 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Hoxd8P23463 Dao-201ENSMUST00000086599 1525 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Hoxd8P23463 Sstr4-201ENSMUST00000109962 1424 ntAPPRIS P1 BASIC20.36■□□□□ 0.85
Hoxd8P23463 Acvrl1-206ENSMUST00000121718 1906 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Hoxd8P23463 Msx1-201ENSMUST00000063116 1935 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Hoxd8P23463 Ptpn12-201ENSMUST00000030556 3280 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Hoxd8P23463 Zfp821-201ENSMUST00000034163 2127 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Hoxd8P23463 Zfp637-201ENSMUST00000112858 650 ntTSL 2 BASIC20.35■□□□□ 0.85
Hoxd8P23463 Zfp637-203ENSMUST00000112860 1231 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Hoxd8P23463 Hist1h2ap-201ENSMUST00000081342 482 ntAPPRIS P1 BASIC20.35■□□□□ 0.85
Hoxd8P23463 Acsl3-203ENSMUST00000134566 2492 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Hoxd8P23463 Mlf2-201ENSMUST00000032214 1451 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Hoxd8P23463 Zfp771-201ENSMUST00000052509 1484 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Hoxd8P23463 Tssk6-201ENSMUST00000050373 1335 ntAPPRIS P1 BASIC20.34■□□□□ 0.85
Hoxd8P23463 Olig1-201ENSMUST00000056882 2162 ntAPPRIS P1 BASIC20.34■□□□□ 0.85
Hoxd8P23463 Hand2-201ENSMUST00000040104 2351 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Hoxd8P23463 Gm7290-201ENSMUST00000104990 617 ntBASIC20.34■□□□□ 0.85
Hoxd8P23463 Rbm39-202ENSMUST00000109584 667 ntTSL 5 BASIC20.34■□□□□ 0.85
Hoxd8P23463 Gm12918-201ENSMUST00000120234 636 ntBASIC20.34■□□□□ 0.85
Hoxd8P23463 Gm15710-201ENSMUST00000121821 636 ntBASIC20.34■□□□□ 0.85
Hoxd8P23463 Atraid-201ENSMUST00000013766 966 ntAPPRIS P2 TSL 1 (best) BASIC20.34■□□□□ 0.85
Hoxd8P23463 Boll-203ENSMUST00000159398 658 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
Hoxd8P23463 Tecr-203ENSMUST00000165740 1120 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Hoxd8P23463 Rian-206ENSMUST00000182119 329 ntTSL 3 BASIC20.34■□□□□ 0.85
Hoxd8P23463 Gm5075-201ENSMUST00000196916 622 ntBASIC20.34■□□□□ 0.85
Hoxd8P23463 AC175538.2-202ENSMUST00000224997 1057 ntAPPRIS P1 BASIC20.34■□□□□ 0.85
Hoxd8P23463 Rpl13-ps6-201ENSMUST00000079761 636 ntBASIC20.34■□□□□ 0.85
Hoxd8P23463 Rpl13-ps3-201ENSMUST00000079960 624 ntBASIC20.34■□□□□ 0.85
Hoxd8P23463 Zfp692-202ENSMUST00000153510 1887 ntAPPRIS P1 TSL 5 BASIC20.34■□□□□ 0.85
Hoxd8P23463 Hey1-201ENSMUST00000042412 2423 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Hoxd8P23463 3010003L21Rik-201ENSMUST00000047953 1729 ntTSL 5 BASIC20.33■□□□□ 0.85
Hoxd8P23463 Hoxb6-201ENSMUST00000000704 1321 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Hoxd8P23463 Fdx1l-201ENSMUST00000010348 812 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Hoxd8P23463 Wipi2-202ENSMUST00000110778 1959 ntAPPRIS P1 TSL 5 BASIC20.33■□□□□ 0.84
Hoxd8P23463 Gm9817-201ENSMUST00000054395 2531 ntAPPRIS P1 BASIC20.32■□□□□ 0.84
Hoxd8P23463 Whrn-202ENSMUST00000063672 2804 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Hoxd8P23463 Ppt2-204ENSMUST00000168391 1342 ntAPPRIS P1 TSL 5 BASIC20.32■□□□□ 0.84
Hoxd8P23463 Fam3c-203ENSMUST00000163963 1617 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Hoxd8P23463 Spry1-203ENSMUST00000108109 2451 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Hoxd8P23463 Lrrc4b-201ENSMUST00000058667 2728 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Hoxd8P23463 Gnl1-201ENSMUST00000087200 2848 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Hoxd8P23463 Cdc37l1-205ENSMUST00000224599 1769 ntBASIC20.31■□□□□ 0.84
Hoxd8P23463 Gm12441-201ENSMUST00000121806 588 ntBASIC20.31■□□□□ 0.84
Hoxd8P23463 Ptbp3-204ENSMUST00000140925 606 ntTSL 3 BASIC20.31■□□□□ 0.84
Hoxd8P23463 Fxyd1-215ENSMUST00000206474 572 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Hoxd8P23463 Gm4968-201ENSMUST00000071458 858 ntBASIC20.31■□□□□ 0.84
Hoxd8P23463 Theg-202ENSMUST00000077433 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
Hoxd8P23463 Crlf3-203ENSMUST00000103233 2230 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Hoxd8P23463 Otud5-203ENSMUST00000115666 2471 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
Hoxd8P23463 5033417F24Rik-201ENSMUST00000181575 1787 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Hoxd8P23463 Fam49b-207ENSMUST00000228226 1896 ntAPPRIS P1 BASIC20.3■□□□□ 0.84
Retrieved 100 of 76,532 protein–RNA pairs in 38.4 ms