Protein–RNA interactions for Protein: O08983

Hps1, Hermansky-Pudlak syndrome 1 protein homolog, mousemouse

Predictions only

Length 704 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hps1O08983 Cnp-201ENSMUST00000103120 2357 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Hps1O08983 Camsap2-201ENSMUST00000048309 7823 ntAPPRIS P3 TSL 5 BASIC17.98■□□□□ 0.47
Hps1O08983 Tmem86a-201ENSMUST00000010451 1831 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Hps1O08983 Rasgrp2-206ENSMUST00000113472 2124 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Hps1O08983 Ahr-202ENSMUST00000116436 5548 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Hps1O08983 Stau2-217ENSMUST00000162751 3030 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Hps1O08983 Ube2e3-202ENSMUST00000121433 1235 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
Hps1O08983 Gm16253-201ENSMUST00000148290 550 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Hps1O08983 Gm45417-201ENSMUST00000209533 758 ntBASIC17.98■□□□□ 0.47
Hps1O08983 Tex264-202ENSMUST00000163441 1896 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Hps1O08983 Cpne2-202ENSMUST00000109537 2121 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Hps1O08983 Junb-201ENSMUST00000064922 1809 ntAPPRIS P1 BASIC17.98■□□□□ 0.47
Hps1O08983 Bmp6-201ENSMUST00000171970 3593 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Hps1O08983 Kl-201ENSMUST00000078856 5118 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Hps1O08983 Anapc5-208ENSMUST00000197719 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Hps1O08983 Tril-201ENSMUST00000127748 5363 ntAPPRIS P1 BASIC17.97■□□□□ 0.47
Hps1O08983 Jkamp-202ENSMUST00000117449 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Hps1O08983 Ctdsp2-202ENSMUST00000105256 4817 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Hps1O08983 Fbxo4-201ENSMUST00000022791 1565 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Hps1O08983 Dedd-203ENSMUST00000111299 2322 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Hps1O08983 Htr6-201ENSMUST00000068036 1362 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Hps1O08983 Stau2-203ENSMUST00000115359 1151 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Hps1O08983 Slc35b2-207ENSMUST00000226086 850 ntBASIC17.97■□□□□ 0.47
Hps1O08983 Ikzf1-202ENSMUST00000048122 911 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Hps1O08983 6330562C20Rik-201ENSMUST00000098867 784 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Hps1O08983 Rasl11b-201ENSMUST00000051937 1812 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Hps1O08983 Tsen34-202ENSMUST00000108627 1319 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Hps1O08983 Aktip-202ENSMUST00000120213 2200 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Hps1O08983 Hnrnpul2-201ENSMUST00000096753 5726 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Hps1O08983 Adrb1-201ENSMUST00000038949 2491 ntAPPRIS P1 BASIC17.96■□□□□ 0.47
Hps1O08983 Phf20l1-201ENSMUST00000048188 6670 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
Hps1O08983 Rab1a-203ENSMUST00000109602 2626 ntTSL 5 BASIC17.96■□□□□ 0.47
Hps1O08983 Tmem74b-202ENSMUST00000109872 1399 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Hps1O08983 Snx5-202ENSMUST00000110030 2512 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Hps1O08983 Ahcyl2-204ENSMUST00000115242 5152 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
Hps1O08983 Prrt2-206ENSMUST00000202045 429 ntTSL 5 BASIC17.96■□□□□ 0.47
Hps1O08983 Alad-201ENSMUST00000030090 1206 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Hps1O08983 Tsen54-201ENSMUST00000021134 1979 ntAPPRIS P2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Hps1O08983 Bend4-204ENSMUST00000201972 8268 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
Hps1O08983 Serbp1-207ENSMUST00000203436 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Hps1O08983 Anks6-202ENSMUST00000107747 3980 ntTSL 1 (best) BASIC17.96■□□□□ 0.46
Hps1O08983 Tnrc6c-202ENSMUST00000106344 8847 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.46
Hps1O08983 Tspan17-201ENSMUST00000026993 1585 ntAPPRIS P2 TSL 1 (best) BASIC17.96■□□□□ 0.46
Hps1O08983 Plxnd1-201ENSMUST00000015511 6907 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Hps1O08983 Ssbp4-201ENSMUST00000049908 1475 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Hps1O08983 Zbtb7a-202ENSMUST00000117956 1863 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Hps1O08983 Uhmk1-201ENSMUST00000027979 7864 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Hps1O08983 Smim10l2a-201ENSMUST00000068106 2393 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Hps1O08983 Gm10382-201ENSMUST00000100700 1233 ntAPPRIS P1 BASIC17.95■□□□□ 0.46
Hps1O08983 Zfp963-202ENSMUST00000154063 640 ntTSL 3 BASIC17.95■□□□□ 0.46
Hps1O08983 Rps2-ps10-202ENSMUST00000170335 965 ntBASIC17.95■□□□□ 0.46
Hps1O08983 Clec3b-201ENSMUST00000026890 992 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Hps1O08983 Ube2q2-201ENSMUST00000059555 3456 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
Hps1O08983 Enah-203ENSMUST00000111025 3385 ntAPPRIS ALT2 TSL 5 BASIC17.95■□□□□ 0.46
Hps1O08983 Agtpbp1-222ENSMUST00000171606 3037 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Hps1O08983 Itsn1-205ENSMUST00000113996 5147 ntTSL 5 BASIC17.94■□□□□ 0.46
Hps1O08983 Pelo-201ENSMUST00000109226 1600 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Hps1O08983 Cradd-205ENSMUST00000220279 1613 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Hps1O08983 Utp11-201ENSMUST00000030738 1603 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Hps1O08983 Spg7-209ENSMUST00000149248 2896 ntAPPRIS P2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Hps1O08983 Sorcs2-201ENSMUST00000037370 5707 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Hps1O08983 Nfix-204ENSMUST00000109764 5476 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Hps1O08983 Porcn-203ENSMUST00000089402 1839 ntAPPRIS ALT1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Hps1O08983 Sdsl-202ENSMUST00000052258 1225 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Hps1O08983 Proca1-201ENSMUST00000060539 960 ntAPPRIS ALT2 TSL 2 BASIC17.94■□□□□ 0.46
Hps1O08983 Asap2-204ENSMUST00000101562 5552 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Hps1O08983 Camk2b-201ENSMUST00000002817 1872 ntTSL 5 BASIC17.94■□□□□ 0.46
Hps1O08983 Dll3-201ENSMUST00000108315 2618 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Hps1O08983 Gm43545-201ENSMUST00000196765 2779 ntBASIC17.94■□□□□ 0.46
Hps1O08983 Map4k5-203ENSMUST00000110570 4498 ntAPPRIS P5 TSL 5 BASIC17.94■□□□□ 0.46
Hps1O08983 Ero1l-201ENSMUST00000022378 4418 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Hps1O08983 St7l-201ENSMUST00000059271 5728 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
Hps1O08983 Pdzd3-201ENSMUST00000034618 2193 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Hps1O08983 Gm20548-204ENSMUST00000174528 791 ntTSL 3 BASIC17.93■□□□□ 0.46
Hps1O08983 D630002J18Rik-201ENSMUST00000181854 1115 ntBASIC17.93■□□□□ 0.46
Hps1O08983 Ankrd11-207ENSMUST00000212937 943 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Hps1O08983 H2-Q2-201ENSMUST00000074806 1262 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Hps1O08983 Zbed3-202ENSMUST00000221807 1945 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Hps1O08983 Ercc6l2-208ENSMUST00000144763 1820 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Hps1O08983 Nectin3-201ENSMUST00000023334 3062 ntAPPRIS P4 TSL 1 (best) BASIC17.92■□□□□ 0.46
Hps1O08983 Ptger3-202ENSMUST00000173533 2097 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Hps1O08983 Ccdc34-201ENSMUST00000028580 2070 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Hps1O08983 Tedc1-201ENSMUST00000049271 2441 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Hps1O08983 Frrs1l-201ENSMUST00000053681 6817 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Hps1O08983 Neurl1b-201ENSMUST00000053020 6195 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Hps1O08983 Rims1-209ENSMUST00000218140 1434 ntTSL 5 BASIC17.92■□□□□ 0.46
Hps1O08983 Hoxb6-202ENSMUST00000173432 1964 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
Hps1O08983 Col4a3bp-202ENSMUST00000109444 5285 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Hps1O08983 2810001G20Rik-202ENSMUST00000146333 959 ntTSL 3 BASIC17.92■□□□□ 0.46
Hps1O08983 Bag1-204ENSMUST00000215842 1068 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
Hps1O08983 Ttc39b-201ENSMUST00000030205 842 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Hps1O08983 Pithd1-201ENSMUST00000105851 1700 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Hps1O08983 Sh3bp1-204ENSMUST00000109698 1923 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Hps1O08983 Slc9a7-201ENSMUST00000072451 2512 ntAPPRIS P2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Hps1O08983 Cpeb3-202ENSMUST00000123727 2411 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Hps1O08983 Gm13448-201ENSMUST00000143469 1847 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Hps1O08983 Lrrfip2-205ENSMUST00000196981 1839 ntAPPRIS ALT2 TSL 5 BASIC17.91■□□□□ 0.46
Hps1O08983 Slain2-202ENSMUST00000144843 4833 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Hps1O08983 Glp1r-201ENSMUST00000114574 1480 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Hps1O08983 Csnk1a1-201ENSMUST00000115246 1484 ntTSL 5 BASIC17.91■□□□□ 0.46
Retrieved 100 of 76,532 protein–RNA pairs in 39.7 ms