Protein–RNA interactions for Protein: E9PZP8

Herc1, HECT and RLD domain-containing E3 ubiquitin protein ligase family member 1, mousemouse

Predictions only

Length 4,859 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Herc1E9PZP8 Gm11539-201ENSMUST00000119837 557 ntBASIC11.27□□□□□ -0.6
Herc1E9PZP8 Gm13436-201ENSMUST00000120418 567 ntBASIC11.27□□□□□ -0.6
Herc1E9PZP8 Gm7075-201ENSMUST00000054760 425 ntAPPRIS P1 BASIC11.27□□□□□ -0.6
Herc1E9PZP8 Atf7ip2-204ENSMUST00000119023 1048 ntTSL 1 (best) BASIC11.27□□□□□ -0.6
Herc1E9PZP8 B930094E09Rik-201ENSMUST00000164667 1240 ntAPPRIS P1 BASIC11.27□□□□□ -0.6
Herc1E9PZP8 CT010467.1-202ENSMUST00000205406 714 ntBASIC11.27□□□□□ -0.6
Herc1E9PZP8 Gm38205-201ENSMUST00000192243 258 ntBASIC11.27□□□□□ -0.61
Herc1E9PZP8 Gm45618-201ENSMUST00000209890 660 ntAPPRIS P1 BASIC11.27□□□□□ -0.61
Herc1E9PZP8 Gm10489-201ENSMUST00000180511 1466 ntTSL 2 BASIC11.27□□□□□ -0.61
Herc1E9PZP8 Gm8784-201ENSMUST00000222096 1435 ntBASIC11.27□□□□□ -0.61
Herc1E9PZP8 Krtap1-4-201ENSMUST00000100479 593 ntAPPRIS P1 BASIC11.27□□□□□ -0.61
Herc1E9PZP8 Gm28033-201ENSMUST00000184224 96 ntBASIC11.27□□□□□ -0.61
Herc1E9PZP8 AC154471.1-201ENSMUST00000224418 436 ntBASIC11.27□□□□□ -0.61
Herc1E9PZP8 Grhpr-201ENSMUST00000045078 1280 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Herc1E9PZP8 Gm16505-202ENSMUST00000220976 1626 ntTSL 5 BASIC11.27□□□□□ -0.61
Herc1E9PZP8 Auh-201ENSMUST00000021913 1320 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Herc1E9PZP8 Gm13559-201ENSMUST00000120476 863 ntBASIC11.26□□□□□ -0.61
Herc1E9PZP8 Nsfl1c-202ENSMUST00000089140 1486 ntAPPRIS P3 TSL 5 BASIC11.26□□□□□ -0.61
Herc1E9PZP8 Cdh4-203ENSMUST00000108911 1208 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Herc1E9PZP8 Prmt1-210ENSMUST00000208829 621 ntTSL 5 BASIC11.26□□□□□ -0.61
Herc1E9PZP8 Gm45890-201ENSMUST00000212043 1026 ntTSL 5 BASIC11.26□□□□□ -0.61
Herc1E9PZP8 Thoc7-201ENSMUST00000065865 937 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Herc1E9PZP8 Jmjd7-201ENSMUST00000044675 1373 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Herc1E9PZP8 Cib1-207ENSMUST00000206084 772 ntTSL 3 BASIC11.26□□□□□ -0.61
Herc1E9PZP8 Cib1-202ENSMUST00000071457 702 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Herc1E9PZP8 Mboat4-201ENSMUST00000095345 1836 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Herc1E9PZP8 Capg-202ENSMUST00000114071 1400 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Herc1E9PZP8 Gm6190-201ENSMUST00000220683 1374 ntBASIC11.26□□□□□ -0.61
Herc1E9PZP8 Slbp-205ENSMUST00000139518 1191 ntAPPRIS ALT2 TSL 2 BASIC11.26□□□□□ -0.61
Herc1E9PZP8 Plekha3-201ENSMUST00000111920 2534 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Herc1E9PZP8 Speg-203ENSMUST00000113588 1078 ntTSL 5 BASIC11.25□□□□□ -0.61
Herc1E9PZP8 Spata25-201ENSMUST00000017911 786 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Herc1E9PZP8 Hist3h2ba-201ENSMUST00000078267 614 ntAPPRIS P1 BASIC11.25□□□□□ -0.61
Herc1E9PZP8 Aurkb-202ENSMUST00000108666 1831 ntAPPRIS P1 TSL 5 BASIC11.25□□□□□ -0.61
Herc1E9PZP8 Six3-201ENSMUST00000162695 2838 ntAPPRIS ALT2 TSL 5 BASIC11.25□□□□□ -0.61
Herc1E9PZP8 Mpc1-208ENSMUST00000155364 958 ntAPPRIS P1 TSL 2 BASIC11.25□□□□□ -0.61
Herc1E9PZP8 Hrh3-204ENSMUST00000165248 1224 ntAPPRIS ALT2 TSL 5 BASIC11.25□□□□□ -0.61
Herc1E9PZP8 AC175538.1-201ENSMUST00000225343 1269 ntBASIC11.25□□□□□ -0.61
Herc1E9PZP8 Fdps-203ENSMUST00000196709 1382 ntAPPRIS P1 TSL 5 BASIC11.25□□□□□ -0.61
Herc1E9PZP8 Cln6-201ENSMUST00000034776 2142 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Herc1E9PZP8 Gtf3a-204ENSMUST00000146511 1298 ntAPPRIS P5 TSL 1 (best) BASIC11.25□□□□□ -0.61
Herc1E9PZP8 Hnrnpa0-201ENSMUST00000007980 2678 ntAPPRIS P1 BASIC11.25□□□□□ -0.61
Herc1E9PZP8 CT030146.1-201ENSMUST00000220919 217 ntBASIC11.25□□□□□ -0.61
Herc1E9PZP8 Bcl10-201ENSMUST00000029842 1949 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Herc1E9PZP8 Scn1b-203ENSMUST00000211945 1501 ntAPPRIS P1 TSL 5 BASIC11.25□□□□□ -0.61
Herc1E9PZP8 Junb-201ENSMUST00000064922 1809 ntAPPRIS P1 BASIC11.24□□□□□ -0.61
Herc1E9PZP8 Thra-201ENSMUST00000064187 2452 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Herc1E9PZP8 Gm1673-202ENSMUST00000114382 451 ntAPPRIS ALT2 TSL 2 BASIC11.24□□□□□ -0.61
Herc1E9PZP8 Exosc3-201ENSMUST00000030003 1077 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Herc1E9PZP8 Aatf-201ENSMUST00000018841 1822 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Herc1E9PZP8 Zfp467-208ENSMUST00000114564 626 ntTSL 2 BASIC11.24□□□□□ -0.61
Herc1E9PZP8 Pym1-201ENSMUST00000065210 1156 ntAPPRIS ALT2 TSL 1 (best) BASIC11.24□□□□□ -0.61
Herc1E9PZP8 Hexdc-201ENSMUST00000038831 2378 ntAPPRIS ALT2 TSL 5 BASIC11.24□□□□□ -0.61
Herc1E9PZP8 Fance-204ENSMUST00000114804 1842 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Herc1E9PZP8 Manf-202ENSMUST00000159283 2247 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Herc1E9PZP8 Fbxl5-205ENSMUST00000121736 2144 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Herc1E9PZP8 Prss27-201ENSMUST00000059482 1253 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Herc1E9PZP8 Rplp2-201ENSMUST00000084434 964 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Herc1E9PZP8 Gm6934-201ENSMUST00000194780 1905 ntBASIC11.23□□□□□ -0.61
Herc1E9PZP8 Ankrd9-201ENSMUST00000043459 1706 ntAPPRIS P2 TSL 1 (best) BASIC11.23□□□□□ -0.61
Herc1E9PZP8 Otx2-204ENSMUST00000122009 1737 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Herc1E9PZP8 Lypd3-201ENSMUST00000080718 1649 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Herc1E9PZP8 Bad-202ENSMUST00000113423 990 ntAPPRIS ALT2 TSL 1 (best) BASIC11.23□□□□□ -0.61
Herc1E9PZP8 Isoc1-201ENSMUST00000025503 2563 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Herc1E9PZP8 Trim54-201ENSMUST00000013771 1434 ntAPPRIS P2 TSL 1 (best) BASIC11.23□□□□□ -0.61
Herc1E9PZP8 Gm11762-201ENSMUST00000135630 1705 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Herc1E9PZP8 Prrt1-201ENSMUST00000015620 1940 ntAPPRIS P1 TSL 5 BASIC11.23□□□□□ -0.61
Herc1E9PZP8 Hmga1-205ENSMUST00000118599 529 ntAPPRIS P3 TSL 3 BASIC11.23□□□□□ -0.61
Herc1E9PZP8 Sct-202ENSMUST00000167790 507 ntAPPRIS P3 TSL 1 (best) BASIC11.23□□□□□ -0.61
Herc1E9PZP8 Gm2559-201ENSMUST00000201323 363 ntBASIC11.23□□□□□ -0.61
Herc1E9PZP8 Bax-201ENSMUST00000033093 867 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Herc1E9PZP8 Sct-201ENSMUST00000046156 534 ntAPPRIS ALT2 TSL 1 (best) BASIC11.23□□□□□ -0.61
Herc1E9PZP8 Ndufs2-201ENSMUST00000013737 1623 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Herc1E9PZP8 Lat-201ENSMUST00000032997 1235 ntAPPRIS P2 TSL 1 (best) BASIC11.22□□□□□ -0.61
Herc1E9PZP8 Mlf2-201ENSMUST00000032214 1451 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Herc1E9PZP8 Gm13509-201ENSMUST00000119733 1308 ntBASIC11.22□□□□□ -0.61
Herc1E9PZP8 Fbxl15-201ENSMUST00000026256 1348 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Herc1E9PZP8 Tmem189-201ENSMUST00000006587 2329 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Herc1E9PZP8 AW822252-206ENSMUST00000208904 237 ntBASIC11.22□□□□□ -0.61
Herc1E9PZP8 Frat2-201ENSMUST00000059231 2161 ntAPPRIS P1 BASIC11.22□□□□□ -0.61
Herc1E9PZP8 Lce1j-201ENSMUST00000107304 420 ntAPPRIS P1 BASIC11.22□□□□□ -0.61
Herc1E9PZP8 Gm7284-201ENSMUST00000131667 944 ntBASIC11.22□□□□□ -0.61
Herc1E9PZP8 Tm2d1-201ENSMUST00000030292 952 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Herc1E9PZP8 Gm9803-201ENSMUST00000057649 563 ntAPPRIS P1 BASIC11.22□□□□□ -0.61
Herc1E9PZP8 Gm15545-202ENSMUST00000141011 899 ntTSL 3 BASIC11.21□□□□□ -0.61
Herc1E9PZP8 Aldoa-ps3-201ENSMUST00000217558 306 ntBASIC11.21□□□□□ -0.61
Herc1E9PZP8 1700020N01Rik-201ENSMUST00000057341 1062 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Herc1E9PZP8 Ttc32-202ENSMUST00000219470 1645 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Herc1E9PZP8 Tmem222-201ENSMUST00000105907 1484 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Herc1E9PZP8 Gpatch3-201ENSMUST00000030662 2004 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Herc1E9PZP8 Zdhhc12-202ENSMUST00000102865 1165 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Herc1E9PZP8 Gm45337-201ENSMUST00000210537 1267 ntAPPRIS P1 BASIC11.21□□□□□ -0.61
Herc1E9PZP8 Mpst-203ENSMUST00000169133 1309 ntAPPRIS P1 TSL 5 BASIC11.21□□□□□ -0.62
Herc1E9PZP8 Fam159b-201ENSMUST00000043061 1310 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Herc1E9PZP8 AC107452.1-201ENSMUST00000227963 481 ntBASIC11.21□□□□□ -0.62
Herc1E9PZP8 Il17a-201ENSMUST00000027061 1171 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Herc1E9PZP8 Gm8587-201ENSMUST00000076538 843 ntBASIC11.21□□□□□ -0.62
Herc1E9PZP8 Trim27-207ENSMUST00000223065 2046 ntTSL 1 (best) BASIC11.21□□□□□ -0.62
Herc1E9PZP8 Spint2-202ENSMUST00000108236 1211 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Herc1E9PZP8 Cdkn1c-201ENSMUST00000037287 1901 ntAPPRIS P3 TSL 1 (best) BASIC11.2□□□□□ -0.62
Retrieved 100 of 76,532 protein–RNA pairs in 32.9 ms