Protein–RNA interactions for Protein: A0A0B4J1J1

Igkv5-45, Immunoglobulin kappa chain variable 5-45 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Igkv5-45A0A0B4J1J1 Gm15908-201ENSMUST00000154345 1091 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Igkv5-45A0A0B4J1J1 Kctd17-206ENSMUST00000162517 901 ntAPPRIS P4 TSL 1 (best) BASIC20.16■□□□□ 0.82
Igkv5-45A0A0B4J1J1 Kctd17-209ENSMUST00000166142 826 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
Igkv5-45A0A0B4J1J1 4930519P11Rik-201ENSMUST00000181369 501 ntAPPRIS P1 BASIC20.16■□□□□ 0.82
Igkv5-45A0A0B4J1J1 Gm9988-201ENSMUST00000069786 435 ntBASIC20.16■□□□□ 0.82
Igkv5-45A0A0B4J1J1 Riox1-201ENSMUST00000053744 2344 ntAPPRIS P1 BASIC20.16■□□□□ 0.82
Igkv5-45A0A0B4J1J1 Reep4-203ENSMUST00000226563 1444 ntBASIC20.16■□□□□ 0.82
Igkv5-45A0A0B4J1J1 2410004B18Rik-201ENSMUST00000039571 1547 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Igkv5-45A0A0B4J1J1 Fam168b-203ENSMUST00000167518 5058 ntTSL 5 BASIC20.16■□□□□ 0.82
Igkv5-45A0A0B4J1J1 5033417F24Rik-201ENSMUST00000181575 1787 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Igkv5-45A0A0B4J1J1 Ung-202ENSMUST00000102584 2136 ntAPPRIS P3 TSL 1 (best) BASIC20.15■□□□□ 0.82
Igkv5-45A0A0B4J1J1 Bspry-202ENSMUST00000107449 2167 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
Igkv5-45A0A0B4J1J1 1700017B05Rik-204ENSMUST00000215298 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
Igkv5-45A0A0B4J1J1 Ptrh1-201ENSMUST00000066352 952 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Igkv5-45A0A0B4J1J1 Rab34-202ENSMUST00000056241 1558 ntTSL 5 BASIC20.15■□□□□ 0.82
Igkv5-45A0A0B4J1J1 Lypd3-201ENSMUST00000080718 1649 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Igkv5-45A0A0B4J1J1 Eml4-201ENSMUST00000049503 5109 ntAPPRIS P3 TSL 1 (best) BASIC20.15■□□□□ 0.82
Igkv5-45A0A0B4J1J1 Rab5c-201ENSMUST00000019317 1967 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Igkv5-45A0A0B4J1J1 Kcnip2-202ENSMUST00000079431 2302 ntAPPRIS ALT1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Igkv5-45A0A0B4J1J1 Asph-217ENSMUST00000146441 2576 ntTSL 1 (best) BASIC20.14■□□□□ 0.82
Igkv5-45A0A0B4J1J1 Rgs19-202ENSMUST00000108769 1460 ntTSL 2 BASIC20.14■□□□□ 0.81
Igkv5-45A0A0B4J1J1 Dlx6-203ENSMUST00000171311 1071 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Igkv5-45A0A0B4J1J1 AV026068-204ENSMUST00000186214 633 ntTSL 2 BASIC20.14■□□□□ 0.81
Igkv5-45A0A0B4J1J1 Gm42569-201ENSMUST00000200539 472 ntBASIC20.14■□□□□ 0.81
Igkv5-45A0A0B4J1J1 Ltb-201ENSMUST00000025262 1160 ntAPPRIS P2 TSL 1 (best) BASIC20.14■□□□□ 0.81
Igkv5-45A0A0B4J1J1 Uba2-201ENSMUST00000102746 2579 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Igkv5-45A0A0B4J1J1 Atoh8-201ENSMUST00000042646 2355 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Igkv5-45A0A0B4J1J1 Cyp2r1-207ENSMUST00000211506 1887 ntTSL 5 BASIC20.13■□□□□ 0.81
Igkv5-45A0A0B4J1J1 Gm20100-201ENSMUST00000209418 2272 ntBASIC20.13■□□□□ 0.81
Igkv5-45A0A0B4J1J1 Kctd9-201ENSMUST00000078053 3157 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Igkv5-45A0A0B4J1J1 Arhgef26-201ENSMUST00000079300 5638 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Igkv5-45A0A0B4J1J1 Gpx4-202ENSMUST00000105372 959 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Igkv5-45A0A0B4J1J1 Gm13234-201ENSMUST00000120010 747 ntBASIC20.13■□□□□ 0.81
Igkv5-45A0A0B4J1J1 P4hb-203ENSMUST00000168360 770 ntTSL 3 BASIC20.13■□□□□ 0.81
Igkv5-45A0A0B4J1J1 Neurl1b-203ENSMUST00000183077 1084 ntTSL 5 BASIC20.13■□□□□ 0.81
Igkv5-45A0A0B4J1J1 Gm42778-201ENSMUST00000199644 553 ntBASIC20.13■□□□□ 0.81
Igkv5-45A0A0B4J1J1 Gm18671-201ENSMUST00000214826 683 ntBASIC20.13■□□□□ 0.81
Igkv5-45A0A0B4J1J1 AC164629.5-201ENSMUST00000220387 632 ntBASIC20.13■□□□□ 0.81
Igkv5-45A0A0B4J1J1 Dtnbp1-208ENSMUST00000222805 1231 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Igkv5-45A0A0B4J1J1 Sys1-202ENSMUST00000109352 2001 ntAPPRIS P1 TSL 5 BASIC20.13■□□□□ 0.81
Igkv5-45A0A0B4J1J1 Lsr-205ENSMUST00000205961 2021 ntAPPRIS P3 TSL 1 (best) BASIC20.13■□□□□ 0.81
Igkv5-45A0A0B4J1J1 Zbed3-201ENSMUST00000045909 1894 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Igkv5-45A0A0B4J1J1 Tcp11-203ENSMUST00000114836 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
Igkv5-45A0A0B4J1J1 Pom121-201ENSMUST00000111171 5580 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Igkv5-45A0A0B4J1J1 Ctnnd2-201ENSMUST00000081728 5944 ntAPPRIS P2 TSL 1 (best) BASIC20.12■□□□□ 0.81
Igkv5-45A0A0B4J1J1 1110032F04Rik-201ENSMUST00000054551 2578 ntAPPRIS P1 BASIC20.12■□□□□ 0.81
Igkv5-45A0A0B4J1J1 Hsd17b2-201ENSMUST00000034304 1320 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Igkv5-45A0A0B4J1J1 Kcng2-201ENSMUST00000077962 2813 ntAPPRIS P1 TSL 5 BASIC20.12■□□□□ 0.81
Igkv5-45A0A0B4J1J1 1810059C17Rik-201ENSMUST00000125173 487 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Igkv5-45A0A0B4J1J1 Gm27405-201ENSMUST00000184201 112 ntBASIC20.12■□□□□ 0.81
Igkv5-45A0A0B4J1J1 AV026068-208ENSMUST00000189098 286 ntTSL 5 BASIC20.12■□□□□ 0.81
Igkv5-45A0A0B4J1J1 Ngb-203ENSMUST00000110177 1611 ntAPPRIS ALT1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Igkv5-45A0A0B4J1J1 Picalm-212ENSMUST00000208730 3427 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Igkv5-45A0A0B4J1J1 Set-201ENSMUST00000067996 2834 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
Igkv5-45A0A0B4J1J1 Glipr2-201ENSMUST00000030202 2320 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Igkv5-45A0A0B4J1J1 Klhl32-201ENSMUST00000084781 2287 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Igkv5-45A0A0B4J1J1 Pkmyt1-201ENSMUST00000024701 2039 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Igkv5-45A0A0B4J1J1 Gm7291-201ENSMUST00000199147 382 ntBASIC20.11■□□□□ 0.81
Igkv5-45A0A0B4J1J1 AV356131-201ENSMUST00000206201 750 ntBASIC20.11■□□□□ 0.81
Igkv5-45A0A0B4J1J1 E130116L18Rik-201ENSMUST00000066954 306 ntAPPRIS P1 BASIC20.11■□□□□ 0.81
Igkv5-45A0A0B4J1J1 Dusp26-205ENSMUST00000170204 1627 ntAPPRIS P1 TSL 5 BASIC20.11■□□□□ 0.81
Igkv5-45A0A0B4J1J1 Htr7-201ENSMUST00000099505 1606 ntTSL 5 BASIC20.11■□□□□ 0.81
Igkv5-45A0A0B4J1J1 Rell2-202ENSMUST00000091932 1995 ntTSL 2 BASIC20.11■□□□□ 0.81
Igkv5-45A0A0B4J1J1 Syt5-201ENSMUST00000065957 1750 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Igkv5-45A0A0B4J1J1 Stau2-217ENSMUST00000162751 3030 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Igkv5-45A0A0B4J1J1 Cirbp-202ENSMUST00000105365 1321 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Igkv5-45A0A0B4J1J1 Cck-203ENSMUST00000215228 783 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Igkv5-45A0A0B4J1J1 H2-Ab1-201ENSMUST00000040828 1211 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Igkv5-45A0A0B4J1J1 B230217C12Rik-201ENSMUST00000054783 1189 ntAPPRIS P1 TSL 5 BASIC20.1■□□□□ 0.81
Igkv5-45A0A0B4J1J1 6820408C15Rik-201ENSMUST00000039961 1684 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Igkv5-45A0A0B4J1J1 Rell2-210ENSMUST00000176104 2150 ntAPPRIS P1 TSL 5 BASIC20.1■□□□□ 0.81
Igkv5-45A0A0B4J1J1 Uba5-201ENSMUST00000035166 2404 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Igkv5-45A0A0B4J1J1 Zfp105-201ENSMUST00000051667 2010 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Igkv5-45A0A0B4J1J1 Ttc39a-203ENSMUST00000106619 1778 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Igkv5-45A0A0B4J1J1 Polr2j-202ENSMUST00000111127 900 ntTSL 2 BASIC20.09■□□□□ 0.81
Igkv5-45A0A0B4J1J1 Gadd45b-201ENSMUST00000015456 1284 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Igkv5-45A0A0B4J1J1 Faim-201ENSMUST00000035038 1019 ntAPPRIS P3 TSL 1 (best) BASIC20.09■□□□□ 0.81
Igkv5-45A0A0B4J1J1 Rasl10a-201ENSMUST00000037218 1110 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Igkv5-45A0A0B4J1J1 Meis3-201ENSMUST00000002495 1731 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Igkv5-45A0A0B4J1J1 Vgf-202ENSMUST00000186451 2277 ntAPPRIS P1 TSL 5 BASIC20.09■□□□□ 0.81
Igkv5-45A0A0B4J1J1 Fezf2-201ENSMUST00000022262 2188 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Igkv5-45A0A0B4J1J1 Tmem250-ps-201ENSMUST00000133808 2483 ntTSL 2 BASIC20.08■□□□□ 0.81
Igkv5-45A0A0B4J1J1 Polr1d-202ENSMUST00000110557 1137 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
Igkv5-45A0A0B4J1J1 Gm36033-202ENSMUST00000214827 745 ntTSL 2 BASIC20.08■□□□□ 0.81
Igkv5-45A0A0B4J1J1 Ccdc84-211ENSMUST00000217270 681 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
Igkv5-45A0A0B4J1J1 Gar1-201ENSMUST00000029643 1271 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Igkv5-45A0A0B4J1J1 Vkorc1l1-202ENSMUST00000073945 650 ntTSL 2 BASIC20.08■□□□□ 0.81
Igkv5-45A0A0B4J1J1 Gm10306-201ENSMUST00000094969 533 ntAPPRIS P1 BASIC20.08■□□□□ 0.81
Igkv5-45A0A0B4J1J1 Pbx1-206ENSMUST00000176790 1828 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
Igkv5-45A0A0B4J1J1 Pdcd7-201ENSMUST00000048184 2419 ntAPPRIS P2 TSL 1 (best) BASIC20.07■□□□□ 0.8
Igkv5-45A0A0B4J1J1 Mtfr1l-201ENSMUST00000102550 2025 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Igkv5-45A0A0B4J1J1 Smurf2-202ENSMUST00000103067 5290 ntTSL 5 BASIC20.07■□□□□ 0.8
Igkv5-45A0A0B4J1J1 Pan3-201ENSMUST00000031651 5048 ntAPPRIS P2 TSL 5 BASIC20.07■□□□□ 0.8
Igkv5-45A0A0B4J1J1 Dpyd-204ENSMUST00000149101 531 ntTSL 3 BASIC20.07■□□□□ 0.8
Igkv5-45A0A0B4J1J1 Nrg3-203ENSMUST00000173780 2137 ntAPPRIS ALT2 TSL 5 BASIC20.07■□□□□ 0.8
Igkv5-45A0A0B4J1J1 Dap-205ENSMUST00000186547 535 ntTSL 3 BASIC20.07■□□□□ 0.8
Igkv5-45A0A0B4J1J1 Mpzl1-210ENSMUST00000194437 643 ntTSL 3 BASIC20.07■□□□□ 0.8
Igkv5-45A0A0B4J1J1 Camkk2-202ENSMUST00000196742 1084 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Igkv5-45A0A0B4J1J1 Gm45890-202ENSMUST00000212188 1052 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Igkv5-45A0A0B4J1J1 1700081N11Rik-202ENSMUST00000221447 569 ntTSL 3 BASIC20.07■□□□□ 0.8
Retrieved 100 of 76,532 protein–RNA pairs in 70.4 ms