Protein–RNA interactions for Protein: Q9DC33

Hmg20a, High mobility group protein 20A, mousemouse

Predictions only

Length 346 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmg20aQ9DC33 Smarca4-201ENSMUST00000034707 6354 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
Hmg20aQ9DC33 Bag5-202ENSMUST00000160576 1852 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Hmg20aQ9DC33 Fgf3-201ENSMUST00000105898 2299 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
Hmg20aQ9DC33 Ctsz-201ENSMUST00000016400 1441 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
Hmg20aQ9DC33 U2af2-209ENSMUST00000209099 2088 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.45
Hmg20aQ9DC33 Aen-202ENSMUST00000107423 2230 ntAPPRIS P3 TSL 5 BASIC17.89■□□□□ 0.45
Hmg20aQ9DC33 Klhl32-201ENSMUST00000084781 2287 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Hmg20aQ9DC33 Nfe2-201ENSMUST00000075192 1697 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Hmg20aQ9DC33 Gm7628-201ENSMUST00000134690 2010 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Hmg20aQ9DC33 Pitx1-201ENSMUST00000021968 2451 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Hmg20aQ9DC33 Tesmin-201ENSMUST00000025840 2234 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
Hmg20aQ9DC33 Rab3ip-201ENSMUST00000020375 2690 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Hmg20aQ9DC33 Ncor1-203ENSMUST00000069456 3171 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Hmg20aQ9DC33 Papola-212ENSMUST00000168186 2436 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Hmg20aQ9DC33 Chtop-202ENSMUST00000049937 2012 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Hmg20aQ9DC33 Crocc-201ENSMUST00000040222 6248 ntTSL 5 BASIC17.88■□□□□ 0.45
Hmg20aQ9DC33 Gm10612-201ENSMUST00000162198 1681 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Hmg20aQ9DC33 Myo1b-203ENSMUST00000114537 4618 ntTSL 5 BASIC17.88■□□□□ 0.45
Hmg20aQ9DC33 Gm16049-201ENSMUST00000155166 616 ntTSL 3 BASIC17.88■□□□□ 0.45
Hmg20aQ9DC33 Psme3-201ENSMUST00000019470 2664 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Hmg20aQ9DC33 Ffar4-201ENSMUST00000067098 1393 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Hmg20aQ9DC33 Gm43909-201ENSMUST00000203443 1876 ntBASIC17.88■□□□□ 0.45
Hmg20aQ9DC33 Lhfp-201ENSMUST00000059562 2108 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Hmg20aQ9DC33 Baiap2-202ENSMUST00000075180 3518 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
Hmg20aQ9DC33 Rnf166-201ENSMUST00000014614 1783 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Hmg20aQ9DC33 Prmt3-201ENSMUST00000032715 2507 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Hmg20aQ9DC33 Rpl38-203ENSMUST00000106599 457 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Hmg20aQ9DC33 Lsm4-205ENSMUST00000210987 636 ntTSL 5 BASIC17.87■□□□□ 0.45
Hmg20aQ9DC33 Mtmr14-201ENSMUST00000113146 2676 ntAPPRIS P2 TSL 1 (best) BASIC17.87■□□□□ 0.45
Hmg20aQ9DC33 Rbfa-201ENSMUST00000025462 1377 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Hmg20aQ9DC33 Lhx8-201ENSMUST00000177846 2076 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Hmg20aQ9DC33 Gm45606-201ENSMUST00000209836 2795 ntBASIC17.87■□□□□ 0.45
Hmg20aQ9DC33 Alyref-201ENSMUST00000026125 3527 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Hmg20aQ9DC33 Nsmce4a-202ENSMUST00000160289 1435 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Hmg20aQ9DC33 Fra10ac1-201ENSMUST00000067167 1402 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Hmg20aQ9DC33 Grk6-206ENSMUST00000224995 2971 ntBASIC17.87■□□□□ 0.45
Hmg20aQ9DC33 Tmem230-206ENSMUST00000180286 1531 ntAPPRIS P1 TSL 2 BASIC17.87■□□□□ 0.45
Hmg20aQ9DC33 Tarbp1-201ENSMUST00000170518 6383 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
Hmg20aQ9DC33 Ythdf3-201ENSMUST00000108345 5102 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Hmg20aQ9DC33 Kansl1l-201ENSMUST00000068168 4459 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Hmg20aQ9DC33 AC126028.2-201ENSMUST00000228100 1833 ntBASIC17.86■□□□□ 0.45
Hmg20aQ9DC33 Mfhas1-201ENSMUST00000037666 6408 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Hmg20aQ9DC33 Dus1l-203ENSMUST00000106135 1863 ntAPPRIS ALT2 TSL 5 BASIC17.86■□□□□ 0.45
Hmg20aQ9DC33 Hoxc11-201ENSMUST00000001701 2021 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Hmg20aQ9DC33 Mtfmt-201ENSMUST00000074792 2042 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Hmg20aQ9DC33 Vmn1r17-201ENSMUST00000227186 2234 ntAPPRIS P2 BASIC17.86■□□□□ 0.45
Hmg20aQ9DC33 D130058E05Rik-201ENSMUST00000173856 1372 ntTSL 2 BASIC17.86■□□□□ 0.45
Hmg20aQ9DC33 Nkx2-5-201ENSMUST00000015723 1525 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Hmg20aQ9DC33 Gm26884-201ENSMUST00000181207 3074 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Hmg20aQ9DC33 Enpp1-202ENSMUST00000105520 6777 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
Hmg20aQ9DC33 Homer2-201ENSMUST00000026922 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Hmg20aQ9DC33 Actr3b-201ENSMUST00000088244 1712 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Hmg20aQ9DC33 Asap2-204ENSMUST00000101562 5552 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Hmg20aQ9DC33 Pqlc1-201ENSMUST00000070135 1911 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Hmg20aQ9DC33 B4galt4-205ENSMUST00000114712 2168 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Hmg20aQ9DC33 Mrm1-201ENSMUST00000018549 2477 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Hmg20aQ9DC33 Agap3-205ENSMUST00000199856 2685 ntTSL 5 BASIC17.85■□□□□ 0.45
Hmg20aQ9DC33 Nsun2-202ENSMUST00000109699 2834 ntAPPRIS P2 TSL 1 (best) BASIC17.85■□□□□ 0.45
Hmg20aQ9DC33 Eomes-202ENSMUST00000111763 2869 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
Hmg20aQ9DC33 Satb1-211ENSMUST00000152830 5993 ntAPPRIS P2 TSL 2 BASIC17.85■□□□□ 0.45
Hmg20aQ9DC33 Sept9-201ENSMUST00000019038 3784 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
Hmg20aQ9DC33 Nptxr-201ENSMUST00000023057 5004 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
Hmg20aQ9DC33 Rasgrp1-201ENSMUST00000102534 5229 ntAPPRIS P1 TSL 5 BASIC17.85■□□□□ 0.45
Hmg20aQ9DC33 Trim47-202ENSMUST00000106441 2192 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
Hmg20aQ9DC33 Hnrnpul1-202ENSMUST00000108401 1240 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Hmg20aQ9DC33 Donson-202ENSMUST00000114031 2147 ntAPPRIS ALT2 TSL 5 BASIC17.85■□□□□ 0.45
Hmg20aQ9DC33 Pmpca-202ENSMUST00000114093 1638 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Hmg20aQ9DC33 Nipa2-202ENSMUST00000117812 3039 ntAPPRIS P1 TSL 2 BASIC17.85■□□□□ 0.45
Hmg20aQ9DC33 Hdgfl3-201ENSMUST00000026094 2865 ntAPPRIS ALT1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Hmg20aQ9DC33 Clpp-201ENSMUST00000002735 1207 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Hmg20aQ9DC33 Rbm24-201ENSMUST00000037923 3086 ntAPPRIS P1 TSL 2 BASIC17.85■□□□□ 0.45
Hmg20aQ9DC33 Mzt1-201ENSMUST00000042662 2240 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Hmg20aQ9DC33 Fbxl5-201ENSMUST00000047857 2858 ntAPPRIS P2 TSL 1 (best) BASIC17.85■□□□□ 0.45
Hmg20aQ9DC33 Icmt-201ENSMUST00000048892 4919 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Hmg20aQ9DC33 Ahr-202ENSMUST00000116436 5548 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Hmg20aQ9DC33 Foxj1-201ENSMUST00000036215 2623 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Hmg20aQ9DC33 Gm44832-201ENSMUST00000208849 2303 ntBASIC17.84■□□□□ 0.45
Hmg20aQ9DC33 AC122335.2-201ENSMUST00000213901 6181 ntBASIC17.84■□□□□ 0.45
Hmg20aQ9DC33 Atp11a-202ENSMUST00000091237 7443 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
Hmg20aQ9DC33 Txnrd2-213ENSMUST00000178093 1785 ntTSL 5 BASIC17.84■□□□□ 0.45
Hmg20aQ9DC33 Ttc19-201ENSMUST00000050646 3410 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
Hmg20aQ9DC33 Tusc3-201ENSMUST00000167992 1511 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Hmg20aQ9DC33 Lemd3-201ENSMUST00000119093 4370 ntAPPRIS ALT2 TSL 2 BASIC17.84■□□□□ 0.45
Hmg20aQ9DC33 Tmem55b-205ENSMUST00000160835 2755 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
Hmg20aQ9DC33 Nfix-204ENSMUST00000109764 5476 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Hmg20aQ9DC33 Ssc4d-204ENSMUST00000111153 2745 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
Hmg20aQ9DC33 Sike1-202ENSMUST00000119450 774 ntTSL 3 BASIC17.84■□□□□ 0.45
Hmg20aQ9DC33 Pdlim4-201ENSMUST00000018755 1182 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Hmg20aQ9DC33 Rab42-201ENSMUST00000040411 761 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Hmg20aQ9DC33 Dcun1d1-201ENSMUST00000108182 4980 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Hmg20aQ9DC33 Ache-209ENSMUST00000196208 1911 ntTSL 5 BASIC17.84■□□□□ 0.45
Hmg20aQ9DC33 Igfbpl1-201ENSMUST00000044297 2864 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Hmg20aQ9DC33 Fem1c-201ENSMUST00000036226 5726 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Hmg20aQ9DC33 Ttc34-203ENSMUST00000207854 4733 ntAPPRIS ALT2 TSL 5 BASIC17.84■□□□□ 0.45
Hmg20aQ9DC33 Cpsf4-202ENSMUST00000160422 1756 ntAPPRIS ALT1 TSL 5 BASIC17.84■□□□□ 0.45
Hmg20aQ9DC33 Vim-206ENSMUST00000193675 1777 ntAPPRIS ALT2 TSL 5 BASIC17.84■□□□□ 0.45
Hmg20aQ9DC33 Pnldc1-201ENSMUST00000163394 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Hmg20aQ9DC33 Smarcc1-207ENSMUST00000199896 5773 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.45
Hmg20aQ9DC33 Gab1-202ENSMUST00000210676 4985 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
Hmg20aQ9DC33 Mfsd14a-201ENSMUST00000029570 2782 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Retrieved 100 of 76,532 protein–RNA pairs in 46.5 ms