Protein–RNA interactions for Protein: Q8VE18

Smg8, Protein SMG8, mousemouse

Predictions only

Length 991 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smg8Q8VE18 3110053B16Rik-202ENSMUST00000140360 2004 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
Smg8Q8VE18 Arhgap23-201ENSMUST00000093940 2409 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
Smg8Q8VE18 Bin1-201ENSMUST00000025239 2451 ntAPPRIS P3 TSL 2 BASIC21.04■□□□□ 0.96
Smg8Q8VE18 Lhx2-201ENSMUST00000000253 2840 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Smg8Q8VE18 1810059C17Rik-201ENSMUST00000125173 487 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Smg8Q8VE18 Kctd17-206ENSMUST00000162517 901 ntAPPRIS P4 TSL 1 (best) BASIC21.04■□□□□ 0.96
Smg8Q8VE18 Kctd17-209ENSMUST00000166142 826 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
Smg8Q8VE18 Gm4553-201ENSMUST00000168049 714 ntAPPRIS ALT2 BASIC21.04■□□□□ 0.96
Smg8Q8VE18 Cck-203ENSMUST00000215228 783 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Smg8Q8VE18 Sfmbt2-204ENSMUST00000114864 1901 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Smg8Q8VE18 M5C1000I18Rik-202ENSMUST00000186205 1414 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Smg8Q8VE18 Sept4-206ENSMUST00000122067 1303 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Smg8Q8VE18 Ankrd33b-203ENSMUST00000110410 2070 ntAPPRIS P3 TSL 1 (best) BASIC21.03■□□□□ 0.96
Smg8Q8VE18 Zbtb7a-202ENSMUST00000117956 1863 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Smg8Q8VE18 Lemd3-202ENSMUST00000119944 4743 ntAPPRIS P2 TSL 1 (best) BASIC21.03■□□□□ 0.96
Smg8Q8VE18 Dpy19l1-206ENSMUST00000170356 4715 ntAPPRIS P1 TSL 5 BASIC21.03■□□□□ 0.96
Smg8Q8VE18 Derl2-207ENSMUST00000171041 1466 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
Smg8Q8VE18 Gm5297-201ENSMUST00000198555 1171 ntBASIC21.03■□□□□ 0.96
Smg8Q8VE18 Faim-201ENSMUST00000035038 1019 ntAPPRIS P3 TSL 1 (best) BASIC21.03■□□□□ 0.96
Smg8Q8VE18 Gfi1-202ENSMUST00000065478 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
Smg8Q8VE18 Reep4-203ENSMUST00000226563 1444 ntBASIC21.03■□□□□ 0.96
Smg8Q8VE18 Faap24-201ENSMUST00000032704 1857 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Smg8Q8VE18 Noa1-201ENSMUST00000047860 2288 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Smg8Q8VE18 Dpyd-204ENSMUST00000149101 531 ntTSL 3 BASIC21.02■□□□□ 0.96
Smg8Q8VE18 Gadd45b-201ENSMUST00000015456 1284 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Smg8Q8VE18 Gm29442-201ENSMUST00000188725 724 ntTSL 3 BASIC21.02■□□□□ 0.96
Smg8Q8VE18 Rasl10a-201ENSMUST00000037218 1110 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Smg8Q8VE18 Cant1-205ENSMUST00000106289 1600 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
Smg8Q8VE18 Sapcd2-203ENSMUST00000114293 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.96
Smg8Q8VE18 Eml4-201ENSMUST00000049503 5109 ntAPPRIS P3 TSL 1 (best) BASIC21.02■□□□□ 0.96
Smg8Q8VE18 Pnck-202ENSMUST00000114472 1532 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Smg8Q8VE18 Uckl1os-201ENSMUST00000122831 2018 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
Smg8Q8VE18 Rab7-205ENSMUST00000113600 2159 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
Smg8Q8VE18 Rnf32-204ENSMUST00000160246 1565 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
Smg8Q8VE18 Usp2-202ENSMUST00000065461 2057 ntAPPRIS P2 TSL 1 (best) BASIC21.01■□□□□ 0.95
Smg8Q8VE18 Cdkn3-203ENSMUST00000227149 1952 ntBASIC21.01■□□□□ 0.95
Smg8Q8VE18 Pelo-201ENSMUST00000109226 1600 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Smg8Q8VE18 Gm38399-201ENSMUST00000112103 1645 ntTSL 2 BASIC21.01■□□□□ 0.95
Smg8Q8VE18 Dlx6-203ENSMUST00000171311 1071 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Smg8Q8VE18 Gm9780-201ENSMUST00000184272 350 ntTSL 2 BASIC21.01■□□□□ 0.95
Smg8Q8VE18 1700081N11Rik-202ENSMUST00000221447 569 ntTSL 3 BASIC21.01■□□□□ 0.95
Smg8Q8VE18 Tfdp2-202ENSMUST00000165120 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
Smg8Q8VE18 Gpr162-201ENSMUST00000046893 2676 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Smg8Q8VE18 Ldb1-202ENSMUST00000056931 2295 ntAPPRIS P2 TSL 1 (best) BASIC21.01■□□□□ 0.95
Smg8Q8VE18 AC152827.1-201ENSMUST00000221143 2189 ntBASIC21■□□□□ 0.95
Smg8Q8VE18 Cnot6-203ENSMUST00000145353 5736 ntAPPRIS P1 TSL 5 BASIC21■□□□□ 0.95
Smg8Q8VE18 Tsen54-201ENSMUST00000021134 1979 ntAPPRIS P2 TSL 1 (best) BASIC21■□□□□ 0.95
Smg8Q8VE18 Osbpl2-201ENSMUST00000040668 2805 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Smg8Q8VE18 Gm13234-201ENSMUST00000120010 747 ntBASIC21■□□□□ 0.95
Smg8Q8VE18 Mpig6b-202ENSMUST00000174190 729 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Smg8Q8VE18 Ccdc84-211ENSMUST00000217270 681 ntTSL 1 (best) BASIC21■□□□□ 0.95
Smg8Q8VE18 3830408C21Rik-205ENSMUST00000225426 1898 ntBASIC21■□□□□ 0.95
Smg8Q8VE18 Hsd17b2-201ENSMUST00000034304 1320 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Smg8Q8VE18 Nat14-201ENSMUST00000047309 1612 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Smg8Q8VE18 Kcnk15-202ENSMUST00000109396 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
Smg8Q8VE18 Vmn1r17-205ENSMUST00000228342 2230 ntAPPRIS P2 BASIC21■□□□□ 0.95
Smg8Q8VE18 1700123O20Rik-201ENSMUST00000038539 1843 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Smg8Q8VE18 Hoxc11-201ENSMUST00000001701 2021 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Smg8Q8VE18 Brd1-203ENSMUST00000109381 4886 ntTSL 5 BASIC20.99■□□□□ 0.95
Smg8Q8VE18 Fam241b-209ENSMUST00000142821 1283 ntAPPRIS P1 TSL 5 BASIC20.99■□□□□ 0.95
Smg8Q8VE18 Gm15298-201ENSMUST00000145916 1212 ntTSL 5 BASIC20.99■□□□□ 0.95
Smg8Q8VE18 P4hb-203ENSMUST00000168360 770 ntTSL 3 BASIC20.99■□□□□ 0.95
Smg8Q8VE18 Mpzl1-210ENSMUST00000194437 643 ntTSL 3 BASIC20.99■□□□□ 0.95
Smg8Q8VE18 1700017B05Rik-204ENSMUST00000215298 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
Smg8Q8VE18 Cnih2-201ENSMUST00000025805 1237 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Smg8Q8VE18 H2-Ab1-201ENSMUST00000040828 1211 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Smg8Q8VE18 Fcrlb-201ENSMUST00000094337 1284 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Smg8Q8VE18 Tmem86a-201ENSMUST00000010451 1831 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Smg8Q8VE18 Gp1bb-202ENSMUST00000167388 1847 ntAPPRIS ALT2 TSL 2 BASIC20.99■□□□□ 0.95
Smg8Q8VE18 Gm9817-201ENSMUST00000054395 2531 ntAPPRIS P1 BASIC20.99■□□□□ 0.95
Smg8Q8VE18 Gm15043-201ENSMUST00000118843 1543 ntBASIC20.99■□□□□ 0.95
Smg8Q8VE18 Acvrl1-202ENSMUST00000117984 1852 ntAPPRIS P1 TSL 5 BASIC20.98■□□□□ 0.95
Smg8Q8VE18 Hoxa5-201ENSMUST00000048794 1877 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Smg8Q8VE18 Gm9934-201ENSMUST00000098303 2077 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Smg8Q8VE18 Htra3-201ENSMUST00000087629 2750 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Smg8Q8VE18 A930001C03Rik-204ENSMUST00000154407 1402 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Smg8Q8VE18 Gm42911-201ENSMUST00000199360 1630 ntBASIC20.98■□□□□ 0.95
Smg8Q8VE18 Zfp467-201ENSMUST00000101443 599 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Smg8Q8VE18 Gm12660-201ENSMUST00000123764 664 ntTSL 3 BASIC20.98■□□□□ 0.95
Smg8Q8VE18 Prmt1-210ENSMUST00000208829 621 ntTSL 5 BASIC20.98■□□□□ 0.95
Smg8Q8VE18 Vkorc1l1-202ENSMUST00000073945 650 ntTSL 2 BASIC20.98■□□□□ 0.95
Smg8Q8VE18 Rell2-204ENSMUST00000163591 1057 ntTSL 5 BASIC20.97■□□□□ 0.95
Smg8Q8VE18 Gfra4-201ENSMUST00000028787 909 ntAPPRIS P3 TSL 1 (best) BASIC20.97■□□□□ 0.95
Smg8Q8VE18 Ptrh1-201ENSMUST00000066352 952 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Smg8Q8VE18 Olfr94-201ENSMUST00000055324 1304 ntAPPRIS P2 BASIC20.97■□□□□ 0.95
Smg8Q8VE18 Ctdsp1-201ENSMUST00000027367 2876 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Smg8Q8VE18 Hpdl-201ENSMUST00000055436 1804 ntAPPRIS P1 BASIC20.97■□□□□ 0.95
Smg8Q8VE18 Gm45015-201ENSMUST00000207943 1364 ntAPPRIS P1 TSL 5 BASIC20.97■□□□□ 0.95
Smg8Q8VE18 Zfp821-201ENSMUST00000034163 2127 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Smg8Q8VE18 Lmtk3-202ENSMUST00000120005 4997 ntAPPRIS P2 TSL 1 (best) BASIC20.96■□□□□ 0.95
Smg8Q8VE18 Man1a-201ENSMUST00000003843 5137 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Smg8Q8VE18 Exoc3l2-201ENSMUST00000011407 2200 ntTSL 5 BASIC20.96■□□□□ 0.95
Smg8Q8VE18 Sarnp-201ENSMUST00000105230 918 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Smg8Q8VE18 Gfra4-205ENSMUST00000110239 810 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
Smg8Q8VE18 Polr2j-202ENSMUST00000111127 900 ntTSL 2 BASIC20.96■□□□□ 0.95
Smg8Q8VE18 Mrpl52-204ENSMUST00000199195 463 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Smg8Q8VE18 E130116L18Rik-201ENSMUST00000066954 306 ntAPPRIS P1 BASIC20.96■□□□□ 0.95
Smg8Q8VE18 Gm9970-201ENSMUST00000068997 558 ntAPPRIS P1 BASIC20.96■□□□□ 0.95
Smg8Q8VE18 Tfap2e-201ENSMUST00000048194 2085 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Smg8Q8VE18 Foxf2-201ENSMUST00000042054 2363 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Retrieved 100 of 76,532 protein–RNA pairs in 14.6 ms