Protein–RNA interactions for Protein: Q80TE0

Rpap1, RNA polymerase II-associated protein 1, mousemouse

Predictions only

Length 1,409 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpap1Q80TE0 Cdx1-201ENSMUST00000025521 1750 ntAPPRIS P1 TSL 1 (best) BASIC30.9■■■□□ 2.54
Rpap1Q80TE0 Gm26682-201ENSMUST00000180850 1729 ntTSL 1 (best) BASIC30.9■■■□□ 2.54
Rpap1Q80TE0 Vps51-209ENSMUST00000160590 840 ntTSL 1 (best) BASIC30.9■■■□□ 2.54
Rpap1Q80TE0 Hikeshi-201ENSMUST00000075010 715 ntTSL 3 BASIC30.9■■■□□ 2.54
Rpap1Q80TE0 Dao-201ENSMUST00000086599 1525 ntTSL 1 (best) BASIC30.89■■■□□ 2.54
Rpap1Q80TE0 Klc3-204ENSMUST00000108459 1849 ntTSL 1 (best) BASIC30.89■■■□□ 2.54
Rpap1Q80TE0 Lypla2-202ENSMUST00000105852 1588 ntAPPRIS P1 TSL 1 (best) BASIC30.89■■■□□ 2.54
Rpap1Q80TE0 Ung-201ENSMUST00000031587 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC30.89■■■□□ 2.54
Rpap1Q80TE0 Gm11762-201ENSMUST00000135630 1705 ntTSL 1 (best) BASIC30.89■■■□□ 2.54
Rpap1Q80TE0 2610528J11Rik-202ENSMUST00000106367 736 ntAPPRIS P1 TSL 2 BASIC30.89■■■□□ 2.53
Rpap1Q80TE0 Cdh4-203ENSMUST00000108911 1208 ntTSL 1 (best) BASIC30.89■■■□□ 2.53
Rpap1Q80TE0 Gm6420-201ENSMUST00000193885 723 ntBASIC30.89■■■□□ 2.53
Rpap1Q80TE0 Gm6365-201ENSMUST00000054711 744 ntBASIC30.89■■■□□ 2.53
Rpap1Q80TE0 Fdxacb1-203ENSMUST00000176335 1817 ntTSL 1 (best) BASIC30.89■■■□□ 2.53
Rpap1Q80TE0 Cldn5-201ENSMUST00000043577 1414 ntAPPRIS P1 BASIC30.89■■■□□ 2.53
Rpap1Q80TE0 Lbx1-201ENSMUST00000099401 2484 ntAPPRIS P1 TSL 1 (best) BASIC30.88■■■□□ 2.53
Rpap1Q80TE0 Rfx8-202ENSMUST00000151913 2008 ntAPPRIS P1 TSL 1 (best) BASIC30.88■■■□□ 2.53
Rpap1Q80TE0 March9-201ENSMUST00000040307 3037 ntAPPRIS P1 TSL 1 (best) BASIC30.87■■■□□ 2.53
Rpap1Q80TE0 Kmt5a-201ENSMUST00000059580 2739 ntAPPRIS P1 TSL 1 (best) BASIC30.87■■■□□ 2.53
Rpap1Q80TE0 Gm13168-201ENSMUST00000121771 632 ntBASIC30.87■■■□□ 2.53
Rpap1Q80TE0 Zfp560-202ENSMUST00000143992 608 ntTSL 1 (best) BASIC30.87■■■□□ 2.53
Rpap1Q80TE0 Nnat-205ENSMUST00000153739 1146 ntAPPRIS ALT1 TSL 1 (best) BASIC30.87■■■□□ 2.53
Rpap1Q80TE0 Nnat-206ENSMUST00000172487 404 ntTSL 5 BASIC30.87■■■□□ 2.53
Rpap1Q80TE0 Nnat-210ENSMUST00000173839 1135 ntTSL 1 (best) BASIC30.87■■■□□ 2.53
Rpap1Q80TE0 Camkk2-202ENSMUST00000196742 1084 ntTSL 1 (best) BASIC30.87■■■□□ 2.53
Rpap1Q80TE0 Dpysl3-201ENSMUST00000025379 2106 ntAPPRIS P1 TSL 1 (best) BASIC30.87■■■□□ 2.53
Rpap1Q80TE0 Nat14-201ENSMUST00000047309 1612 ntAPPRIS P1 TSL 1 (best) BASIC30.87■■■□□ 2.53
Rpap1Q80TE0 Gm20431-201ENSMUST00000125544 2367 ntAPPRIS P1 TSL 5 BASIC30.87■■■□□ 2.53
Rpap1Q80TE0 Raph1-201ENSMUST00000027168 2241 ntAPPRIS ALT2 TSL 5 BASIC30.87■■■□□ 2.53
Rpap1Q80TE0 Josd2-204ENSMUST00000118628 864 ntAPPRIS P1 TSL 2 BASIC30.86■■■□□ 2.53
Rpap1Q80TE0 Josd2-201ENSMUST00000035844 930 ntAPPRIS P1 TSL 1 (best) BASIC30.86■■■□□ 2.53
Rpap1Q80TE0 Has1-201ENSMUST00000003762 2090 ntAPPRIS P1 TSL 1 (best) BASIC30.86■■■□□ 2.53
Rpap1Q80TE0 Otud5-204ENSMUST00000115667 2708 ntAPPRIS ALT2 TSL 5 BASIC30.86■■■□□ 2.53
Rpap1Q80TE0 Hif1a-203ENSMUST00000110464 1759 ntTSL 1 (best) BASIC30.86■■■□□ 2.53
Rpap1Q80TE0 Ogfod2-202ENSMUST00000119269 1474 ntTSL 1 (best) BASIC30.85■■■□□ 2.53
Rpap1Q80TE0 Gm15155-201ENSMUST00000112542 1009 ntAPPRIS P1 TSL 1 (best) BASIC30.85■■■□□ 2.53
Rpap1Q80TE0 Gm3264-202ENSMUST00000166776 882 ntAPPRIS ALT2 TSL 5 BASIC30.85■■■□□ 2.53
Rpap1Q80TE0 Gm6211-202ENSMUST00000167849 925 ntBASIC30.85■■■□□ 2.53
Rpap1Q80TE0 1700067K01Rik-203ENSMUST00000172548 986 ntAPPRIS P2 TSL 1 (best) BASIC30.85■■■□□ 2.53
Rpap1Q80TE0 Gm2990-201ENSMUST00000180662 1118 ntTSL 1 (best) BASIC30.85■■■□□ 2.53
Rpap1Q80TE0 Adssl1-202ENSMUST00000180015 1819 ntTSL 1 (best) BASIC30.85■■■□□ 2.53
Rpap1Q80TE0 Zfp467-202ENSMUST00000114556 2287 ntTSL 1 (best) BASIC30.84■■■□□ 2.53
Rpap1Q80TE0 Rhbdd3-201ENSMUST00000036320 1790 ntTSL 1 (best) BASIC30.84■■■□□ 2.53
Rpap1Q80TE0 Gm12473-201ENSMUST00000137535 579 ntTSL 5 BASIC30.84■■■□□ 2.53
Rpap1Q80TE0 Ptbp3-204ENSMUST00000140925 606 ntTSL 3 BASIC30.84■■■□□ 2.53
Rpap1Q80TE0 Rian-206ENSMUST00000182119 329 ntTSL 3 BASIC30.84■■■□□ 2.53
Rpap1Q80TE0 Shq1-201ENSMUST00000089245 1638 ntTSL 1 (best) BASIC30.84■■■□□ 2.53
Rpap1Q80TE0 Aktip-202ENSMUST00000120213 2200 ntAPPRIS P1 TSL 1 (best) BASIC30.84■■■□□ 2.53
Rpap1Q80TE0 Spats2-201ENSMUST00000063517 3065 ntAPPRIS P1 TSL 1 (best) BASIC30.83■■■□□ 2.53
Rpap1Q80TE0 Gm13534-201ENSMUST00000121169 513 ntBASIC30.83■■■□□ 2.53
Rpap1Q80TE0 Gm45894-202ENSMUST00000212728 1097 ntTSL 1 (best) BASIC30.83■■■□□ 2.53
Rpap1Q80TE0 Msl1-203ENSMUST00000107485 2091 ntTSL 1 (best) BASIC30.83■■■□□ 2.53
Rpap1Q80TE0 Rgs19-207ENSMUST00000108779 642 ntTSL 5 BASIC30.82■■■□□ 2.52
Rpap1Q80TE0 Mpc1-208ENSMUST00000155364 958 ntAPPRIS P1 TSL 2 BASIC30.82■■■□□ 2.52
Rpap1Q80TE0 Mrps33-201ENSMUST00000031978 1107 ntAPPRIS P1 TSL 1 (best) BASIC30.82■■■□□ 2.52
Rpap1Q80TE0 Gm10655-201ENSMUST00000098658 1397 ntBASIC30.82■■■□□ 2.52
Rpap1Q80TE0 Pgbd5-204ENSMUST00000140012 3222 ntAPPRIS ALT2 TSL 5 BASIC30.82■■■□□ 2.52
Rpap1Q80TE0 Nrg3-203ENSMUST00000173780 2137 ntAPPRIS ALT2 TSL 5 BASIC30.82■■■□□ 2.52
Rpap1Q80TE0 Ngb-203ENSMUST00000110177 1611 ntAPPRIS ALT1 TSL 1 (best) BASIC30.82■■■□□ 2.52
Rpap1Q80TE0 Gm42911-201ENSMUST00000199360 1630 ntBASIC30.82■■■□□ 2.52
Rpap1Q80TE0 C1qtnf5-202ENSMUST00000114816 1259 ntAPPRIS P1 TSL 1 (best) BASIC30.81■■■□□ 2.52
Rpap1Q80TE0 Atp23-202ENSMUST00000168520 1043 ntAPPRIS P1 TSL 1 (best) BASIC30.81■■■□□ 2.52
Rpap1Q80TE0 Foxk1-202ENSMUST00000198422 687 ntTSL 3 BASIC30.81■■■□□ 2.52
Rpap1Q80TE0 Hlx-201ENSMUST00000048572 2278 ntAPPRIS P1 TSL 1 (best) BASIC30.81■■■□□ 2.52
Rpap1Q80TE0 Clta-202ENSMUST00000107846 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC30.81■■■□□ 2.52
Rpap1Q80TE0 Sh3bp1-204ENSMUST00000109698 1923 ntTSL 1 (best) BASIC30.81■■■□□ 2.52
Rpap1Q80TE0 Galr2-201ENSMUST00000055872 1940 ntAPPRIS P1 TSL 1 (best) BASIC30.81■■■□□ 2.52
Rpap1Q80TE0 Cebpa-202ENSMUST00000205391 2161 ntTSL 5 BASIC30.81■■■□□ 2.52
Rpap1Q80TE0 Ing2-201ENSMUST00000080353 2812 ntAPPRIS P1 TSL 1 (best) BASIC30.81■■■□□ 2.52
Rpap1Q80TE0 Sqstm1-205ENSMUST00000143379 1266 ntTSL 5 BASIC30.81■■■□□ 2.52
Rpap1Q80TE0 Gm37856-201ENSMUST00000191634 999 ntBASIC30.81■■■□□ 2.52
Rpap1Q80TE0 Cnih2-201ENSMUST00000025805 1237 ntAPPRIS P1 TSL 1 (best) BASIC30.81■■■□□ 2.52
Rpap1Q80TE0 Reep6-207ENSMUST00000186864 2015 ntAPPRIS P3 TSL 1 (best) BASIC30.8■■■□□ 2.52
Rpap1Q80TE0 Atg3-201ENSMUST00000023343 2057 ntAPPRIS P1 TSL 1 (best) BASIC30.8■■■□□ 2.52
Rpap1Q80TE0 Cnp-201ENSMUST00000103120 2357 ntAPPRIS P1 TSL 1 (best) BASIC30.8■■■□□ 2.52
Rpap1Q80TE0 Ube2q1-201ENSMUST00000038356 3077 ntAPPRIS P1 TSL 1 (best) BASIC30.8■■■□□ 2.52
Rpap1Q80TE0 1600012H06Rik-203ENSMUST00000174004 1466 ntAPPRIS P1 TSL 1 (best) BASIC30.8■■■□□ 2.52
Rpap1Q80TE0 Henmt1-202ENSMUST00000098680 1466 ntAPPRIS ALT2 TSL 1 (best) BASIC30.8■■■□□ 2.52
Rpap1Q80TE0 4930519P11Rik-201ENSMUST00000181369 501 ntAPPRIS P1 BASIC30.8■■■□□ 2.52
Rpap1Q80TE0 Mir7071-201ENSMUST00000184847 69 ntBASIC30.8■■■□□ 2.52
Rpap1Q80TE0 AC135637.1-201ENSMUST00000227750 365 ntBASIC30.8■■■□□ 2.52
Rpap1Q80TE0 Stoml2-201ENSMUST00000030169 1874 ntAPPRIS P1 TSL 1 (best) BASIC30.79■■■□□ 2.52
Rpap1Q80TE0 Sncb-201ENSMUST00000036825 1351 ntAPPRIS P1 TSL 1 (best) BASIC30.79■■■□□ 2.52
Rpap1Q80TE0 Tspan2os-201ENSMUST00000146624 590 ntTSL 1 (best) BASIC30.79■■■□□ 2.52
Rpap1Q80TE0 Gm10153-202ENSMUST00000210290 963 ntAPPRIS P1 BASIC30.79■■■□□ 2.52
Rpap1Q80TE0 Rtl8a-201ENSMUST00000088779 1195 ntAPPRIS P1 BASIC30.79■■■□□ 2.52
Rpap1Q80TE0 Slc10a3-201ENSMUST00000037967 2023 ntAPPRIS P2 TSL 1 (best) BASIC30.79■■■□□ 2.52
Rpap1Q80TE0 Cdc16-201ENSMUST00000043962 2301 ntAPPRIS P1 TSL 1 (best) BASIC30.78■■■□□ 2.52
Rpap1Q80TE0 2610035F20Rik-202ENSMUST00000177306 1149 ntTSL 1 (best) BASIC30.78■■■□□ 2.52
Rpap1Q80TE0 1110004E09Rik-201ENSMUST00000023694 1143 ntAPPRIS P1 TSL 1 (best) BASIC30.78■■■□□ 2.52
Rpap1Q80TE0 Tnnt2-201ENSMUST00000027671 1064 ntAPPRIS ALT2 TSL 5 BASIC30.78■■■□□ 2.52
Rpap1Q80TE0 Tmem239-201ENSMUST00000055421 1291 ntAPPRIS P1 TSL 1 (best) BASIC30.78■■■□□ 2.52
Rpap1Q80TE0 Hexdc-201ENSMUST00000038831 2378 ntAPPRIS ALT2 TSL 5 BASIC30.77■■■□□ 2.52
Rpap1Q80TE0 Habp4-201ENSMUST00000021929 2564 ntAPPRIS P1 TSL 1 (best) BASIC30.77■■■□□ 2.52
Rpap1Q80TE0 Eda-204ENSMUST00000113777 1056 ntTSL 5 BASIC30.77■■■□□ 2.52
Rpap1Q80TE0 AC122769.4-201ENSMUST00000228166 901 ntBASIC30.77■■■□□ 2.52
Rpap1Q80TE0 Slc7a6os-201ENSMUST00000035925 1246 ntAPPRIS P1 TSL 1 (best) BASIC30.77■■■□□ 2.52
Rpap1Q80TE0 Eda-201ENSMUST00000071453 1152 ntTSL 1 (best) BASIC30.77■■■□□ 2.52
Rpap1Q80TE0 Sapcd2-203ENSMUST00000114293 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC30.77■■■□□ 2.52
Rpap1Q80TE0 Idnk-202ENSMUST00000109868 1462 ntTSL 1 (best) BASIC30.77■■■□□ 2.52
Retrieved 100 of 76,532 protein–RNA pairs in 36 ms