Protein–RNA interactions for Protein: Q7M732

Rtl1, Retrotransposon-like protein 1, mousemouse

Predictions only

Length 1,744 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rtl1Q7M732 Rasef-203ENSMUST00000222414 2127 ntAPPRIS P1 TSL 5 BASIC35.45■■■■□ 3.27
Rtl1Q7M732 Sys1-202ENSMUST00000109352 2001 ntAPPRIS P1 TSL 5 BASIC35.45■■■■□ 3.27
Rtl1Q7M732 Arhgap23-201ENSMUST00000093940 2409 ntTSL 1 (best) BASIC35.45■■■■□ 3.26
Rtl1Q7M732 Epb41l4b-201ENSMUST00000030142 3247 ntAPPRIS P2 TSL 1 (best) BASIC35.44■■■■□ 3.26
Rtl1Q7M732 Smkr-ps-202ENSMUST00000141679 901 ntTSL 1 (best) BASIC35.44■■■■□ 3.26
Rtl1Q7M732 Gm18671-201ENSMUST00000214826 683 ntBASIC35.44■■■■□ 3.26
Rtl1Q7M732 Ltb-201ENSMUST00000025262 1160 ntAPPRIS P2 TSL 1 (best) BASIC35.44■■■■□ 3.26
Rtl1Q7M732 Nat14-201ENSMUST00000047309 1612 ntAPPRIS P1 TSL 1 (best) BASIC35.44■■■■□ 3.26
Rtl1Q7M732 Lrrc38-201ENSMUST00000052458 2324 ntAPPRIS P1 TSL 1 (best) BASIC35.44■■■■□ 3.26
Rtl1Q7M732 Zcrb1-208ENSMUST00000162160 850 ntAPPRIS ALT1 TSL 1 (best) BASIC35.43■■■■□ 3.26
Rtl1Q7M732 Gm7291-201ENSMUST00000199147 382 ntBASIC35.43■■■■□ 3.26
Rtl1Q7M732 Gm11175-202ENSMUST00000211380 408 ntTSL 3 BASIC35.43■■■■□ 3.26
Rtl1Q7M732 Efcc1-201ENSMUST00000032132 2729 ntAPPRIS ALT2 TSL 5 BASIC35.43■■■■□ 3.26
Rtl1Q7M732 Hist1h2ag-201ENSMUST00000091741 485 ntAPPRIS P1 BASIC35.43■■■■□ 3.26
Rtl1Q7M732 Dpf1-201ENSMUST00000049977 2309 ntAPPRIS P2 TSL 1 (best) BASIC35.43■■■■□ 3.26
Rtl1Q7M732 Neurl1b-203ENSMUST00000183077 1084 ntTSL 5 BASIC35.43■■■■□ 3.26
Rtl1Q7M732 Gm42569-201ENSMUST00000200539 472 ntBASIC35.43■■■■□ 3.26
Rtl1Q7M732 Hpca-204ENSMUST00000116444 1847 ntAPPRIS P1 TSL 5 BASIC35.42■■■■□ 3.26
Rtl1Q7M732 Nab2-201ENSMUST00000026469 2582 ntAPPRIS P1 TSL 1 (best) BASIC35.42■■■■□ 3.26
Rtl1Q7M732 Hras-207ENSMUST00000168550 2272 ntTSL 5 BASIC35.42■■■■□ 3.26
Rtl1Q7M732 Nfix-201ENSMUST00000076715 1403 ntTSL 1 (best) BASIC35.42■■■■□ 3.26
Rtl1Q7M732 Rab5c-201ENSMUST00000019317 1967 ntTSL 1 (best) BASIC35.42■■■■□ 3.26
Rtl1Q7M732 Aplp1-201ENSMUST00000006828 2343 ntAPPRIS P1 TSL 1 (best) BASIC35.42■■■■□ 3.26
Rtl1Q7M732 Gm34220-201ENSMUST00000223001 2709 ntBASIC35.42■■■■□ 3.26
Rtl1Q7M732 Ugdh-201ENSMUST00000031103 2550 ntAPPRIS P1 TSL 1 (best) BASIC35.42■■■■□ 3.26
Rtl1Q7M732 Gm38165-201ENSMUST00000191654 486 ntTSL 1 (best) BASIC35.41■■■■□ 3.26
Rtl1Q7M732 Mfap4-201ENSMUST00000040522 939 ntAPPRIS ALT2 TSL 2 BASIC35.41■■■■□ 3.26
Rtl1Q7M732 Hccs-202ENSMUST00000112115 2473 ntAPPRIS P1 TSL 1 (best) BASIC35.41■■■■□ 3.26
Rtl1Q7M732 Rab34-202ENSMUST00000056241 1558 ntTSL 5 BASIC35.41■■■■□ 3.26
Rtl1Q7M732 Kcnd3os-201ENSMUST00000130683 1091 ntTSL 1 (best) BASIC35.4■■■■□ 3.26
Rtl1Q7M732 Gm27405-201ENSMUST00000184201 112 ntBASIC35.4■■■■□ 3.26
Rtl1Q7M732 Kremen2-201ENSMUST00000046525 2123 ntAPPRIS P1 TSL 1 (best) BASIC35.4■■■■□ 3.26
Rtl1Q7M732 Syt17-203ENSMUST00000203485 1932 ntTSL 1 (best) BASIC35.4■■■■□ 3.26
Rtl1Q7M732 Adssl1-202ENSMUST00000180015 1819 ntTSL 1 (best) BASIC35.4■■■■□ 3.26
Rtl1Q7M732 Slc12a8-204ENSMUST00000121925 2656 ntAPPRIS P2 TSL 5 BASIC35.4■■■■□ 3.26
Rtl1Q7M732 Tedc1-201ENSMUST00000049271 2441 ntAPPRIS P1 TSL 1 (best) BASIC35.39■■■■□ 3.26
Rtl1Q7M732 Meis3-201ENSMUST00000002495 1731 ntAPPRIS P1 TSL 1 (best) BASIC35.39■■■■□ 3.26
Rtl1Q7M732 Gorasp2-203ENSMUST00000112205 1196 ntAPPRIS ALT2 TSL 1 (best) BASIC35.39■■■■□ 3.26
Rtl1Q7M732 Hes3-202ENSMUST00000218045 962 ntAPPRIS ALT2 TSL 5 BASIC35.39■■■■□ 3.26
Rtl1Q7M732 Ap3s1-204ENSMUST00000225520 957 ntBASIC35.39■■■■□ 3.26
Rtl1Q7M732 B230217C12Rik-201ENSMUST00000054783 1189 ntAPPRIS P1 TSL 5 BASIC35.39■■■■□ 3.26
Rtl1Q7M732 Mum1-201ENSMUST00000020365 2640 ntAPPRIS P1 TSL 1 (best) BASIC35.39■■■■□ 3.26
Rtl1Q7M732 Dnajb11-201ENSMUST00000004574 1927 ntAPPRIS P1 TSL 1 (best) BASIC35.39■■■■□ 3.26
Rtl1Q7M732 Mettl26-205ENSMUST00000169308 1026 ntTSL 2 BASIC35.38■■■■□ 3.25
Rtl1Q7M732 Gm36033-202ENSMUST00000214827 745 ntTSL 2 BASIC35.38■■■■□ 3.25
Rtl1Q7M732 Kctd20-204ENSMUST00000122163 2423 ntAPPRIS P1 TSL 5 BASIC35.38■■■■□ 3.25
Rtl1Q7M732 Pdcd7-201ENSMUST00000048184 2419 ntAPPRIS P2 TSL 1 (best) BASIC35.38■■■■□ 3.25
Rtl1Q7M732 Uba5-201ENSMUST00000035166 2404 ntAPPRIS P1 TSL 1 (best) BASIC35.38■■■■□ 3.25
Rtl1Q7M732 Shisa4-201ENSMUST00000041240 1763 ntAPPRIS P1 TSL 1 (best) BASIC35.38■■■■□ 3.25
Rtl1Q7M732 1110032F04Rik-201ENSMUST00000054551 2578 ntAPPRIS P1 BASIC35.38■■■■□ 3.25
Rtl1Q7M732 Gm29257-201ENSMUST00000186115 639 ntBASIC35.37■■■■□ 3.25
Rtl1Q7M732 Triobp-202ENSMUST00000109688 2553 ntAPPRIS ALT2 TSL 1 (best) BASIC35.37■■■■□ 3.25
Rtl1Q7M732 Rell2-204ENSMUST00000163591 1057 ntTSL 5 BASIC35.37■■■■□ 3.25
Rtl1Q7M732 E130116L18Rik-201ENSMUST00000066954 306 ntAPPRIS P1 BASIC35.37■■■■□ 3.25
Rtl1Q7M732 Otud5-203ENSMUST00000115666 2471 ntAPPRIS ALT2 TSL 1 (best) BASIC35.37■■■■□ 3.25
Rtl1Q7M732 Gm11762-201ENSMUST00000135630 1705 ntTSL 1 (best) BASIC35.36■■■■□ 3.25
Rtl1Q7M732 Celf6-201ENSMUST00000034840 2765 ntAPPRIS P2 TSL 1 (best) BASIC35.36■■■■□ 3.25
Rtl1Q7M732 Pink1-201ENSMUST00000030536 2375 ntAPPRIS P2 TSL 1 (best) BASIC35.36■■■■□ 3.25
Rtl1Q7M732 Spint1-202ENSMUST00000110816 1913 ntAPPRIS P1 TSL 5 BASIC35.36■■■■□ 3.25
Rtl1Q7M732 Gm45890-202ENSMUST00000212188 1052 ntTSL 1 (best) BASIC35.36■■■■□ 3.25
Rtl1Q7M732 Rasgrp2-206ENSMUST00000113472 2124 ntTSL 1 (best) BASIC35.36■■■■□ 3.25
Rtl1Q7M732 Gm42911-201ENSMUST00000199360 1630 ntBASIC35.35■■■■□ 3.25
Rtl1Q7M732 Rnf32-204ENSMUST00000160246 1565 ntAPPRIS P1 TSL 1 (best) BASIC35.35■■■■□ 3.25
Rtl1Q7M732 Dtnb-216ENSMUST00000173736 2175 ntAPPRIS ALT2 TSL 5 BASIC35.35■■■■□ 3.25
Rtl1Q7M732 P4hb-203ENSMUST00000168360 770 ntTSL 3 BASIC35.35■■■■□ 3.25
Rtl1Q7M732 Lypla2-202ENSMUST00000105852 1588 ntAPPRIS P1 TSL 1 (best) BASIC35.34■■■■□ 3.25
Rtl1Q7M732 Nxph4-201ENSMUST00000095266 1675 ntAPPRIS P1 TSL 1 (best) BASIC35.34■■■■□ 3.25
Rtl1Q7M732 Sae1-201ENSMUST00000094815 1875 ntAPPRIS P1 TSL 1 (best) BASIC35.34■■■■□ 3.25
Rtl1Q7M732 Ldb1-202ENSMUST00000056931 2295 ntAPPRIS P2 TSL 1 (best) BASIC35.34■■■■□ 3.25
Rtl1Q7M732 Gtpbp2-217ENSMUST00000172170 2587 ntTSL 5 BASIC35.34■■■■□ 3.25
Rtl1Q7M732 Snrpd3-203ENSMUST00000220229 442 ntTSL 3 BASIC35.33■■■■□ 3.25
Rtl1Q7M732 AC154266.1-201ENSMUST00000223190 503 ntBASIC35.33■■■■□ 3.25
Rtl1Q7M732 Cox7c-202ENSMUST00000078764 433 ntTSL 2 BASIC35.33■■■■□ 3.25
Rtl1Q7M732 Reep4-203ENSMUST00000226563 1444 ntBASIC35.33■■■■□ 3.25
Rtl1Q7M732 Gp1bb-202ENSMUST00000167388 1847 ntAPPRIS ALT2 TSL 2 BASIC35.33■■■■□ 3.25
Rtl1Q7M732 Ccdc34-201ENSMUST00000028580 2070 ntAPPRIS P1 TSL 1 (best) BASIC35.32■■■■□ 3.25
Rtl1Q7M732 Nfe2l3-203ENSMUST00000160133 1125 ntTSL 1 (best) BASIC35.32■■■■□ 3.25
Rtl1Q7M732 Dlx6-203ENSMUST00000171311 1071 ntAPPRIS P1 TSL 1 (best) BASIC35.32■■■■□ 3.25
Rtl1Q7M732 4930467K11Rik-201ENSMUST00000180831 723 ntTSL 1 (best) BASIC35.32■■■■□ 3.25
Rtl1Q7M732 Cck-203ENSMUST00000215228 783 ntAPPRIS P1 TSL 1 (best) BASIC35.32■■■■□ 3.25
Rtl1Q7M732 Erh-205ENSMUST00000218740 981 ntTSL 2 BASIC35.32■■■■□ 3.25
Rtl1Q7M732 Sept4-206ENSMUST00000122067 1303 ntTSL 1 (best) BASIC35.32■■■■□ 3.24
Rtl1Q7M732 Derl2-207ENSMUST00000171041 1466 ntTSL 1 (best) BASIC35.32■■■■□ 3.24
Rtl1Q7M732 Gramd1a-202ENSMUST00000085636 2543 ntAPPRIS ALT2 TSL 5 BASIC35.32■■■■□ 3.24
Rtl1Q7M732 Riox1-201ENSMUST00000053744 2344 ntAPPRIS P1 BASIC35.31■■■■□ 3.24
Rtl1Q7M732 Gm5475-201ENSMUST00000132119 2608 ntAPPRIS P5 TSL 1 (best) BASIC35.31■■■■□ 3.24
Rtl1Q7M732 Gm13234-201ENSMUST00000120010 747 ntBASIC35.31■■■■□ 3.24
Rtl1Q7M732 Tmem234-215ENSMUST00000173758 453 ntTSL 2 BASIC35.31■■■■□ 3.24
Rtl1Q7M732 Gm29394-202ENSMUST00000176935 1326 ntAPPRIS P5 TSL 2 BASIC35.31■■■■□ 3.24
Rtl1Q7M732 Zmym3-207ENSMUST00000120201 1859 ntTSL 1 (best) BASIC35.3■■■■□ 3.24
Rtl1Q7M732 Adamtsl5-202ENSMUST00000105352 989 ntTSL 1 (best) BASIC35.3■■■■□ 3.24
Rtl1Q7M732 Gm15270-201ENSMUST00000125158 870 ntTSL 3 BASIC35.3■■■■□ 3.24
Rtl1Q7M732 Stum-202ENSMUST00000179826 601 ntAPPRIS ALT1 TSL 5 BASIC35.3■■■■□ 3.24
Rtl1Q7M732 AV356131-201ENSMUST00000206201 750 ntBASIC35.3■■■■□ 3.24
Rtl1Q7M732 Igfbp6-201ENSMUST00000023807 1112 ntAPPRIS P1 TSL 1 (best) BASIC35.3■■■■□ 3.24
Rtl1Q7M732 Etv4-202ENSMUST00000107176 2377 ntTSL 1 (best) BASIC35.3■■■■□ 3.24
Rtl1Q7M732 Etv4-201ENSMUST00000017868 2395 ntAPPRIS ALT1 TSL 5 BASIC35.3■■■■□ 3.24
Rtl1Q7M732 Klhl25-203ENSMUST00000205612 1343 ntTSL 1 (best) BASIC35.29■■■■□ 3.24
Rtl1Q7M732 Lsm14a-201ENSMUST00000085585 2944 ntAPPRIS P1 TSL 1 (best) BASIC35.29■■■■□ 3.24
Rtl1Q7M732 Rab7-205ENSMUST00000113600 2159 ntAPPRIS P1 TSL 1 (best) BASIC35.29■■■■□ 3.24
Retrieved 100 of 76,532 protein–RNA pairs in 85.2 ms