Protein–RNA interactions for Protein: Q78XR0

Trappc6a, Trafficking protein particle complex subunit 6A, mousemouse

Predictions only

Length 159 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trappc6aQ78XR0 Serbp1-207ENSMUST00000203436 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
Trappc6aQ78XR0 Gm26766-202ENSMUST00000227544 2347 ntBASIC19.5■□□□□ 0.71
Trappc6aQ78XR0 Gm17041-201ENSMUST00000163196 479 ntTSL 3 BASIC19.5■□□□□ 0.71
Trappc6aQ78XR0 Prmt1-210ENSMUST00000208829 621 ntTSL 5 BASIC19.5■□□□□ 0.71
Trappc6aQ78XR0 Cetn3-201ENSMUST00000022009 1226 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Trappc6aQ78XR0 Rbks-201ENSMUST00000031018 1042 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Trappc6aQ78XR0 Nkx2-2-201ENSMUST00000067075 2120 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Trappc6aQ78XR0 Rbm38-201ENSMUST00000029014 1768 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Trappc6aQ78XR0 Ypel3-204ENSMUST00000106359 469 ntTSL 5 BASIC19.49■□□□□ 0.71
Trappc6aQ78XR0 Arl2bp-202ENSMUST00000109527 1133 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Trappc6aQ78XR0 Ndufb2-202ENSMUST00000119379 455 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Trappc6aQ78XR0 Prmt1-205ENSMUST00000207659 945 ntTSL 5 BASIC19.49■□□□□ 0.71
Trappc6aQ78XR0 Prmt1-201ENSMUST00000045325 1071 ntTSL 5 BASIC19.49■□□□□ 0.71
Trappc6aQ78XR0 Sh3bp1-203ENSMUST00000089378 2001 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Trappc6aQ78XR0 Phf12-202ENSMUST00000108360 3047 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Trappc6aQ78XR0 Khk-204ENSMUST00000201621 1583 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Trappc6aQ78XR0 Ccdc84-201ENSMUST00000053286 1725 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Trappc6aQ78XR0 Lypd3-201ENSMUST00000080718 1649 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Trappc6aQ78XR0 Lsm12-201ENSMUST00000021297 2256 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Trappc6aQ78XR0 Akt1-201ENSMUST00000001780 2690 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Trappc6aQ78XR0 Smkr-ps-202ENSMUST00000141679 901 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Trappc6aQ78XR0 Spr-202ENSMUST00000174286 775 ntTSL 2 BASIC19.48■□□□□ 0.71
Trappc6aQ78XR0 Uncx-202ENSMUST00000174792 1196 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Trappc6aQ78XR0 Snap91-203ENSMUST00000074501 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
Trappc6aQ78XR0 Syncrip-201ENSMUST00000069221 9450 ntAPPRIS P3 TSL 1 (best) BASIC19.48■□□□□ 0.71
Trappc6aQ78XR0 Htatip2-202ENSMUST00000207895 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
Trappc6aQ78XR0 Tssk6-201ENSMUST00000050373 1335 ntAPPRIS P1 BASIC19.48■□□□□ 0.71
Trappc6aQ78XR0 Cebpa-202ENSMUST00000205391 2161 ntTSL 5 BASIC19.47■□□□□ 0.71
Trappc6aQ78XR0 2410004B18Rik-201ENSMUST00000039571 1547 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Trappc6aQ78XR0 Hoxa11os-201ENSMUST00000134512 1839 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Trappc6aQ78XR0 Tab2-204ENSMUST00000146444 4380 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
Trappc6aQ78XR0 E130307A14Rik-208ENSMUST00000145971 830 ntTSL 3 BASIC19.47■□□□□ 0.71
Trappc6aQ78XR0 A230065N10Rik-201ENSMUST00000172178 1028 ntBASIC19.47■□□□□ 0.71
Trappc6aQ78XR0 Mir5133-201ENSMUST00000174955 77 ntBASIC19.47■□□□□ 0.71
Trappc6aQ78XR0 Fxyd1-215ENSMUST00000206474 572 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Trappc6aQ78XR0 Mcam-201ENSMUST00000034650 2989 ntAPPRIS P2 TSL 1 (best) BASIC19.47■□□□□ 0.71
Trappc6aQ78XR0 Mfap2-201ENSMUST00000071977 1073 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Trappc6aQ78XR0 Aplf-201ENSMUST00000032130 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Trappc6aQ78XR0 Serbp1-211ENSMUST00000204293 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
Trappc6aQ78XR0 Pcyt2-203ENSMUST00000106188 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
Trappc6aQ78XR0 Gyg-201ENSMUST00000118015 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
Trappc6aQ78XR0 Pi4kb-207ENSMUST00000167008 1962 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Trappc6aQ78XR0 Stbd1-201ENSMUST00000050952 1985 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Trappc6aQ78XR0 Sfr1-201ENSMUST00000099353 1583 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Trappc6aQ78XR0 Tmem54-203ENSMUST00000106064 1066 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
Trappc6aQ78XR0 Gnai2-203ENSMUST00000192837 421 ntTSL 5 BASIC19.46■□□□□ 0.71
Trappc6aQ78XR0 Gm10306-201ENSMUST00000094969 533 ntAPPRIS P1 BASIC19.46■□□□□ 0.71
Trappc6aQ78XR0 Spint1-202ENSMUST00000110816 1913 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
Trappc6aQ78XR0 Raph1-201ENSMUST00000027168 2241 ntAPPRIS ALT2 TSL 5 BASIC19.45■□□□□ 0.7
Trappc6aQ78XR0 Lrrc1-205ENSMUST00000183873 3121 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Trappc6aQ78XR0 Hdhd2-206ENSMUST00000145634 1585 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
Trappc6aQ78XR0 Atraid-201ENSMUST00000013766 966 ntAPPRIS P2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Trappc6aQ78XR0 1700003N22Rik-201ENSMUST00000194834 808 ntBASIC19.45■□□□□ 0.7
Trappc6aQ78XR0 Gm44732-201ENSMUST00000208055 635 ntTSL 3 BASIC19.45■□□□□ 0.7
Trappc6aQ78XR0 Fam228b-205ENSMUST00000218575 1281 ntAPPRIS ALT2 TSL 2 BASIC19.45■□□□□ 0.7
Trappc6aQ78XR0 Rxra-201ENSMUST00000077257 4905 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Trappc6aQ78XR0 Sdsl-201ENSMUST00000031594 1476 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Trappc6aQ78XR0 Has1-201ENSMUST00000003762 2090 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Trappc6aQ78XR0 Nkpd1-203ENSMUST00000214205 2309 ntAPPRIS ALT2 TSL 5 BASIC19.45■□□□□ 0.7
Trappc6aQ78XR0 Cep78-201ENSMUST00000047704 2548 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Trappc6aQ78XR0 Slc22a23-201ENSMUST00000040336 6251 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Trappc6aQ78XR0 Tssk2-201ENSMUST00000055374 1387 ntAPPRIS P1 BASIC19.44■□□□□ 0.7
Trappc6aQ78XR0 P2rx2-203ENSMUST00000195985 2096 ntAPPRIS P4 TSL 1 (best) BASIC19.44■□□□□ 0.7
Trappc6aQ78XR0 Rpusd3-202ENSMUST00000113092 1269 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Trappc6aQ78XR0 Med30-201ENSMUST00000037115 1007 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Trappc6aQ78XR0 Snrpc-201ENSMUST00000071006 870 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Trappc6aQ78XR0 Mau2-206ENSMUST00000212451 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Trappc6aQ78XR0 Tfg-201ENSMUST00000065515 1945 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Trappc6aQ78XR0 Thoc6-201ENSMUST00000047436 1504 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Trappc6aQ78XR0 Kmt2b-202ENSMUST00000108154 8454 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Trappc6aQ78XR0 Gm45015-201ENSMUST00000207943 1364 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
Trappc6aQ78XR0 Slc9a7-201ENSMUST00000072451 2512 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Trappc6aQ78XR0 Nxph4-201ENSMUST00000095266 1675 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Trappc6aQ78XR0 Acot8-202ENSMUST00000103094 1152 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Trappc6aQ78XR0 Gm12441-201ENSMUST00000121806 588 ntBASIC19.43■□□□□ 0.7
Trappc6aQ78XR0 Acot8-201ENSMUST00000017451 1055 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Trappc6aQ78XR0 Clip1-205ENSMUST00000111566 6133 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
Trappc6aQ78XR0 Retreg2-208ENSMUST00000190240 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Trappc6aQ78XR0 Suz12-201ENSMUST00000017692 4373 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
Trappc6aQ78XR0 2310034G01Rik-201ENSMUST00000189008 1373 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
Trappc6aQ78XR0 Pex16-201ENSMUST00000028650 1392 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Trappc6aQ78XR0 Gpn2-201ENSMUST00000030661 1367 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Trappc6aQ78XR0 Ypel1-201ENSMUST00000035682 3322 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Trappc6aQ78XR0 Syap1-201ENSMUST00000033723 2087 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Trappc6aQ78XR0 Olig3-201ENSMUST00000053225 2072 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
Trappc6aQ78XR0 Wnk2-204ENSMUST00000110096 6534 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
Trappc6aQ78XR0 Fezf2-201ENSMUST00000022262 2188 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Trappc6aQ78XR0 Tmem121-201ENSMUST00000058491 1574 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Trappc6aQ78XR0 Aktip-202ENSMUST00000120213 2200 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Trappc6aQ78XR0 Gm42555-201ENSMUST00000199304 1039 ntBASIC19.42■□□□□ 0.7
Trappc6aQ78XR0 Gm39115-201ENSMUST00000211350 699 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
Trappc6aQ78XR0 Cldn3-201ENSMUST00000094245 1259 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
Trappc6aQ78XR0 Ung-201ENSMUST00000031587 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Trappc6aQ78XR0 Cdc16-201ENSMUST00000043962 2301 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Trappc6aQ78XR0 Lzts2-202ENSMUST00000178087 2773 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Trappc6aQ78XR0 Osbp-201ENSMUST00000025590 4578 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
Trappc6aQ78XR0 Mindy2-202ENSMUST00000213380 2521 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Trappc6aQ78XR0 Lbx1-201ENSMUST00000099401 2484 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Trappc6aQ78XR0 Neurog1-201ENSMUST00000058475 1686 ntAPPRIS P1 BASIC19.41■□□□□ 0.7
Trappc6aQ78XR0 Gm3807-201ENSMUST00000193520 1168 ntBASIC19.41■□□□□ 0.7
Retrieved 100 of 76,532 protein–RNA pairs in 27.3 ms