Protein–RNA interactions for Protein: Q6P1Y1

Rtl3, Retrotransposon Gag-like protein 3, mousemouse

Predictions only

Length 553 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rtl3Q6P1Y1 Uckl1os-201ENSMUST00000122831 2018 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Rtl3Q6P1Y1 1700023F06Rik-202ENSMUST00000107026 1127 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
Rtl3Q6P1Y1 Krtap5-4-201ENSMUST00000061403 1046 ntAPPRIS P1 BASIC20.31■□□□□ 0.84
Rtl3Q6P1Y1 Mgat5b-201ENSMUST00000103027 4258 ntAPPRIS P1 TSL 5 BASIC20.31■□□□□ 0.84
Rtl3Q6P1Y1 Spint1-202ENSMUST00000110816 1913 ntAPPRIS P1 TSL 5 BASIC20.31■□□□□ 0.84
Rtl3Q6P1Y1 Ipmk-201ENSMUST00000079252 5447 ntAPPRIS P3 TSL 1 (best) BASIC20.31■□□□□ 0.84
Rtl3Q6P1Y1 Retreg2-201ENSMUST00000097694 2561 ntAPPRIS P3 TSL 1 (best) BASIC20.31■□□□□ 0.84
Rtl3Q6P1Y1 Asphd1-203ENSMUST00000106340 1647 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
Rtl3Q6P1Y1 Rasa1-201ENSMUST00000109552 4563 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Rtl3Q6P1Y1 Nsfl1c-202ENSMUST00000089140 1486 ntAPPRIS P3 TSL 5 BASIC20.3■□□□□ 0.84
Rtl3Q6P1Y1 Jkamp-202ENSMUST00000117449 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
Rtl3Q6P1Y1 Hsf1-207ENSMUST00000228371 2102 ntBASIC20.3■□□□□ 0.84
Rtl3Q6P1Y1 Wdfy1-202ENSMUST00000113510 704 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Rtl3Q6P1Y1 Wdfy1-203ENSMUST00000113511 704 ntTSL 5 BASIC20.3■□□□□ 0.84
Rtl3Q6P1Y1 Gm44731-201ENSMUST00000203086 542 ntTSL 3 BASIC20.3■□□□□ 0.84
Rtl3Q6P1Y1 Wdfy1-201ENSMUST00000048820 717 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Rtl3Q6P1Y1 Wnk2-201ENSMUST00000035538 6630 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
Rtl3Q6P1Y1 Tmem230-206ENSMUST00000180286 1531 ntAPPRIS P1 TSL 2 BASIC20.3■□□□□ 0.84
Rtl3Q6P1Y1 Zfp467-202ENSMUST00000114556 2287 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Rtl3Q6P1Y1 Crtc2-201ENSMUST00000029545 2747 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Rtl3Q6P1Y1 Hccs-202ENSMUST00000112115 2473 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Rtl3Q6P1Y1 Cpne2-202ENSMUST00000109537 2121 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
Rtl3Q6P1Y1 Cacna2d2-201ENSMUST00000010210 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
Rtl3Q6P1Y1 Prcd-201ENSMUST00000106381 724 ntTSL 3 BASIC20.29■□□□□ 0.84
Rtl3Q6P1Y1 Lmo1-202ENSMUST00000207178 912 ntAPPRIS ALT1 TSL 2 BASIC20.29■□□□□ 0.84
Rtl3Q6P1Y1 Gm20163-202ENSMUST00000212288 989 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Rtl3Q6P1Y1 Dtd2-202ENSMUST00000085404 1012 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Rtl3Q6P1Y1 Noc2l-201ENSMUST00000179543 2785 ntAPPRIS P2 TSL 1 (best) BASIC20.29■□□□□ 0.84
Rtl3Q6P1Y1 Ptger3-202ENSMUST00000173533 2097 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
Rtl3Q6P1Y1 Gm26682-201ENSMUST00000180850 1729 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Rtl3Q6P1Y1 K230010J24Rik-204ENSMUST00000187868 1810 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
Rtl3Q6P1Y1 1700030C10Rik-201ENSMUST00000110971 1471 ntBASIC20.29■□□□□ 0.84
Rtl3Q6P1Y1 Selenoo-201ENSMUST00000082439 2383 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Rtl3Q6P1Y1 Reep6-207ENSMUST00000186864 2015 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
Rtl3Q6P1Y1 Nrxn2-205ENSMUST00000113462 6667 ntAPPRIS P4 TSL 1 (best) BASIC20.29■□□□□ 0.84
Rtl3Q6P1Y1 Slc35f3-201ENSMUST00000108759 2309 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Rtl3Q6P1Y1 Dusp14-202ENSMUST00000100705 1447 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Rtl3Q6P1Y1 Rce1-201ENSMUST00000025823 1402 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Rtl3Q6P1Y1 Gm15043-201ENSMUST00000118843 1543 ntBASIC20.28■□□□□ 0.84
Rtl3Q6P1Y1 Stau2-201ENSMUST00000027052 2763 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Rtl3Q6P1Y1 Med31-201ENSMUST00000021157 1161 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Rtl3Q6P1Y1 Ntsr2-202ENSMUST00000220892 846 ntTSL 3 BASIC20.28■□□□□ 0.84
Rtl3Q6P1Y1 Zmym3-202ENSMUST00000117637 1593 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Rtl3Q6P1Y1 Gm12524-201ENSMUST00000143109 1583 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Rtl3Q6P1Y1 D11Wsu47e-201ENSMUST00000042227 2196 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Rtl3Q6P1Y1 Gm5577-201ENSMUST00000134600 1434 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Rtl3Q6P1Y1 AC165080.2-201ENSMUST00000217491 1530 ntBASIC20.27■□□□□ 0.84
Rtl3Q6P1Y1 Sfmbt2-204ENSMUST00000114864 1901 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Rtl3Q6P1Y1 Lsm14a-201ENSMUST00000085585 2944 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Rtl3Q6P1Y1 Otud5-203ENSMUST00000115666 2471 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
Rtl3Q6P1Y1 Ldb1-202ENSMUST00000056931 2295 ntAPPRIS P2 TSL 1 (best) BASIC20.27■□□□□ 0.84
Rtl3Q6P1Y1 Dtnb-216ENSMUST00000173736 2175 ntAPPRIS ALT2 TSL 5 BASIC20.27■□□□□ 0.84
Rtl3Q6P1Y1 Syap1-201ENSMUST00000033723 2087 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Rtl3Q6P1Y1 Tmem51-201ENSMUST00000036572 1875 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Rtl3Q6P1Y1 Gnas-205ENSMUST00000109083 730 ntTSL 2 BASIC20.27■□□□□ 0.84
Rtl3Q6P1Y1 Rtn4rl2-201ENSMUST00000054514 1263 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Rtl3Q6P1Y1 Mxi1-202ENSMUST00000025998 4996 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Rtl3Q6P1Y1 Mal2-201ENSMUST00000025356 2950 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
Rtl3Q6P1Y1 Tmem234-201ENSMUST00000102591 1437 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
Rtl3Q6P1Y1 Gabpb1-203ENSMUST00000103226 1338 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
Rtl3Q6P1Y1 Msl3l2-201ENSMUST00000063138 2140 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Rtl3Q6P1Y1 Baiap2-201ENSMUST00000026436 2394 ntAPPRIS P4 TSL 1 (best) BASIC20.26■□□□□ 0.83
Rtl3Q6P1Y1 Dusp26-205ENSMUST00000170204 1627 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
Rtl3Q6P1Y1 Aplp1-201ENSMUST00000006828 2343 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Rtl3Q6P1Y1 Triobp-202ENSMUST00000109688 2553 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
Rtl3Q6P1Y1 Espn-210ENSMUST00000105656 1593 ntTSL 5 BASIC20.25■□□□□ 0.83
Rtl3Q6P1Y1 Ankrd9-203ENSMUST00000135131 1563 ntAPPRIS P2 TSL 1 (best) BASIC20.25■□□□□ 0.83
Rtl3Q6P1Y1 Mum1-201ENSMUST00000020365 2640 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Rtl3Q6P1Y1 Glipr2-201ENSMUST00000030202 2320 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Rtl3Q6P1Y1 Acvrl1-202ENSMUST00000117984 1852 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
Rtl3Q6P1Y1 Rpusd3-204ENSMUST00000129047 1045 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
Rtl3Q6P1Y1 Smad6-203ENSMUST00000179458 273 ntBASIC20.25■□□□□ 0.83
Rtl3Q6P1Y1 4930467K11Rik-201ENSMUST00000180831 723 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Rtl3Q6P1Y1 Ctf1-204ENSMUST00000206506 784 ntTSL 2 BASIC20.25■□□□□ 0.83
Rtl3Q6P1Y1 Gtsf1-201ENSMUST00000023129 819 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Rtl3Q6P1Y1 Gpx7-201ENSMUST00000030332 1289 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Rtl3Q6P1Y1 Rpusd3-201ENSMUST00000060634 1224 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Rtl3Q6P1Y1 Hyi-201ENSMUST00000006562 910 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
Rtl3Q6P1Y1 Sap18b-201ENSMUST00000074053 789 ntAPPRIS P1 BASIC20.25■□□□□ 0.83
Rtl3Q6P1Y1 Cblc-201ENSMUST00000043822 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Rtl3Q6P1Y1 Cdkn3-203ENSMUST00000227149 1952 ntBASIC20.25■□□□□ 0.83
Rtl3Q6P1Y1 Kctd20-204ENSMUST00000122163 2423 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
Rtl3Q6P1Y1 Usp2-202ENSMUST00000065461 2057 ntAPPRIS P2 TSL 1 (best) BASIC20.24■□□□□ 0.83
Rtl3Q6P1Y1 Maf1-205ENSMUST00000160853 1651 ntAPPRIS P2 TSL 1 (best) BASIC20.24■□□□□ 0.83
Rtl3Q6P1Y1 Gm26833-201ENSMUST00000180899 440 ntBASIC20.24■□□□□ 0.83
Rtl3Q6P1Y1 Gm5874-201ENSMUST00000096101 508 ntBASIC20.24■□□□□ 0.83
Rtl3Q6P1Y1 Slc9a2-201ENSMUST00000027231 5019 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Rtl3Q6P1Y1 Ttc9b-201ENSMUST00000008088 2052 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Rtl3Q6P1Y1 Kcng2-201ENSMUST00000077962 2813 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
Rtl3Q6P1Y1 Impa2-201ENSMUST00000025403 1661 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Rtl3Q6P1Y1 Ptpre-202ENSMUST00000209256 2593 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Rtl3Q6P1Y1 Gm43909-201ENSMUST00000203443 1876 ntBASIC20.23■□□□□ 0.83
Rtl3Q6P1Y1 Gm40848-201ENSMUST00000221998 324 ntBASIC20.23■□□□□ 0.83
Rtl3Q6P1Y1 Gpr3-201ENSMUST00000052090 1116 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Rtl3Q6P1Y1 Nrxn2-201ENSMUST00000077182 6059 ntAPPRIS ALT2 TSL 5 BASIC20.23■□□□□ 0.83
Rtl3Q6P1Y1 Stac3-201ENSMUST00000035839 1790 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Rtl3Q6P1Y1 Moap1-201ENSMUST00000173760 1312 ntAPPRIS P1 TSL 2 BASIC20.23■□□□□ 0.83
Rtl3Q6P1Y1 Uqcrc1-201ENSMUST00000026743 1653 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Rtl3Q6P1Y1 Pbx1-202ENSMUST00000072863 1709 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Rtl3Q6P1Y1 Smkr-ps-202ENSMUST00000141679 901 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Retrieved 100 of 76,532 protein–RNA pairs in 34.6 ms