Protein–RNA interactions for Protein: Q03958

Pfdn6, Prefoldin subunit 6, mousemouse

Predictions only

Length 127 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pfdn6Q03958 Arpp19-206ENSMUST00000168301 599 ntTSL 5 BASIC19.67■□□□□ 0.74
Pfdn6Q03958 Sumf1-206ENSMUST00000172188 723 ntTSL 5 BASIC19.67■□□□□ 0.74
Pfdn6Q03958 Kiss1-205ENSMUST00000195286 656 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Pfdn6Q03958 Rnf187-202ENSMUST00000217262 711 ntAPPRIS P2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Pfdn6Q03958 Hoxb7-201ENSMUST00000049352 1291 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Pfdn6Q03958 Rnaset2b-201ENSMUST00000089119 1013 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Pfdn6Q03958 Pgam5-201ENSMUST00000059229 2044 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
Pfdn6Q03958 Ppm1b-201ENSMUST00000080217 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Pfdn6Q03958 Foxo3-202ENSMUST00000105501 1316 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Pfdn6Q03958 Slc35b2-201ENSMUST00000041353 2326 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Pfdn6Q03958 Rgs19-201ENSMUST00000002532 1511 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Pfdn6Q03958 Agpat3-201ENSMUST00000001240 5980 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Pfdn6Q03958 Lig3-204ENSMUST00000131537 1782 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Pfdn6Q03958 Lig3-209ENSMUST00000173009 1785 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Pfdn6Q03958 Bex1-202ENSMUST00000113118 754 ntAPPRIS P1 TSL 2 BASIC19.66■□□□□ 0.74
Pfdn6Q03958 Mapkapk3-208ENSMUST00000192054 944 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Pfdn6Q03958 Smco4-203ENSMUST00000215907 994 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Pfdn6Q03958 Gltpd2-201ENSMUST00000057685 1216 ntAPPRIS P2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Pfdn6Q03958 Tial1-209ENSMUST00000141126 1344 ntTSL 5 BASIC19.66■□□□□ 0.74
Pfdn6Q03958 Ccdc149-202ENSMUST00000198008 2470 ntTSL 5 BASIC19.66■□□□□ 0.74
Pfdn6Q03958 Bhlhe23-201ENSMUST00000108878 2520 ntAPPRIS P1 BASIC19.66■□□□□ 0.74
Pfdn6Q03958 Mtfr1l-201ENSMUST00000102550 2025 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Pfdn6Q03958 Uckl1os-201ENSMUST00000122831 2018 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Pfdn6Q03958 Htra2-202ENSMUST00000113962 1305 ntTSL 5 BASIC19.65■□□□□ 0.74
Pfdn6Q03958 Aplp1-201ENSMUST00000006828 2343 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Pfdn6Q03958 Evi5l-209ENSMUST00000177053 1542 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
Pfdn6Q03958 Gm43909-201ENSMUST00000203443 1876 ntBASIC19.65■□□□□ 0.74
Pfdn6Q03958 Arhgap21-201ENSMUST00000114594 7351 ntAPPRIS ALT2 TSL 5 BASIC19.64■□□□□ 0.74
Pfdn6Q03958 Zyg11a-202ENSMUST00000106690 2421 ntAPPRIS ALT2 TSL 5 BASIC19.64■□□□□ 0.74
Pfdn6Q03958 Ube2d2a-202ENSMUST00000170693 2483 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
Pfdn6Q03958 Adgra2-201ENSMUST00000033876 5760 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
Pfdn6Q03958 Noc2l-201ENSMUST00000179543 2785 ntAPPRIS P2 TSL 1 (best) BASIC19.64■□□□□ 0.73
Pfdn6Q03958 Hotairm1-201ENSMUST00000129546 409 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Pfdn6Q03958 Bcl2l10-201ENSMUST00000034709 1220 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Pfdn6Q03958 Kcnk1-202ENSMUST00000212831 1309 ntTSL 5 BASIC19.64■□□□□ 0.73
Pfdn6Q03958 Arhgap27-202ENSMUST00000092557 1504 ntTSL 2 BASIC19.64■□□□□ 0.73
Pfdn6Q03958 Sys1-202ENSMUST00000109352 2001 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.73
Pfdn6Q03958 Lsm14a-201ENSMUST00000085585 2944 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Pfdn6Q03958 2310022B05Rik-201ENSMUST00000034464 3307 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Pfdn6Q03958 Mafg-201ENSMUST00000058162 4923 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Pfdn6Q03958 Ankle2-202ENSMUST00000086674 5025 ntAPPRIS ALT2 TSL 5 BASIC19.64■□□□□ 0.73
Pfdn6Q03958 Hoxc11-201ENSMUST00000001701 2021 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Pfdn6Q03958 Gm27045-201ENSMUST00000182145 1402 ntBASIC19.63■□□□□ 0.73
Pfdn6Q03958 Gemin7-203ENSMUST00000119912 653 ntAPPRIS P1 TSL 3 BASIC19.63■□□□□ 0.73
Pfdn6Q03958 Polr1d-201ENSMUST00000050970 1196 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Pfdn6Q03958 Sdsl-202ENSMUST00000052258 1225 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Pfdn6Q03958 Irgq-201ENSMUST00000049020 6083 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Pfdn6Q03958 St7l-201ENSMUST00000059271 5728 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
Pfdn6Q03958 Nlgn2-202ENSMUST00000108634 5568 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Pfdn6Q03958 Rabgap1l-216ENSMUST00000195442 1877 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Pfdn6Q03958 Dhx36-201ENSMUST00000029336 5620 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Pfdn6Q03958 Hoxd13-201ENSMUST00000001872 2483 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Pfdn6Q03958 Uba5-201ENSMUST00000035166 2404 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Pfdn6Q03958 Whrn-204ENSMUST00000095037 2419 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Pfdn6Q03958 Mfsd6-205ENSMUST00000156876 4932 ntAPPRIS P4 TSL 5 BASIC19.62■□□□□ 0.73
Pfdn6Q03958 Ung-202ENSMUST00000102584 2136 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
Pfdn6Q03958 D630002J18Rik-201ENSMUST00000181854 1115 ntBASIC19.62■□□□□ 0.73
Pfdn6Q03958 Pawr-202ENSMUST00000218332 870 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Pfdn6Q03958 Gm9847-201ENSMUST00000052528 599 ntBASIC19.62■□□□□ 0.73
Pfdn6Q03958 Ttc9b-201ENSMUST00000008088 2052 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Pfdn6Q03958 Otud1-201ENSMUST00000052168 2832 ntAPPRIS P1 BASIC19.62■□□□□ 0.73
Pfdn6Q03958 Gm34220-201ENSMUST00000223001 2709 ntBASIC19.62■□□□□ 0.73
Pfdn6Q03958 Lpar3-201ENSMUST00000039164 2464 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Pfdn6Q03958 Tedc1-201ENSMUST00000049271 2441 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Pfdn6Q03958 Hdhd2-206ENSMUST00000145634 1585 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
Pfdn6Q03958 Rora-202ENSMUST00000113624 2591 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Pfdn6Q03958 Sae1-201ENSMUST00000094815 1875 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Pfdn6Q03958 Alg9-201ENSMUST00000034561 2873 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Pfdn6Q03958 Ankra2-205ENSMUST00000150916 1028 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Pfdn6Q03958 Tor3a-208ENSMUST00000190607 453 ntTSL 3 BASIC19.61■□□□□ 0.73
Pfdn6Q03958 Rragd-203ENSMUST00000098190 5008 ntAPPRIS P1 TSL 2 BASIC19.61■□□□□ 0.73
Pfdn6Q03958 Wdsub1-202ENSMUST00000102751 1526 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Pfdn6Q03958 Ldb1-202ENSMUST00000056931 2295 ntAPPRIS P2 TSL 1 (best) BASIC19.6■□□□□ 0.73
Pfdn6Q03958 Pbx1-206ENSMUST00000176790 1828 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Pfdn6Q03958 Spns2-201ENSMUST00000045303 3241 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Pfdn6Q03958 Lacc1-201ENSMUST00000062789 2444 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Pfdn6Q03958 Krtap5-3-202ENSMUST00000187512 1652 ntAPPRIS P2 BASIC19.6■□□□□ 0.73
Pfdn6Q03958 Usf2-203ENSMUST00000162228 960 ntTSL 5 BASIC19.6■□□□□ 0.73
Pfdn6Q03958 Gm9207-201ENSMUST00000198773 1115 ntBASIC19.6■□□□□ 0.73
Pfdn6Q03958 Serbp1-212ENSMUST00000204294 717 ntTSL 5 BASIC19.6■□□□□ 0.73
Pfdn6Q03958 Svbp-201ENSMUST00000030395 733 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Pfdn6Q03958 Tspan5-201ENSMUST00000029800 6653 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Pfdn6Q03958 Rbm7-201ENSMUST00000170000 1773 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Pfdn6Q03958 Notch4-201ENSMUST00000015612 6591 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Pfdn6Q03958 Cav2-201ENSMUST00000000058 2733 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Pfdn6Q03958 Gm15441-202ENSMUST00000107095 1653 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Pfdn6Q03958 Zbtb7a-204ENSMUST00000121840 1676 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Pfdn6Q03958 Matr3-209ENSMUST00000188275 1951 ntTSL 5 BASIC19.59■□□□□ 0.73
Pfdn6Q03958 Csnk1a1-207ENSMUST00000166990 1860 ntTSL 5 BASIC19.59■□□□□ 0.73
Pfdn6Q03958 H2-Q7-204ENSMUST00000116598 1134 ntTSL 5 BASIC19.59■□□□□ 0.73
Pfdn6Q03958 Siglec15-201ENSMUST00000170760 1156 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Pfdn6Q03958 Rasef-203ENSMUST00000222414 2127 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
Pfdn6Q03958 6330562C20Rik-201ENSMUST00000098867 784 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Pfdn6Q03958 Pink1-201ENSMUST00000030536 2375 ntAPPRIS P2 TSL 1 (best) BASIC19.59■□□□□ 0.73
Pfdn6Q03958 Dmrta2-201ENSMUST00000061187 2922 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Pfdn6Q03958 Chd5-202ENSMUST00000030775 9486 ntAPPRIS P3 TSL 5 BASIC19.59■□□□□ 0.73
Pfdn6Q03958 Syt6-205ENSMUST00000121834 1710 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Pfdn6Q03958 Gm26682-201ENSMUST00000180850 1729 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Pfdn6Q03958 Upf1-201ENSMUST00000075666 4618 ntAPPRIS P2 TSL 1 (best) BASIC19.59■□□□□ 0.73
Pfdn6Q03958 Paxip1-201ENSMUST00000002291 5850 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Retrieved 100 of 76,532 protein–RNA pairs in 57.8 ms