Protein–RNA interactions for Protein: P35546

Ret, Proto-oncogene tyrosine-protein kinase receptor Ret, mousemouse

Predictions only

Length 1,115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RetP35546 Gm28050-202ENSMUST00000131029 663 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
RetP35546 Fbxl15-202ENSMUST00000177667 1243 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
RetP35546 Cadm1-201ENSMUST00000034581 1254 ntAPPRIS ALT1 TSL 1 (best) BASIC18.37■□□□□ 0.53
RetP35546 Cdkl3-204ENSMUST00000109077 2605 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
RetP35546 AC166356.1-201ENSMUST00000228236 1426 ntBASIC18.37■□□□□ 0.53
RetP35546 Sephs1-202ENSMUST00000115019 2933 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
RetP35546 Slc25a3-203ENSMUST00000164505 1483 ntAPPRIS P2 TSL 5 BASIC18.37■□□□□ 0.53
RetP35546 Camk1-201ENSMUST00000032409 1496 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
RetP35546 Kdm1a-203ENSMUST00000116273 3008 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
RetP35546 Aatf-201ENSMUST00000018841 1822 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
RetP35546 Shisa5-202ENSMUST00000112059 1910 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
RetP35546 Ndel1-201ENSMUST00000018880 2382 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
RetP35546 Pink1-201ENSMUST00000030536 2375 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
RetP35546 Kifc3-201ENSMUST00000034240 3277 ntAPPRIS P4 TSL 1 (best) BASIC18.36■□□□□ 0.53
RetP35546 2310022B05Rik-201ENSMUST00000034464 3307 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
RetP35546 Smox-202ENSMUST00000110179 1320 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
RetP35546 Gm5577-201ENSMUST00000134600 1434 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
RetP35546 Gm43173-201ENSMUST00000202246 593 ntBASIC18.36■□□□□ 0.53
RetP35546 Mob2-205ENSMUST00000211000 1646 ntTSL 5 BASIC18.36■□□□□ 0.53
RetP35546 Bax-205ENSMUST00000211365 801 ntTSL 3 BASIC18.36■□□□□ 0.53
RetP35546 Pbx1-202ENSMUST00000072863 1709 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
RetP35546 Sae1-201ENSMUST00000094815 1875 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
RetP35546 Hipk1-201ENSMUST00000029438 4185 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
RetP35546 Fpgs-201ENSMUST00000028148 2273 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
RetP35546 Nrg3-203ENSMUST00000173780 2137 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
RetP35546 Ltk-202ENSMUST00000082130 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
RetP35546 D830025C05Rik-201ENSMUST00000059474 976 ntBASIC18.35■□□□□ 0.53
RetP35546 Slc16a10-201ENSMUST00000092566 5397 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
RetP35546 Paip1-201ENSMUST00000026520 2551 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
RetP35546 Arhgap8-207ENSMUST00000172307 1544 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
RetP35546 Coq10a-201ENSMUST00000043211 1421 ntAPPRIS P2 TSL 5 BASIC18.34■□□□□ 0.53
RetP35546 Arhgap27os2-201ENSMUST00000123812 1390 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
RetP35546 Elf2-212ENSMUST00000194641 5919 ntAPPRIS P3 TSL 5 BASIC18.34■□□□□ 0.53
RetP35546 Qsox2-201ENSMUST00000036187 2559 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
RetP35546 2310061I04Rik-203ENSMUST00000148482 1193 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
RetP35546 Tmbim6-202ENSMUST00000159209 944 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
RetP35546 E030030I06Rik-201ENSMUST00000069372 876 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
RetP35546 Krtap5-3-201ENSMUST00000084414 1074 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
RetP35546 Cep78-201ENSMUST00000047704 2548 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
RetP35546 Uba5-201ENSMUST00000035166 2404 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
RetP35546 Mal2-201ENSMUST00000025356 2950 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
RetP35546 Rbm38-201ENSMUST00000029014 1768 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
RetP35546 Uap1-202ENSMUST00000111350 2311 ntAPPRIS ALT1 TSL 1 (best) BASIC18.34■□□□□ 0.53
RetP35546 Lpcat3-201ENSMUST00000004381 2281 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
RetP35546 Gsx2-201ENSMUST00000040477 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
RetP35546 Zfp523-202ENSMUST00000073534 2654 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
RetP35546 Bag5-201ENSMUST00000054636 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
RetP35546 Ttc9b-201ENSMUST00000008088 2052 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
RetP35546 Rora-202ENSMUST00000113624 2591 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
RetP35546 Spock1-204ENSMUST00000186271 2005 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.53
RetP35546 Gm26660-201ENSMUST00000181582 2543 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
RetP35546 Stx18-202ENSMUST00000042146 1473 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
RetP35546 Ubald2-201ENSMUST00000057676 1482 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
RetP35546 Klrg2-201ENSMUST00000096030 2276 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.53
RetP35546 Mknk2-205ENSMUST00000200082 3439 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.52
RetP35546 Gpatch3-201ENSMUST00000030662 2004 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
RetP35546 Hpdl-201ENSMUST00000055436 1804 ntAPPRIS P1 BASIC18.33■□□□□ 0.52
RetP35546 Spns2-201ENSMUST00000045303 3241 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
RetP35546 Rhbdd3-201ENSMUST00000036320 1790 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
RetP35546 Ccdc149-202ENSMUST00000198008 2470 ntTSL 5 BASIC18.32■□□□□ 0.52
RetP35546 Hras-201ENSMUST00000026572 2828 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
RetP35546 Rapgefl1-202ENSMUST00000107479 4855 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
RetP35546 Wnt16-203ENSMUST00000148639 1168 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
RetP35546 Gins3-202ENSMUST00000212434 654 ntTSL 2 BASIC18.32■□□□□ 0.52
RetP35546 Gm26571-205ENSMUST00000223215 591 ntTSL 3 BASIC18.32■□□□□ 0.52
RetP35546 Ccng2-201ENSMUST00000031331 2810 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
RetP35546 Dedd2-201ENSMUST00000058702 1828 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
RetP35546 Fgfr2-217ENSMUST00000124096 2425 ntTSL 5 BASIC18.32■□□□□ 0.52
RetP35546 Rdh14-201ENSMUST00000020947 1480 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
RetP35546 Catsper2-201ENSMUST00000038073 2247 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
RetP35546 Neurl4-213ENSMUST00000177476 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
RetP35546 Dap-205ENSMUST00000186547 535 ntTSL 3 BASIC18.31■□□□□ 0.52
RetP35546 Cdc34b-202ENSMUST00000188741 1252 ntBASIC18.31■□□□□ 0.52
RetP35546 Cdc34-201ENSMUST00000020550 1266 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
RetP35546 Cdc34b-201ENSMUST00000021240 1233 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
RetP35546 Cdkn2a-201ENSMUST00000060501 852 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
RetP35546 Dmrta2-201ENSMUST00000061187 2922 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
RetP35546 Rbm7-201ENSMUST00000170000 1773 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
RetP35546 Laptm4a-201ENSMUST00000020909 1773 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
RetP35546 Exosc4-201ENSMUST00000059045 1796 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
RetP35546 Rhoq-201ENSMUST00000024956 4151 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
RetP35546 Hyal2-203ENSMUST00000193747 1532 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
RetP35546 Stau2-217ENSMUST00000162751 3030 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
RetP35546 Klhl15-205ENSMUST00000113916 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
RetP35546 Rhov-201ENSMUST00000037360 1703 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
RetP35546 Ppp6r2-202ENSMUST00000226221 2559 ntBASIC18.3■□□□□ 0.52
RetP35546 Gm10941-201ENSMUST00000105408 708 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
RetP35546 Gm42569-201ENSMUST00000200539 472 ntBASIC18.3■□□□□ 0.52
RetP35546 Zfp125-203ENSMUST00000208744 928 ntTSL 5 BASIC18.3■□□□□ 0.52
RetP35546 Fbxo2-201ENSMUST00000047951 1288 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
RetP35546 Zbtb4-203ENSMUST00000108640 4067 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
RetP35546 Mms22l-205ENSMUST00000138567 1350 ntTSL 2 BASIC18.3■□□□□ 0.52
RetP35546 Fgfrl1-202ENSMUST00000112560 2318 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
RetP35546 Gabpb1-203ENSMUST00000103226 1338 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
RetP35546 Mtfmt-201ENSMUST00000074792 2042 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
RetP35546 Gm26833-201ENSMUST00000180899 440 ntBASIC18.29■□□□□ 0.52
RetP35546 Gm27405-201ENSMUST00000184201 112 ntBASIC18.29■□□□□ 0.52
RetP35546 Gm7160-202ENSMUST00000188519 1027 ntBASIC18.29■□□□□ 0.52
RetP35546 Tor3a-208ENSMUST00000190607 453 ntTSL 3 BASIC18.29■□□□□ 0.52
RetP35546 Gm9970-201ENSMUST00000068997 558 ntAPPRIS P1 BASIC18.29■□□□□ 0.52
Retrieved 100 of 76,532 protein–RNA pairs in 65.4 ms