Protein–RNA interactions for Protein: P13705

Msh3, DNA mismatch repair protein Msh3, mousemouse

Predictions only

Length 1,091 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msh3P13705 Galnt11-201ENSMUST00000045737 2552 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Msh3P13705 Hnrnpf-202ENSMUST00000163168 2401 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Msh3P13705 Rce1-201ENSMUST00000025823 1402 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Msh3P13705 Tbc1d24-201ENSMUST00000024931 4894 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Msh3P13705 1700023F06Rik-202ENSMUST00000107026 1127 ntAPPRIS ALT2 TSL 1 (best) BASIC21.72■■□□□ 1.07
Msh3P13705 Flvcr1-202ENSMUST00000191946 1216 ntBASIC21.72■■□□□ 1.07
Msh3P13705 AC158777.2-201ENSMUST00000228787 398 ntAPPRIS P1 BASIC21.72■■□□□ 1.07
Msh3P13705 Ltbr-201ENSMUST00000032489 2107 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Msh3P13705 Ss18l2-201ENSMUST00000035113 577 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Msh3P13705 Siah2-201ENSMUST00000070368 2511 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Msh3P13705 Golph3-202ENSMUST00000226517 2359 ntBASIC21.72■■□□□ 1.07
Msh3P13705 Spns2-201ENSMUST00000045303 3241 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Msh3P13705 Taf3-203ENSMUST00000114907 695 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
Msh3P13705 Gm7160-202ENSMUST00000188519 1027 ntBASIC21.71■■□□□ 1.07
Msh3P13705 Ak2-202ENSMUST00000102604 1781 ntAPPRIS ALT1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Msh3P13705 Hexa-201ENSMUST00000026262 1996 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.07
Msh3P13705 Gsc-201ENSMUST00000021513 1268 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Msh3P13705 Rps7-203ENSMUST00000221871 820 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Msh3P13705 Deptor-203ENSMUST00000100660 1377 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
Msh3P13705 Hsf1-204ENSMUST00000226872 2104 ntBASIC21.7■■□□□ 1.06
Msh3P13705 Ubtf-213ENSMUST00000178839 4580 ntAPPRIS ALT2 TSL 1 (best) BASIC21.7■■□□□ 1.06
Msh3P13705 Pla2g12a-201ENSMUST00000029629 1561 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Msh3P13705 Spg7-211ENSMUST00000153285 2481 ntAPPRIS ALT2 TSL 5 BASIC21.69■■□□□ 1.06
Msh3P13705 Rtn4-210ENSMUST00000170731 1272 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
Msh3P13705 Gm27454-201ENSMUST00000185090 204 ntBASIC21.69■■□□□ 1.06
Msh3P13705 Dtymk-201ENSMUST00000027503 1003 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Msh3P13705 Bag1-202ENSMUST00000108089 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC21.69■■□□□ 1.06
Msh3P13705 Flot2-203ENSMUST00000100784 2699 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
Msh3P13705 Sigmar1-201ENSMUST00000059354 1640 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Msh3P13705 Samd10-201ENSMUST00000060173 2164 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Msh3P13705 Krt76-201ENSMUST00000100179 2312 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Msh3P13705 Gm12821-201ENSMUST00000120022 600 ntBASIC21.68■■□□□ 1.06
Msh3P13705 Cdv3-ps-201ENSMUST00000169632 827 ntBASIC21.68■■□□□ 1.06
Msh3P13705 AB124611-203ENSMUST00000173769 1188 ntAPPRIS P3 TSL 1 (best) BASIC21.68■■□□□ 1.06
Msh3P13705 Gon7-201ENSMUST00000173969 1152 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Msh3P13705 Bsg-205ENSMUST00000179781 1261 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
Msh3P13705 Gm43173-201ENSMUST00000202246 593 ntBASIC21.68■■□□□ 1.06
Msh3P13705 Krtap5-2-201ENSMUST00000067978 937 ntAPPRIS ALT2 TSL 5 BASIC21.68■■□□□ 1.06
Msh3P13705 Krtap5-2-202ENSMUST00000190456 1471 ntAPPRIS P2 BASIC21.68■■□□□ 1.06
Msh3P13705 Lypla2-202ENSMUST00000105852 1588 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Msh3P13705 Nat14-201ENSMUST00000047309 1612 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Msh3P13705 Cblc-201ENSMUST00000043822 1662 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Msh3P13705 Gnb5-206ENSMUST00000215875 2105 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Msh3P13705 Arl5a-201ENSMUST00000036541 5239 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Msh3P13705 Daxx-202ENSMUST00000170075 2673 ntAPPRIS P2 TSL 1 (best) BASIC21.67■■□□□ 1.06
Msh3P13705 Hoxd13-201ENSMUST00000001872 2483 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Msh3P13705 Wipi2-202ENSMUST00000110778 1959 ntAPPRIS P1 TSL 5 BASIC21.67■■□□□ 1.06
Msh3P13705 2810001G20Rik-202ENSMUST00000146333 959 ntTSL 3 BASIC21.67■■□□□ 1.06
Msh3P13705 Chtop-202ENSMUST00000049937 2012 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Msh3P13705 Rbfox3-202ENSMUST00000069343 1553 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
Msh3P13705 Syde2-201ENSMUST00000039517 5495 ntAPPRIS P2 TSL 1 (best) BASIC21.66■■□□□ 1.06
Msh3P13705 Eif5a-202ENSMUST00000070996 1373 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Msh3P13705 Snrpa-201ENSMUST00000080356 1365 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Msh3P13705 Srsf1-202ENSMUST00000107920 1209 ntTSL 5 BASIC21.66■■□□□ 1.06
Msh3P13705 Tusc3-202ENSMUST00000169034 1262 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
Msh3P13705 Sox8-202ENSMUST00000173447 928 ntAPPRIS ALT2 TSL 1 (best) BASIC21.66■■□□□ 1.06
Msh3P13705 Wdr70-203ENSMUST00000227371 1130 ntBASIC21.66■■□□□ 1.06
Msh3P13705 Bri3-201ENSMUST00000056578 955 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Msh3P13705 Krtap5-5-201ENSMUST00000097942 1177 ntAPPRIS P1 BASIC21.66■■□□□ 1.06
Msh3P13705 Rnf111-204ENSMUST00000213647 4961 ntAPPRIS ALT2 TSL 1 (best) BASIC21.66■■□□□ 1.06
Msh3P13705 Strn3-201ENSMUST00000013130 3046 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Msh3P13705 Map4k3-202ENSMUST00000112389 4231 ntAPPRIS ALT1 TSL 5 BASIC21.66■■□□□ 1.06
Msh3P13705 Six5-201ENSMUST00000049454 3007 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Msh3P13705 5033417F24Rik-201ENSMUST00000181575 1787 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
Msh3P13705 6820408C15Rik-201ENSMUST00000039961 1684 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Msh3P13705 Dvl3-203ENSMUST00000171572 2493 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
Msh3P13705 Kcnc3-201ENSMUST00000107906 5062 ntAPPRIS ALT2 TSL 1 (best) BASIC21.65■■□□□ 1.06
Msh3P13705 Hpca-204ENSMUST00000116444 1847 ntAPPRIS P1 TSL 5 BASIC21.64■■□□□ 1.06
Msh3P13705 Polr1d-202ENSMUST00000110557 1137 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
Msh3P13705 Pkig-204ENSMUST00000126182 762 ntAPPRIS P1 TSL 2 BASIC21.64■■□□□ 1.05
Msh3P13705 Mir7075-201ENSMUST00000184187 82 ntBASIC21.64■■□□□ 1.05
Msh3P13705 Appbp2os-202ENSMUST00000206972 447 ntBASIC21.64■■□□□ 1.05
Msh3P13705 Gm3448-202ENSMUST00000097400 747 ntAPPRIS ALT2 TSL 5 BASIC21.64■■□□□ 1.05
Msh3P13705 Supv3l1-201ENSMUST00000020273 2604 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Msh3P13705 Gm43545-201ENSMUST00000196765 2779 ntBASIC21.64■■□□□ 1.05
Msh3P13705 St3gal4-201ENSMUST00000034537 2095 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Msh3P13705 Ahsa2-201ENSMUST00000020529 3023 ntAPPRIS P3 TSL 1 (best) BASIC21.64■■□□□ 1.05
Msh3P13705 Fkbp9-201ENSMUST00000031795 3009 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Msh3P13705 Kazald1-201ENSMUST00000026234 1380 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Msh3P13705 Gm42911-201ENSMUST00000199360 1630 ntBASIC21.63■■□□□ 1.05
Msh3P13705 Espn-210ENSMUST00000105656 1593 ntTSL 5 BASIC21.63■■□□□ 1.05
Msh3P13705 Zfp36l1-204ENSMUST00000219642 545 ntTSL 3 BASIC21.63■■□□□ 1.05
Msh3P13705 AC165080.2-201ENSMUST00000217491 1530 ntBASIC21.63■■□□□ 1.05
Msh3P13705 Ttc39a-203ENSMUST00000106619 1778 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
Msh3P13705 2310022B05Rik-201ENSMUST00000034464 3307 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Msh3P13705 Fkbp1a-201ENSMUST00000044011 1658 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Msh3P13705 Pthlh-201ENSMUST00000052296 1603 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Msh3P13705 Nckap1-202ENSMUST00000111760 4597 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
Msh3P13705 Sebox-202ENSMUST00000125670 1300 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
Msh3P13705 Ccdc85c-201ENSMUST00000136175 1302 ntAPPRIS ALT2 TSL 5 BASIC21.62■■□□□ 1.05
Msh3P13705 Rela-201ENSMUST00000025867 2716 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Msh3P13705 Eif2b4-202ENSMUST00000114603 1966 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
Msh3P13705 Bola1-202ENSMUST00000107099 995 ntAPPRIS P1 TSL 2 BASIC21.62■■□□□ 1.05
Msh3P13705 Bola1-201ENSMUST00000016087 729 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Msh3P13705 Bola1-203ENSMUST00000177442 692 ntAPPRIS P1 TSL 3 BASIC21.62■■□□□ 1.05
Msh3P13705 1700007K13Rik-201ENSMUST00000086370 812 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Msh3P13705 Magi2-201ENSMUST00000088516 4843 ntAPPRIS P2 TSL 5 BASIC21.61■■□□□ 1.05
Msh3P13705 Parl-201ENSMUST00000048642 1348 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Msh3P13705 Psmg4-202ENSMUST00000147632 555 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Msh3P13705 Erh-201ENSMUST00000021559 1293 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Retrieved 100 of 76,532 protein–RNA pairs in 19.8 ms