Protein–RNA interactions for Protein: O88623

Usp2, Ubiquitin carboxyl-terminal hydrolase 2, mousemouse

Predictions only

Length 613 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp2O88623 Msx1-201ENSMUST00000063116 1935 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Usp2O88623 Slc12a8-204ENSMUST00000121925 2656 ntAPPRIS P2 TSL 5 BASIC20.08■□□□□ 0.81
Usp2O88623 Grin2d-203ENSMUST00000211713 5244 ntAPPRIS P1 TSL 5 BASIC20.08■□□□□ 0.81
Usp2O88623 Emc6-202ENSMUST00000108480 563 ntAPPRIS P1 TSL 2 BASIC20.08■□□□□ 0.81
Usp2O88623 4930444P10Rik-203ENSMUST00000151004 1001 ntAPPRIS P2 TSL 3 BASIC20.08■□□□□ 0.81
Usp2O88623 Olfm1-204ENSMUST00000113920 2513 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
Usp2O88623 Ttc9b-201ENSMUST00000008088 2052 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Usp2O88623 Tmem230-206ENSMUST00000180286 1531 ntAPPRIS P1 TSL 2 BASIC20.07■□□□□ 0.8
Usp2O88623 Hoxa5-201ENSMUST00000048794 1877 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Usp2O88623 Etv4-202ENSMUST00000107176 2377 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Usp2O88623 Etv4-201ENSMUST00000017868 2395 ntAPPRIS ALT1 TSL 5 BASIC20.07■□□□□ 0.8
Usp2O88623 Tead1-204ENSMUST00000106638 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Usp2O88623 Adgrb1-201ENSMUST00000042035 6228 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Usp2O88623 Rfc5-202ENSMUST00000111953 772 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Usp2O88623 Gpx1-202ENSMUST00000191997 787 ntTSL 2 BASIC20.07■□□□□ 0.8
Usp2O88623 Gm45168-202ENSMUST00000206461 1069 ntTSL 5 BASIC20.07■□□□□ 0.8
Usp2O88623 Dtymk-201ENSMUST00000027503 1003 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Usp2O88623 Rras-201ENSMUST00000044111 995 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Usp2O88623 Gpx1-201ENSMUST00000082429 1072 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Usp2O88623 Ypel1-202ENSMUST00000090199 631 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Usp2O88623 Stau2-217ENSMUST00000162751 3030 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Usp2O88623 Mcub-201ENSMUST00000029624 1318 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Usp2O88623 Kcnn2-203ENSMUST00000169783 1625 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Usp2O88623 Gm43006-201ENSMUST00000197702 1602 ntBASIC20.06■□□□□ 0.8
Usp2O88623 Slc9a2-203ENSMUST00000192345 2507 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Usp2O88623 Crnde-206ENSMUST00000179421 773 ntTSL 3 BASIC20.06■□□□□ 0.8
Usp2O88623 D11Wsu47e-201ENSMUST00000042227 2196 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Usp2O88623 Hfe2-201ENSMUST00000049208 2028 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Usp2O88623 Fabp3-201ENSMUST00000070532 823 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Usp2O88623 Rpl13-201ENSMUST00000000756 780 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Usp2O88623 Best2-201ENSMUST00000059072 1971 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Usp2O88623 Gm10571-201ENSMUST00000097869 1638 ntBASIC20.05■□□□□ 0.8
Usp2O88623 Myo1b-202ENSMUST00000046390 5052 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Usp2O88623 Grtp1-207ENSMUST00000211128 1416 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Usp2O88623 Mum1-201ENSMUST00000020365 2640 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Usp2O88623 Gm26571-201ENSMUST00000181399 666 ntBASIC20.05■□□□□ 0.8
Usp2O88623 AC099934.2-201ENSMUST00000196389 70 ntBASIC20.05■□□□□ 0.8
Usp2O88623 AC156953.1-201ENSMUST00000196953 70 ntBASIC20.05■□□□□ 0.8
Usp2O88623 AC157822.2-201ENSMUST00000200291 70 ntBASIC20.05■□□□□ 0.8
Usp2O88623 H2-Ke6-201ENSMUST00000045467 965 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Usp2O88623 Tmem147-201ENSMUST00000006478 870 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Usp2O88623 Pdcd2-205ENSMUST00000154293 1924 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Usp2O88623 Jkamp-202ENSMUST00000117449 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
Usp2O88623 Gm43909-201ENSMUST00000203443 1876 ntBASIC20.05■□□□□ 0.8
Usp2O88623 Lsr-203ENSMUST00000108116 2071 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
Usp2O88623 Suz12-206ENSMUST00000163272 4303 ntAPPRIS ALT2 TSL 5 BASIC20.04■□□□□ 0.8
Usp2O88623 Pianp-204ENSMUST00000160704 1116 ntAPPRIS P2 TSL 1 (best) BASIC20.04■□□□□ 0.8
Usp2O88623 Gas5-217ENSMUST00000161005 430 ntTSL 5 BASIC20.04■□□□□ 0.8
Usp2O88623 Slc35f3-201ENSMUST00000108759 2309 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Usp2O88623 Ptger3-202ENSMUST00000173533 2097 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
Usp2O88623 Derl2-207ENSMUST00000171041 1466 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Usp2O88623 Gp1bb-202ENSMUST00000167388 1847 ntAPPRIS ALT2 TSL 2 BASIC20.04■□□□□ 0.8
Usp2O88623 Chadl-201ENSMUST00000072910 2548 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
Usp2O88623 Cox18-202ENSMUST00000118816 1307 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
Usp2O88623 Zfp692-202ENSMUST00000153510 1887 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
Usp2O88623 Memo1-201ENSMUST00000078459 1513 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Usp2O88623 Sox17-208ENSMUST00000195555 1977 ntTSL 5 BASIC20.03■□□□□ 0.8
Usp2O88623 Ccdc84-201ENSMUST00000053286 1725 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Usp2O88623 Gm13067-201ENSMUST00000134236 404 ntTSL 5 BASIC20.03■□□□□ 0.8
Usp2O88623 Stum-202ENSMUST00000179826 601 ntAPPRIS ALT1 TSL 5 BASIC20.03■□□□□ 0.8
Usp2O88623 Tmbim4-201ENSMUST00000020446 904 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Usp2O88623 Lmo1-202ENSMUST00000207178 912 ntAPPRIS ALT1 TSL 2 BASIC20.03■□□□□ 0.8
Usp2O88623 Emc9-201ENSMUST00000022828 855 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Usp2O88623 Selenoo-201ENSMUST00000082439 2383 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Usp2O88623 2700081O15Rik-202ENSMUST00000159348 4989 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
Usp2O88623 Nfkbid-203ENSMUST00000108176 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
Usp2O88623 Msl3l2-201ENSMUST00000063138 2140 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Usp2O88623 Hes3-202ENSMUST00000218045 962 ntAPPRIS ALT2 TSL 5 BASIC20.02■□□□□ 0.8
Usp2O88623 Cnih2-201ENSMUST00000025805 1237 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Usp2O88623 Raver2-202ENSMUST00000106955 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
Usp2O88623 Ccng2-201ENSMUST00000031331 2810 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
Usp2O88623 Triobp-202ENSMUST00000109688 2553 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
Usp2O88623 Fbxw2-203ENSMUST00000113075 2260 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Usp2O88623 Gm4969-202ENSMUST00000141380 1892 ntAPPRIS P1 TSL 5 BASIC20.01■□□□□ 0.79
Usp2O88623 Prcd-201ENSMUST00000106381 724 ntTSL 3 BASIC20.01■□□□□ 0.79
Usp2O88623 Wnt16-203ENSMUST00000148639 1168 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Usp2O88623 Igfbp6-201ENSMUST00000023807 1112 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Usp2O88623 Grifin-201ENSMUST00000042993 613 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Usp2O88623 Gabbr2-201ENSMUST00000107749 5750 ntAPPRIS P1 TSL 2 BASIC20.01■□□□□ 0.79
Usp2O88623 Gm42911-201ENSMUST00000199360 1630 ntBASIC20.01■□□□□ 0.79
Usp2O88623 Nat14-201ENSMUST00000047309 1612 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Usp2O88623 Zcchc14-201ENSMUST00000046386 7444 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Usp2O88623 Gdf15-202ENSMUST00000110103 1380 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Usp2O88623 Zdhhc4-201ENSMUST00000001900 1364 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Usp2O88623 Pdpk1-205ENSMUST00000115411 1724 ntTSL 1 (best) BASIC20■□□□□ 0.79
Usp2O88623 Vegfa-207ENSMUST00000142351 1973 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
Usp2O88623 Klhl15-205ENSMUST00000113916 2363 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Usp2O88623 Magi2-205ENSMUST00000197354 4785 ntAPPRIS ALT2 TSL 5 BASIC20■□□□□ 0.79
Usp2O88623 Prrt1-201ENSMUST00000015620 1940 ntAPPRIS P1 TSL 5 BASIC20■□□□□ 0.79
Usp2O88623 Dnajb11-201ENSMUST00000004574 1927 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Usp2O88623 Lrp3-202ENSMUST00000122409 4147 ntTSL 1 (best) BASIC20■□□□□ 0.79
Usp2O88623 Pbx1-202ENSMUST00000072863 1709 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Usp2O88623 Kcnn4-201ENSMUST00000171904 1990 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Usp2O88623 Shisa4-201ENSMUST00000041240 1763 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Usp2O88623 Wdr4-203ENSMUST00000167419 813 ntTSL 3 BASIC19.99■□□□□ 0.79
Usp2O88623 AA386476-201ENSMUST00000098781 1665 ntBASIC19.99■□□□□ 0.79
Usp2O88623 Kremen2-201ENSMUST00000046525 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Usp2O88623 Gjc2-202ENSMUST00000108793 2187 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Usp2O88623 0610038B21Rik-202ENSMUST00000184762 1524 ntBASIC19.98■□□□□ 0.79
Usp2O88623 1700123O20Rik-201ENSMUST00000038539 1843 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Retrieved 100 of 76,532 protein–RNA pairs in 56.8 ms