Protein–RNA interactions for Protein: A6H5X4

Phf11, PHD finger protein 11, mousemouse

Predictions only

Length 337 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Phf11A6H5X4 Plppr3-201ENSMUST00000092325 2766 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
Phf11A6H5X4 Rhoa-201ENSMUST00000007959 2197 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Phf11A6H5X4 Pias2-202ENSMUST00000114777 4968 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Phf11A6H5X4 Gnb2-201ENSMUST00000031726 1860 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Phf11A6H5X4 Gnas-205ENSMUST00000109083 730 ntTSL 2 BASIC19.42■□□□□ 0.7
Phf11A6H5X4 Gp1bb-201ENSMUST00000051160 645 ntAPPRIS P3 BASIC19.42■□□□□ 0.7
Phf11A6H5X4 Gm3448-202ENSMUST00000097400 747 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
Phf11A6H5X4 Htra2-203ENSMUST00000113963 1629 ntTSL 5 BASIC19.42■□□□□ 0.7
Phf11A6H5X4 Gm9725-202ENSMUST00000166229 2326 ntTSL 5 BASIC19.42■□□□□ 0.7
Phf11A6H5X4 Trim3-203ENSMUST00000106791 2466 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Phf11A6H5X4 Lig3-204ENSMUST00000131537 1782 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Phf11A6H5X4 Lig3-209ENSMUST00000173009 1785 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Phf11A6H5X4 Zbed3-201ENSMUST00000045909 1894 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Phf11A6H5X4 Acot3-203ENSMUST00000223080 1545 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Phf11A6H5X4 Neurl4-213ENSMUST00000177476 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Phf11A6H5X4 Gga2-201ENSMUST00000033160 4915 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Phf11A6H5X4 Gm10941-201ENSMUST00000105408 708 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Phf11A6H5X4 Tmem9-202ENSMUST00000117950 847 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
Phf11A6H5X4 Ly6h-206ENSMUST00000156032 752 ntAPPRIS P3 TSL 3 BASIC19.41■□□□□ 0.7
Phf11A6H5X4 Slc39a7-203ENSMUST00000169397 2107 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
Phf11A6H5X4 Ly6h-201ENSMUST00000023241 906 ntAPPRIS ALT1 TSL 2 BASIC19.41■□□□□ 0.7
Phf11A6H5X4 Ikzf1-202ENSMUST00000048122 911 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Phf11A6H5X4 Lpcat2-205ENSMUST00000210099 2179 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Phf11A6H5X4 Ccdc50-201ENSMUST00000039443 2192 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Phf11A6H5X4 Ak2-202ENSMUST00000102604 1781 ntAPPRIS ALT1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Phf11A6H5X4 Donson-203ENSMUST00000117159 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Phf11A6H5X4 Ppm1b-201ENSMUST00000080217 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Phf11A6H5X4 Aplf-201ENSMUST00000032130 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Phf11A6H5X4 Dbf4-201ENSMUST00000002368 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Phf11A6H5X4 Ddost-201ENSMUST00000030538 2120 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Phf11A6H5X4 Lpcat3-201ENSMUST00000004381 2281 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Phf11A6H5X4 Upf1-201ENSMUST00000075666 4618 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Phf11A6H5X4 Ankrd40-203ENSMUST00000107818 3487 ntAPPRIS P3 TSL 5 BASIC19.4■□□□□ 0.7
Phf11A6H5X4 St3gal3-201ENSMUST00000030263 2549 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Phf11A6H5X4 Prr3-204ENSMUST00000172900 439 ntTSL 2 BASIC19.4■□□□□ 0.7
Phf11A6H5X4 Tor2a-208ENSMUST00000177382 396 ntTSL 5 BASIC19.4■□□□□ 0.7
Phf11A6H5X4 Mir7075-201ENSMUST00000184187 82 ntBASIC19.4■□□□□ 0.7
Phf11A6H5X4 Matn4-203ENSMUST00000109358 2056 ntTSL 5 BASIC19.4■□□□□ 0.7
Phf11A6H5X4 Unc5b-201ENSMUST00000077925 5869 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Phf11A6H5X4 Mfsd4a-202ENSMUST00000112365 1536 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
Phf11A6H5X4 Srsf1-201ENSMUST00000079866 2948 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
Phf11A6H5X4 Rfx8-202ENSMUST00000151913 2008 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Phf11A6H5X4 Hck-202ENSMUST00000109799 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Phf11A6H5X4 Pick1-204ENSMUST00000163571 2054 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
Phf11A6H5X4 Hck-203ENSMUST00000189688 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Phf11A6H5X4 Hck-201ENSMUST00000003370 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Phf11A6H5X4 L3mbtl4-201ENSMUST00000093007 2445 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
Phf11A6H5X4 Cd83-201ENSMUST00000015540 2477 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Phf11A6H5X4 AC158777.2-201ENSMUST00000228787 398 ntAPPRIS P1 BASIC19.39■□□□□ 0.69
Phf11A6H5X4 Coq10a-201ENSMUST00000043211 1421 ntAPPRIS P2 TSL 5 BASIC19.39■□□□□ 0.69
Phf11A6H5X4 Klhl15-205ENSMUST00000113916 2363 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Phf11A6H5X4 Surf4-201ENSMUST00000015011 3281 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Phf11A6H5X4 Magi2-206ENSMUST00000197443 6578 ntAPPRIS ALT2 TSL 5 BASIC19.38■□□□□ 0.69
Phf11A6H5X4 Setd4-202ENSMUST00000113951 1826 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
Phf11A6H5X4 Taf3-203ENSMUST00000114907 695 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Phf11A6H5X4 Pkig-204ENSMUST00000126182 762 ntAPPRIS P1 TSL 2 BASIC19.38■□□□□ 0.69
Phf11A6H5X4 Hotairm1-201ENSMUST00000129546 409 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Phf11A6H5X4 AA543186-201ENSMUST00000180841 1696 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Phf11A6H5X4 Tomm40-201ENSMUST00000032555 1646 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Phf11A6H5X4 Gmds-201ENSMUST00000041859 1713 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Phf11A6H5X4 Kndc1-202ENSMUST00000121839 2210 ntTSL 2 BASIC19.37■□□□□ 0.69
Phf11A6H5X4 Meg3-207ENSMUST00000143836 1896 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Phf11A6H5X4 Pou2f2-210ENSMUST00000176408 1697 ntTSL 5 BASIC19.37■□□□□ 0.69
Phf11A6H5X4 Rapgefl1-202ENSMUST00000107479 4855 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
Phf11A6H5X4 B630019K06Rik-201ENSMUST00000064196 2583 ntAPPRIS P1 BASIC19.37■□□□□ 0.69
Phf11A6H5X4 Fam168b-208ENSMUST00000191307 844 ntTSL 2 BASIC19.37■□□□□ 0.69
Phf11A6H5X4 Crhr1-201ENSMUST00000093925 2460 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Phf11A6H5X4 Tmem79-202ENSMUST00000107552 2063 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
Phf11A6H5X4 Zbed3-202ENSMUST00000221807 1945 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Phf11A6H5X4 Dvl3-203ENSMUST00000171572 2493 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Phf11A6H5X4 Trmt61a-201ENSMUST00000084947 2433 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Phf11A6H5X4 Gm26646-201ENSMUST00000180715 1490 ntTSL 5 BASIC19.36■□□□□ 0.69
Phf11A6H5X4 Tnks2-201ENSMUST00000025729 6481 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
Phf11A6H5X4 Stk35-201ENSMUST00000165413 2882 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Phf11A6H5X4 Tead2-201ENSMUST00000033060 2140 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
Phf11A6H5X4 Snrpa-201ENSMUST00000080356 1365 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Phf11A6H5X4 Tbc1d25-201ENSMUST00000039892 2648 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
Phf11A6H5X4 D630036H23Rik-201ENSMUST00000171007 940 ntAPPRIS P1 BASIC19.36■□□□□ 0.69
Phf11A6H5X4 Mir6236-201ENSMUST00000184437 123 ntBASIC19.36■□□□□ 0.69
Phf11A6H5X4 Bag1-204ENSMUST00000215842 1068 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
Phf11A6H5X4 Gm6139-201ENSMUST00000079261 882 ntBASIC19.36■□□□□ 0.69
Phf11A6H5X4 Smc6-201ENSMUST00000020931 5603 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Phf11A6H5X4 Rab5a-201ENSMUST00000017975 2357 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Phf11A6H5X4 Gdf11-201ENSMUST00000026408 4062 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Phf11A6H5X4 Syt6-205ENSMUST00000121834 1710 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Phf11A6H5X4 Socs2-214ENSMUST00000172070 2153 ntAPPRIS P1 TSL 2 BASIC19.36■□□□□ 0.69
Phf11A6H5X4 Dbnl-201ENSMUST00000020769 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Phf11A6H5X4 Tusc3-203ENSMUST00000209440 1535 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Phf11A6H5X4 Bfsp1-201ENSMUST00000028907 2372 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
Phf11A6H5X4 Vgf-202ENSMUST00000186451 2277 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
Phf11A6H5X4 Pi16-201ENSMUST00000114699 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Phf11A6H5X4 Prodh-206ENSMUST00000139861 677 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Phf11A6H5X4 Cdv3-ps-201ENSMUST00000169632 827 ntBASIC19.35■□□□□ 0.69
Phf11A6H5X4 Pet117-201ENSMUST00000183618 693 ntAPPRIS P1 TSL 2 BASIC19.35■□□□□ 0.69
Phf11A6H5X4 Fbxo2-201ENSMUST00000047951 1288 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Phf11A6H5X4 Pycr2-201ENSMUST00000027802 1580 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Phf11A6H5X4 Atp10a-201ENSMUST00000168747 5419 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Phf11A6H5X4 Evi5l-209ENSMUST00000177053 1542 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
Phf11A6H5X4 Pknox1-203ENSMUST00000175806 2272 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Phf11A6H5X4 Cog1-202ENSMUST00000063776 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Retrieved 100 of 76,532 protein–RNA pairs in 33.3 ms