Protein–RNA interactions for Protein: A0A075B6B0

Trav6d-7, T cell receptor alpha variable 6D-7 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6d-7A0A075B6B0 Gabbr1-201ENSMUST00000025338 5248 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trav6d-7A0A075B6B0 Mgat4b-201ENSMUST00000041725 2429 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trav6d-7A0A075B6B0 Dusp15-202ENSMUST00000109811 753 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Trav6d-7A0A075B6B0 Mapkapk3-208ENSMUST00000192054 944 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Trav6d-7A0A075B6B0 AC140930.3-201ENSMUST00000222935 274 ntBASIC15.11■□□□□ 0.01
Trav6d-7A0A075B6B0 Matn4-203ENSMUST00000109358 2056 ntTSL 5 BASIC15.11■□□□□ 0.01
Trav6d-7A0A075B6B0 Chml-203ENSMUST00000210367 1324 ntTSL 5 BASIC15.11■□□□□ 0.01
Trav6d-7A0A075B6B0 Anapc5-208ENSMUST00000197719 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trav6d-7A0A075B6B0 Adcy3-202ENSMUST00000124505 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trav6d-7A0A075B6B0 Mafg-201ENSMUST00000058162 4923 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trav6d-7A0A075B6B0 Hr-203ENSMUST00000161069 5607 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trav6d-7A0A075B6B0 Rhoa-201ENSMUST00000007959 2197 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trav6d-7A0A075B6B0 Ankrd17-214ENSMUST00000218526 4938 ntTSL 5 BASIC15.1■□□□□ 0.01
Trav6d-7A0A075B6B0 Map2k2-207ENSMUST00000143517 2405 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trav6d-7A0A075B6B0 Spr-203ENSMUST00000174769 1029 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Trav6d-7A0A075B6B0 Kmt5b-201ENSMUST00000005518 1283 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
Trav6d-7A0A075B6B0 Dgcr6-201ENSMUST00000066027 1050 ntAPPRIS P4 TSL 2 BASIC15.1■□□□□ 0.01
Trav6d-7A0A075B6B0 Patz1-203ENSMUST00000094471 2930 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Trav6d-7A0A075B6B0 Ntn5-202ENSMUST00000182750 1758 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trav6d-7A0A075B6B0 Rhod-201ENSMUST00000048197 1344 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trav6d-7A0A075B6B0 Hpdl-201ENSMUST00000055436 1804 ntAPPRIS P1 BASIC15.1■□□□□ 0.01
Trav6d-7A0A075B6B0 Dact2-201ENSMUST00000053218 2808 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trav6d-7A0A075B6B0 Rem2-202ENSMUST00000164766 1884 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trav6d-7A0A075B6B0 Nova2-202ENSMUST00000220302 8372 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
Trav6d-7A0A075B6B0 Nova2-201ENSMUST00000032571 8372 ntTSL 5 BASIC15.1■□□□□ 0.01
Trav6d-7A0A075B6B0 B130046B21Rik-201ENSMUST00000181510 2216 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Trav6d-7A0A075B6B0 Traf3-203ENSMUST00000117269 6972 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Trav6d-7A0A075B6B0 Atrn-201ENSMUST00000028781 8745 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trav6d-7A0A075B6B0 Dtnb-225ENSMUST00000174663 2381 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
Trav6d-7A0A075B6B0 Rela-201ENSMUST00000025867 2716 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trav6d-7A0A075B6B0 Samd10-201ENSMUST00000060173 2164 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trav6d-7A0A075B6B0 Snx5-202ENSMUST00000110030 2512 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trav6d-7A0A075B6B0 Gnas-206ENSMUST00000109084 1695 ntAPPRIS ALT1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trav6d-7A0A075B6B0 Brpf3-201ENSMUST00000004985 5766 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trav6d-7A0A075B6B0 Zcchc24-201ENSMUST00000069180 4556 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trav6d-7A0A075B6B0 Nphp3-201ENSMUST00000035167 5899 ntAPPRIS P2 TSL 1 (best) BASIC15.08■□□□□ 0.01
Trav6d-7A0A075B6B0 Pou2f2-206ENSMUST00000108418 1934 ntTSL 1 (best) BASIC15.08■□□□□ 0
Trav6d-7A0A075B6B0 Lmbr1l-201ENSMUST00000023736 2300 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Trav6d-7A0A075B6B0 Cep170b-202ENSMUST00000101018 6641 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Trav6d-7A0A075B6B0 Ssbp1-203ENSMUST00000117411 933 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Trav6d-7A0A075B6B0 Gm12821-201ENSMUST00000120022 600 ntBASIC15.08■□□□□ 0
Trav6d-7A0A075B6B0 Ramp1-202ENSMUST00000165855 852 ntTSL 2 BASIC15.08■□□□□ 0
Trav6d-7A0A075B6B0 D630002J18Rik-201ENSMUST00000181854 1115 ntBASIC15.08■□□□□ 0
Trav6d-7A0A075B6B0 Rexo2-208ENSMUST00000216470 454 ntTSL 3 BASIC15.08■□□□□ 0
Trav6d-7A0A075B6B0 Sdsl-202ENSMUST00000052258 1225 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Trav6d-7A0A075B6B0 Ahcyl1-201ENSMUST00000029490 3863 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Trav6d-7A0A075B6B0 Wnk2-210ENSMUST00000162403 6147 ntAPPRIS ALT2 TSL 5 BASIC15.08■□□□□ 0
Trav6d-7A0A075B6B0 Mblac1-201ENSMUST00000057773 1308 ntAPPRIS P1 BASIC15.08■□□□□ 0
Trav6d-7A0A075B6B0 Srm-201ENSMUST00000006611 1338 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Trav6d-7A0A075B6B0 Ints6-201ENSMUST00000053959 4993 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Trav6d-7A0A075B6B0 Srxn1-201ENSMUST00000041500 2812 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Trav6d-7A0A075B6B0 Tmem230-206ENSMUST00000180286 1531 ntAPPRIS P1 TSL 2 BASIC15.07■□□□□ 0
Trav6d-7A0A075B6B0 Cd83-201ENSMUST00000015540 2477 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Trav6d-7A0A075B6B0 Ahsa2-201ENSMUST00000020529 3023 ntAPPRIS P3 TSL 1 (best) BASIC15.07■□□□□ 0
Trav6d-7A0A075B6B0 Mfsd6-205ENSMUST00000156876 4932 ntAPPRIS P4 TSL 5 BASIC15.07■□□□□ 0
Trav6d-7A0A075B6B0 Bex4-201ENSMUST00000116527 837 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Trav6d-7A0A075B6B0 Sumf1-206ENSMUST00000172188 723 ntTSL 5 BASIC15.07■□□□□ 0
Trav6d-7A0A075B6B0 Pigx-211ENSMUST00000189013 982 ntAPPRIS ALT2 TSL 2 BASIC15.07■□□□□ 0
Trav6d-7A0A075B6B0 Appbp2os-202ENSMUST00000206972 447 ntBASIC15.07■□□□□ 0
Trav6d-7A0A075B6B0 Golgb1-201ENSMUST00000023534 498 ntBASIC15.07■□□□□ 0
Trav6d-7A0A075B6B0 Pigx-201ENSMUST00000096109 993 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
Trav6d-7A0A075B6B0 AU022751-201ENSMUST00000101698 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
Trav6d-7A0A075B6B0 Lrrfip2-205ENSMUST00000196981 1839 ntAPPRIS ALT2 TSL 5 BASIC15.07■□□□□ 0
Trav6d-7A0A075B6B0 Ankrd40-203ENSMUST00000107818 3487 ntAPPRIS P3 TSL 5 BASIC15.07■□□□□ 0
Trav6d-7A0A075B6B0 Eif2b4-203ENSMUST00000166769 1878 ntTSL 5 BASIC15.07■□□□□ 0
Trav6d-7A0A075B6B0 Ehmt2-201ENSMUST00000013931 4026 ntAPPRIS P4 TSL 1 (best) BASIC15.07■□□□□ 0
Trav6d-7A0A075B6B0 Tmem191c-213ENSMUST00000164950 1394 ntAPPRIS P1 TSL 3 BASIC15.07■□□□□ 0
Trav6d-7A0A075B6B0 Bend7-204ENSMUST00000184139 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
Trav6d-7A0A075B6B0 Zbtb7a-203ENSMUST00000119606 1841 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Trav6d-7A0A075B6B0 C1qtnf4-201ENSMUST00000111466 1290 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Trav6d-7A0A075B6B0 1110065P20Rik-206ENSMUST00000185036 1223 ntTSL 2 BASIC15.06■□□□□ 0
Trav6d-7A0A075B6B0 4930439D14Rik-201ENSMUST00000186765 359 ntBASIC15.06■□□□□ 0
Trav6d-7A0A075B6B0 Zfp36l1-204ENSMUST00000219642 545 ntTSL 3 BASIC15.06■□□□□ 0
Trav6d-7A0A075B6B0 Htra2-202ENSMUST00000113962 1305 ntTSL 5 BASIC15.06■□□□□ 0
Trav6d-7A0A075B6B0 Gng12-202ENSMUST00000114222 1354 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Trav6d-7A0A075B6B0 B430218F22Rik-201ENSMUST00000181168 1495 ntAPPRIS P1 BASIC15.06■□□□□ 0
Trav6d-7A0A075B6B0 Hcn2-201ENSMUST00000020581 3089 ntAPPRIS P1 TSL 5 BASIC15.06■□□□□ 0
Trav6d-7A0A075B6B0 Ralgps2-205ENSMUST00000185198 2229 ntTSL 1 (best) BASIC15.05■□□□□ 0
Trav6d-7A0A075B6B0 Cep78-201ENSMUST00000047704 2548 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Trav6d-7A0A075B6B0 Dennd3-201ENSMUST00000043414 5299 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Trav6d-7A0A075B6B0 Oaz1-201ENSMUST00000060987 1071 ntAPPRIS ALT1 TSL 5 BASIC15.05■□□□□ -0
Trav6d-7A0A075B6B0 Rims1-209ENSMUST00000218140 1434 ntTSL 5 BASIC15.05■□□□□ -0
Trav6d-7A0A075B6B0 Smim19-201ENSMUST00000033935 1402 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Trav6d-7A0A075B6B0 Rem1-201ENSMUST00000000369 1663 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Trav6d-7A0A075B6B0 Ltbp4-205ENSMUST00000121175 5118 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ -0
Trav6d-7A0A075B6B0 Sorcs2-201ENSMUST00000037370 5707 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Trav6d-7A0A075B6B0 Klc3-201ENSMUST00000047170 1901 ntTSL 1 (best) BASIC15.05■□□□□ -0
Trav6d-7A0A075B6B0 Hoxc11-201ENSMUST00000001701 2021 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Trav6d-7A0A075B6B0 Nkx2-3-201ENSMUST00000057178 2112 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Trav6d-7A0A075B6B0 Cd37-204ENSMUST00000209779 2541 ntTSL 1 (best) BASIC15.05■□□□□ -0
Trav6d-7A0A075B6B0 Sybu-208ENSMUST00000228057 3026 ntAPPRIS ALT2 BASIC15.05■□□□□ -0
Trav6d-7A0A075B6B0 Prkar1b-201ENSMUST00000026973 2637 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Trav6d-7A0A075B6B0 Klc1-204ENSMUST00000122300 2268 ntTSL 1 (best) BASIC15.04■□□□□ -0
Trav6d-7A0A075B6B0 Actrt3-201ENSMUST00000047630 1961 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Trav6d-7A0A075B6B0 Gm43909-201ENSMUST00000203443 1876 ntBASIC15.04■□□□□ -0
Trav6d-7A0A075B6B0 Abhd13-202ENSMUST00000139793 5191 ntAPPRIS P1 TSL 2 BASIC15.04■□□□□ -0
Trav6d-7A0A075B6B0 Tmem121b-201ENSMUST00000178687 4869 ntAPPRIS P1 BASIC15.04■□□□□ -0
Trav6d-7A0A075B6B0 Lefty1-201ENSMUST00000037361 1620 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Trav6d-7A0A075B6B0 Ost4-202ENSMUST00000132253 1144 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Trav6d-7A0A075B6B0 Kcnk15-201ENSMUST00000044798 1199 ntAPPRIS P2 TSL 1 (best) BASIC15.04■□□□□ -0
Retrieved 100 of 76,532 protein–RNA pairs in 40.2 ms