Protein–RNA interactions for Protein: A0A075B633

Trav8n-2, T cell receptor alpha variable 8n-2 (Fragment), mousemouse

Predictions only

Length 112 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav8n-2A0A075B633 Hdhd2-206ENSMUST00000145634 1585 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
Trav8n-2A0A075B633 N4bp1-201ENSMUST00000034074 6469 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Trav8n-2A0A075B633 Tfam-203ENSMUST00000121685 899 ntAPPRIS ALT2 TSL 2 BASIC18.05■□□□□ 0.48
Trav8n-2A0A075B633 Zfp629-207ENSMUST00000134446 670 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Trav8n-2A0A075B633 Foxk1-202ENSMUST00000198422 687 ntTSL 3 BASIC18.05■□□□□ 0.48
Trav8n-2A0A075B633 Snrpc-201ENSMUST00000071006 870 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Trav8n-2A0A075B633 Hexdc-201ENSMUST00000038831 2378 ntAPPRIS ALT2 TSL 5 BASIC18.05■□□□□ 0.48
Trav8n-2A0A075B633 Aplf-201ENSMUST00000032130 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Trav8n-2A0A075B633 B3galnt1-201ENSMUST00000061826 2028 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Trav8n-2A0A075B633 Klhl25-203ENSMUST00000205612 1343 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Trav8n-2A0A075B633 Hoxb6-201ENSMUST00000000704 1321 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Trav8n-2A0A075B633 Dao-201ENSMUST00000086599 1525 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Trav8n-2A0A075B633 Clta-202ENSMUST00000107846 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
Trav8n-2A0A075B633 Pdgfb-201ENSMUST00000000500 2918 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Trav8n-2A0A075B633 Fdx1l-201ENSMUST00000010348 812 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Trav8n-2A0A075B633 Clta-201ENSMUST00000107845 1031 ntAPPRIS ALT2 TSL 2 BASIC18.04■□□□□ 0.48
Trav8n-2A0A075B633 Snx12-204ENSMUST00000156473 1114 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Trav8n-2A0A075B633 Boll-203ENSMUST00000159398 658 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
Trav8n-2A0A075B633 Tecr-203ENSMUST00000165740 1120 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Trav8n-2A0A075B633 Cdan1-202ENSMUST00000110701 6384 ntAPPRIS P2 TSL 5 BASIC18.04■□□□□ 0.48
Trav8n-2A0A075B633 Pi4kb-207ENSMUST00000167008 1962 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Trav8n-2A0A075B633 Fah-201ENSMUST00000032865 1585 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Trav8n-2A0A075B633 Spint1-202ENSMUST00000110816 1913 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
Trav8n-2A0A075B633 Mau2-206ENSMUST00000212451 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
Trav8n-2A0A075B633 C230096K16Rik-201ENSMUST00000198074 1722 ntBASIC18.03■□□□□ 0.48
Trav8n-2A0A075B633 Sh3gl1-201ENSMUST00000003268 2072 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Trav8n-2A0A075B633 Ppt2-204ENSMUST00000168391 1342 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
Trav8n-2A0A075B633 Dkk4-201ENSMUST00000033936 1315 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Trav8n-2A0A075B633 Rapgef1-201ENSMUST00000091146 6212 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Trav8n-2A0A075B633 Derl2-207ENSMUST00000171041 1466 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Trav8n-2A0A075B633 Nkx2-2-201ENSMUST00000067075 2120 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Trav8n-2A0A075B633 Lsm12-201ENSMUST00000021297 2256 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Trav8n-2A0A075B633 Ankrd54-201ENSMUST00000040676 1904 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Trav8n-2A0A075B633 Irak1-202ENSMUST00000068286 2537 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
Trav8n-2A0A075B633 Il23a-201ENSMUST00000026449 1360 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Trav8n-2A0A075B633 Shq1-201ENSMUST00000089245 1638 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Trav8n-2A0A075B633 Gm7290-201ENSMUST00000104990 617 ntBASIC18.02■□□□□ 0.48
Trav8n-2A0A075B633 Gm12918-201ENSMUST00000120234 636 ntBASIC18.02■□□□□ 0.48
Trav8n-2A0A075B633 Gm15710-201ENSMUST00000121821 636 ntBASIC18.02■□□□□ 0.48
Trav8n-2A0A075B633 Cacna2d1-207ENSMUST00000196750 1272 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Trav8n-2A0A075B633 Gm5075-201ENSMUST00000196916 622 ntBASIC18.02■□□□□ 0.48
Trav8n-2A0A075B633 Rabac1-203ENSMUST00000205871 986 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Trav8n-2A0A075B633 Gm4968-201ENSMUST00000071458 858 ntBASIC18.02■□□□□ 0.48
Trav8n-2A0A075B633 Rpl13-ps6-201ENSMUST00000079761 636 ntBASIC18.02■□□□□ 0.48
Trav8n-2A0A075B633 Rpl13-ps3-201ENSMUST00000079960 624 ntBASIC18.02■□□□□ 0.48
Trav8n-2A0A075B633 Ccdc61-201ENSMUST00000098780 2022 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Trav8n-2A0A075B633 Pcmtd1-201ENSMUST00000061280 5232 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Trav8n-2A0A075B633 Ube2e3-201ENSMUST00000028398 2249 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Trav8n-2A0A075B633 Fezf2-201ENSMUST00000022262 2188 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Trav8n-2A0A075B633 St6galnac6-205ENSMUST00000113290 2402 ntAPPRIS ALT1 TSL 5 BASIC18.01■□□□□ 0.47
Trav8n-2A0A075B633 Slc35a3-201ENSMUST00000029569 5725 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Trav8n-2A0A075B633 Gm20760-201ENSMUST00000179197 648 ntBASIC18.01■□□□□ 0.47
Trav8n-2A0A075B633 1700028I16Rik-201ENSMUST00000076984 1048 ntTSL 5 BASIC18.01■□□□□ 0.47
Trav8n-2A0A075B633 Rab43-203ENSMUST00000078647 4605 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Trav8n-2A0A075B633 Arl4d-201ENSMUST00000039388 1382 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Trav8n-2A0A075B633 Jmjd7-201ENSMUST00000044675 1373 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Trav8n-2A0A075B633 Kcnk1-201ENSMUST00000046765 2235 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Trav8n-2A0A075B633 Mgll-205ENSMUST00000150180 1312 ntTSL 1 (best) BASIC18■□□□□ 0.47
Trav8n-2A0A075B633 Hoxa11os-201ENSMUST00000134512 1839 ntTSL 1 (best) BASIC18■□□□□ 0.47
Trav8n-2A0A075B633 Impa2-201ENSMUST00000025403 1661 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Trav8n-2A0A075B633 Stxbp3-202ENSMUST00000106596 553 ntTSL 2 BASIC18■□□□□ 0.47
Trav8n-2A0A075B633 Atraid-201ENSMUST00000013766 966 ntAPPRIS P2 TSL 1 (best) BASIC18■□□□□ 0.47
Trav8n-2A0A075B633 Map1lc3b-203ENSMUST00000181521 775 ntTSL 3 BASIC18■□□□□ 0.47
Trav8n-2A0A075B633 Vax2-201ENSMUST00000037807 1242 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Trav8n-2A0A075B633 Hikeshi-201ENSMUST00000075010 715 ntTSL 3 BASIC18■□□□□ 0.47
Trav8n-2A0A075B633 Hcn4-201ENSMUST00000034889 6118 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Trav8n-2A0A075B633 Pus1-203ENSMUST00000086643 1868 ntAPPRIS P4 TSL 1 (best) BASIC18■□□□□ 0.47
Trav8n-2A0A075B633 Nat14-201ENSMUST00000047309 1612 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Trav8n-2A0A075B633 Stk32c-201ENSMUST00000016125 2206 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Trav8n-2A0A075B633 Shisa5-202ENSMUST00000112059 1910 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
Trav8n-2A0A075B633 Grap-201ENSMUST00000004959 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Trav8n-2A0A075B633 Bspry-201ENSMUST00000030088 1757 ntAPPRIS P2 TSL 1 (best) BASIC17.99■□□□□ 0.47
Trav8n-2A0A075B633 H2-Q7-201ENSMUST00000071951 1406 ntAPPRIS P2 TSL 1 (best) BASIC17.99■□□□□ 0.47
Trav8n-2A0A075B633 Gm13146-201ENSMUST00000118508 780 ntBASIC17.99■□□□□ 0.47
Trav8n-2A0A075B633 Gm53-201ENSMUST00000129907 1172 ntTSL 2 BASIC17.99■□□□□ 0.47
Trav8n-2A0A075B633 Gm10653-202ENSMUST00000139570 835 ntBASIC17.99■□□□□ 0.47
Trav8n-2A0A075B633 D130020L05Rik-202ENSMUST00000220889 769 ntTSL 3 BASIC17.99■□□□□ 0.47
Trav8n-2A0A075B633 Gng5-201ENSMUST00000090031 593 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Trav8n-2A0A075B633 Tfg-201ENSMUST00000065515 1945 ntAPPRIS P2 TSL 1 (best) BASIC17.99■□□□□ 0.47
Trav8n-2A0A075B633 Psme4-201ENSMUST00000041231 6491 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Trav8n-2A0A075B633 Ung-201ENSMUST00000031587 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
Trav8n-2A0A075B633 Syap1-201ENSMUST00000033723 2087 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Trav8n-2A0A075B633 Eif1-201ENSMUST00000049385 1322 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Trav8n-2A0A075B633 1810010K12Rik-201ENSMUST00000070378 1324 ntBASIC17.98■□□□□ 0.47
Trav8n-2A0A075B633 Lgr4-202ENSMUST00000111037 4988 ntTSL 5 BASIC17.98■□□□□ 0.47
Trav8n-2A0A075B633 Fam193b-201ENSMUST00000021957 4341 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Trav8n-2A0A075B633 Rhou-201ENSMUST00000045487 3371 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Trav8n-2A0A075B633 Slc18a3-201ENSMUST00000191501 2413 ntAPPRIS P1 BASIC17.98■□□□□ 0.47
Trav8n-2A0A075B633 Ptbp3-204ENSMUST00000140925 606 ntTSL 3 BASIC17.98■□□□□ 0.47
Trav8n-2A0A075B633 Gm5408-201ENSMUST00000197998 747 ntBASIC17.98■□□□□ 0.47
Trav8n-2A0A075B633 1700123O20Rik-201ENSMUST00000038539 1843 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Trav8n-2A0A075B633 Stbd1-201ENSMUST00000050952 1985 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Trav8n-2A0A075B633 Cacnb1-202ENSMUST00000092736 1880 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Trav8n-2A0A075B633 Nkpd1-203ENSMUST00000214205 2309 ntAPPRIS ALT2 TSL 5 BASIC17.97■□□□□ 0.47
Trav8n-2A0A075B633 Ube2q1-201ENSMUST00000038356 3077 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Trav8n-2A0A075B633 Gssos2-201ENSMUST00000130859 727 ntTSL 3 BASIC17.97■□□□□ 0.47
Trav8n-2A0A075B633 Tnfaip8-208ENSMUST00000148989 1002 ntAPPRIS P1 TSL 2 BASIC17.97■□□□□ 0.47
Trav8n-2A0A075B633 Tpsg1-204ENSMUST00000160920 867 ntTSL 3 BASIC17.97■□□□□ 0.47
Trav8n-2A0A075B633 Nectin1-201ENSMUST00000034510 5653 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Trav8n-2A0A075B633 Rem2-202ENSMUST00000164766 1884 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Retrieved 100 of 76,532 protein–RNA pairs in 53.1 ms