Protein–RNA interactions for Protein: Q9JIY8

Cml3, Probable N-acetyltransferase CML3, mousemouse

Predictions only

Length 226 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cml3Q9JIY8 Usp2-202ENSMUST00000065461 2057 ntAPPRIS P2 TSL 1 (best) BASIC15.07■□□□□ 0
Cml3Q9JIY8 Nbea-201ENSMUST00000029374 10986 ntAPPRIS P1 TSL 5 BASIC15.07■□□□□ 0
Cml3Q9JIY8 Ptprf-201ENSMUST00000049074 7656 ntAPPRIS P1 TSL 5 BASIC15.06■□□□□ 0
Cml3Q9JIY8 Spry1-202ENSMUST00000108107 2773 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Cml3Q9JIY8 Mir6538-201ENSMUST00000183713 110 ntBASIC15.06■□□□□ 0
Cml3Q9JIY8 Lin7b-201ENSMUST00000003971 735 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Cml3Q9JIY8 Cgrrf1-201ENSMUST00000068532 1324 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Cml3Q9JIY8 Exoc3l2-201ENSMUST00000011407 2200 ntTSL 5 BASIC15.06■□□□□ 0
Cml3Q9JIY8 Aktip-202ENSMUST00000120213 2200 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Cml3Q9JIY8 Dedd-203ENSMUST00000111299 2322 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Cml3Q9JIY8 1700008J07Rik-201ENSMUST00000185351 2432 ntBASIC15.06■□□□□ 0
Cml3Q9JIY8 Usp48-201ENSMUST00000055131 5722 ntTSL 1 (best) BASIC15.06■□□□□ 0
Cml3Q9JIY8 Pacsin2-201ENSMUST00000056177 2795 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Cml3Q9JIY8 Letm1-201ENSMUST00000005431 5272 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Cml3Q9JIY8 Trim37-201ENSMUST00000041282 5632 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Cml3Q9JIY8 Tbc1d25-201ENSMUST00000039892 2648 ntAPPRIS P3 TSL 1 (best) BASIC15.05■□□□□ 0
Cml3Q9JIY8 Gapvd1-203ENSMUST00000113099 5758 ntAPPRIS ALT2 TSL 5 BASIC15.05■□□□□ -0
Cml3Q9JIY8 Eif4e2-204ENSMUST00000113231 1119 ntTSL 1 (best) BASIC15.05■□□□□ -0
Cml3Q9JIY8 Gm28040-202ENSMUST00000184603 890 ntAPPRIS P1 TSL 2 BASIC15.05■□□□□ -0
Cml3Q9JIY8 Gas1-202ENSMUST00000223933 1155 ntAPPRIS P2 BASIC15.05■□□□□ -0
Cml3Q9JIY8 Brsk2-201ENSMUST00000018971 4049 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ -0
Cml3Q9JIY8 Tmem55b-209ENSMUST00000162957 1465 ntTSL 1 (best) BASIC15.05■□□□□ -0
Cml3Q9JIY8 Rxra-201ENSMUST00000077257 4905 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Cml3Q9JIY8 Ssfa2-203ENSMUST00000111788 4976 ntAPPRIS ALT2 TSL 5 BASIC15.05■□□□□ -0
Cml3Q9JIY8 Junb-201ENSMUST00000064922 1809 ntAPPRIS P1 BASIC15.05■□□□□ -0
Cml3Q9JIY8 Wdr41-202ENSMUST00000159647 2289 ntTSL 5 BASIC15.05■□□□□ -0
Cml3Q9JIY8 Wdr41-206ENSMUST00000167155 2289 ntTSL 1 (best) BASIC15.05■□□□□ -0
Cml3Q9JIY8 Qrich1-206ENSMUST00000193258 2291 ntTSL 2 BASIC15.05■□□□□ -0
Cml3Q9JIY8 Cd83-201ENSMUST00000015540 2477 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Cml3Q9JIY8 Ero1l-201ENSMUST00000022378 4418 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Cml3Q9JIY8 Camk2d-228ENSMUST00000200171 5396 ntTSL 5 BASIC15.05■□□□□ -0
Cml3Q9JIY8 Lcorl-202ENSMUST00000045586 5708 ntTSL 1 (best) BASIC15.04■□□□□ -0
Cml3Q9JIY8 Pus1-203ENSMUST00000086643 1868 ntAPPRIS P4 TSL 1 (best) BASIC15.04■□□□□ -0
Cml3Q9JIY8 Ercc6l2-208ENSMUST00000144763 1820 ntTSL 1 (best) BASIC15.04■□□□□ -0
Cml3Q9JIY8 Rasl11b-201ENSMUST00000051937 1812 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Cml3Q9JIY8 Serbp1-207ENSMUST00000203436 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
Cml3Q9JIY8 Wipi1-203ENSMUST00000106689 1220 ntTSL 1 (best) BASIC15.04■□□□□ -0
Cml3Q9JIY8 Btbd6-206ENSMUST00000222209 644 ntTSL 3 BASIC15.04■□□□□ -0
Cml3Q9JIY8 Stx2-202ENSMUST00000100680 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
Cml3Q9JIY8 Picalm-206ENSMUST00000207484 8209 ntAPPRIS P3 TSL 1 (best) BASIC15.04■□□□□ -0
Cml3Q9JIY8 Gramd1a-202ENSMUST00000085636 2543 ntAPPRIS ALT2 TSL 5 BASIC15.04■□□□□ -0
Cml3Q9JIY8 Tjp1-202ENSMUST00000102592 7049 ntAPPRIS P3 TSL 1 (best) BASIC15.04■□□□□ -0
Cml3Q9JIY8 Ubp1-201ENSMUST00000009885 3742 ntAPPRIS ALT1 TSL 5 BASIC15.04■□□□□ -0
Cml3Q9JIY8 Cacnb1-203ENSMUST00000103144 2236 ntTSL 5 BASIC15.04■□□□□ -0
Cml3Q9JIY8 Mex3d-201ENSMUST00000105350 3266 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Cml3Q9JIY8 Tal1-204ENSMUST00000162489 2894 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Cml3Q9JIY8 Hrh3-201ENSMUST00000056480 2706 ntAPPRIS P2 TSL 1 (best) BASIC15.03■□□□□ -0
Cml3Q9JIY8 Utp11-201ENSMUST00000030738 1603 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Cml3Q9JIY8 Klf1-201ENSMUST00000067060 1530 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Cml3Q9JIY8 Slc9a7-201ENSMUST00000072451 2512 ntAPPRIS P2 TSL 1 (best) BASIC15.03■□□□□ -0
Cml3Q9JIY8 Dgcr6-209ENSMUST00000155387 1415 ntTSL 3 BASIC15.03■□□□□ -0
Cml3Q9JIY8 Btf3l4-203ENSMUST00000102741 1033 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Cml3Q9JIY8 Gm5067-201ENSMUST00000170449 1009 ntBASIC15.03■□□□□ -0
Cml3Q9JIY8 Vegfb-201ENSMUST00000025914 1281 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
Cml3Q9JIY8 Dact2-201ENSMUST00000053218 2808 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Cml3Q9JIY8 Actrt3-201ENSMUST00000047630 1961 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Cml3Q9JIY8 Farp1-201ENSMUST00000026635 4885 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
Cml3Q9JIY8 Fbxo4-201ENSMUST00000022791 1565 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Cml3Q9JIY8 Ube2k-204ENSMUST00000201292 1529 ntTSL 1 (best) BASIC15.02■□□□□ -0
Cml3Q9JIY8 Kansl1l-201ENSMUST00000068168 4459 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Cml3Q9JIY8 Tmem74b-202ENSMUST00000109872 1399 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Cml3Q9JIY8 Syt17-203ENSMUST00000203485 1932 ntTSL 1 (best) BASIC15.02■□□□□ -0
Cml3Q9JIY8 Prr7-201ENSMUST00000046533 1359 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Cml3Q9JIY8 Med16-204ENSMUST00000165684 2950 ntAPPRIS P3 TSL 1 (best) BASIC15.02■□□□□ -0
Cml3Q9JIY8 Arfrp1-203ENSMUST00000127988 2447 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Cml3Q9JIY8 Kcnip2-209ENSMUST00000162528 2395 ntTSL 1 (best) BASIC15.02■□□□□ -0
Cml3Q9JIY8 Ptpre-207ENSMUST00000211140 5753 ntAPPRIS P3 TSL 1 (best) BASIC15.02□□□□□ -0.01
Cml3Q9JIY8 Azi2-205ENSMUST00000133580 2156 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Cml3Q9JIY8 Samd10-201ENSMUST00000060173 2164 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Cml3Q9JIY8 Ubr3-202ENSMUST00000112251 8081 ntAPPRIS ALT2 TSL 5 BASIC15.02□□□□□ -0.01
Cml3Q9JIY8 Camk2b-201ENSMUST00000002817 1872 ntTSL 5 BASIC15.01□□□□□ -0.01
Cml3Q9JIY8 AU022751-201ENSMUST00000101698 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Cml3Q9JIY8 Pard3-209ENSMUST00000160272 5815 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Cml3Q9JIY8 Fn1-208ENSMUST00000186940 1350 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Cml3Q9JIY8 Ep300-201ENSMUST00000068387 9566 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Cml3Q9JIY8 Smap2-201ENSMUST00000043200 2905 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Cml3Q9JIY8 Gm37035-201ENSMUST00000194809 2148 ntBASIC15.01□□□□□ -0.01
Cml3Q9JIY8 C1qtnf5-203ENSMUST00000114818 1337 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
Cml3Q9JIY8 Six3os1-206ENSMUST00000175921 2737 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Cml3Q9JIY8 Tmem120a-201ENSMUST00000043378 1559 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Cml3Q9JIY8 Asph-217ENSMUST00000146441 2576 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Cml3Q9JIY8 Cd37-204ENSMUST00000209779 2541 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Cml3Q9JIY8 Bspry-202ENSMUST00000107449 2167 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Cml3Q9JIY8 Porcn-203ENSMUST00000089402 1839 ntAPPRIS ALT1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Cml3Q9JIY8 Shisa7-203ENSMUST00000119433 3481 ntAPPRIS P2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Cml3Q9JIY8 Spg7-211ENSMUST00000153285 2481 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
Cml3Q9JIY8 Ung-202ENSMUST00000102584 2136 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
Cml3Q9JIY8 Nkx2-3-201ENSMUST00000057178 2112 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Cml3Q9JIY8 Gm9954-202ENSMUST00000198686 4725 ntBASIC15.01□□□□□ -0.01
Cml3Q9JIY8 Dtnb-225ENSMUST00000174663 2381 ntAPPRIS ALT2 TSL 5 BASIC15□□□□□ -0.01
Cml3Q9JIY8 Ralgps2-205ENSMUST00000185198 2229 ntTSL 1 (best) BASIC15□□□□□ -0.01
Cml3Q9JIY8 Sh3bp1-204ENSMUST00000109698 1923 ntTSL 1 (best) BASIC15□□□□□ -0.01
Cml3Q9JIY8 Galnt3-201ENSMUST00000028378 3885 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Cml3Q9JIY8 Tspan17-201ENSMUST00000026993 1585 ntAPPRIS P2 TSL 1 (best) BASIC15□□□□□ -0.01
Cml3Q9JIY8 Mgat4b-201ENSMUST00000041725 2429 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Cml3Q9JIY8 Ybx2-205ENSMUST00000149194 1235 ntTSL 5 BASIC15□□□□□ -0.01
Cml3Q9JIY8 Atoh8-201ENSMUST00000042646 2355 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Cml3Q9JIY8 Iqsec2-202ENSMUST00000112604 5967 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
Cml3Q9JIY8 Rnf8-201ENSMUST00000024817 2077 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Cml3Q9JIY8 Mtmr3-202ENSMUST00000109943 5674 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Retrieved 100 of 76,532 protein–RNA pairs in 101.6 ms