Protein–RNA interactions for Protein: Q9JHB3

Timp4, Metalloproteinase inhibitor 4, mousemouse

Predictions only

Length 224 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Timp4Q9JHB3 Rnf26-206ENSMUST00000216511 2257 ntAPPRIS ALT2 TSL 5 BASIC20.61■□□□□ 0.89
Timp4Q9JHB3 Sapcd2-203ENSMUST00000114293 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
Timp4Q9JHB3 Zmym3-202ENSMUST00000117637 1593 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Timp4Q9JHB3 Rfc5-202ENSMUST00000111953 772 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Timp4Q9JHB3 Gas5-217ENSMUST00000161005 430 ntTSL 5 BASIC20.61■□□□□ 0.89
Timp4Q9JHB3 Gm45168-202ENSMUST00000206461 1069 ntTSL 5 BASIC20.61■□□□□ 0.89
Timp4Q9JHB3 Slc35b2-207ENSMUST00000226086 850 ntBASIC20.61■□□□□ 0.89
Timp4Q9JHB3 Ferd3l-201ENSMUST00000061035 886 ntAPPRIS P1 BASIC20.61■□□□□ 0.89
Timp4Q9JHB3 Tmem147-201ENSMUST00000006478 870 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Timp4Q9JHB3 Gm10153-201ENSMUST00000084415 522 ntTSL 5 BASIC20.61■□□□□ 0.89
Timp4Q9JHB3 Picalm-212ENSMUST00000208730 3427 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Timp4Q9JHB3 Ppm1b-201ENSMUST00000080217 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
Timp4Q9JHB3 Dynll2-201ENSMUST00000020775 2476 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Timp4Q9JHB3 Kctd9-201ENSMUST00000078053 3157 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Timp4Q9JHB3 Emc6-202ENSMUST00000108480 563 ntAPPRIS P1 TSL 2 BASIC20.6■□□□□ 0.89
Timp4Q9JHB3 Pianp-204ENSMUST00000160704 1116 ntAPPRIS P2 TSL 1 (best) BASIC20.6■□□□□ 0.89
Timp4Q9JHB3 Crnde-206ENSMUST00000179421 773 ntTSL 3 BASIC20.6■□□□□ 0.89
Timp4Q9JHB3 Fabp3-201ENSMUST00000070532 823 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Timp4Q9JHB3 Rpl13-201ENSMUST00000000756 780 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Timp4Q9JHB3 Fam168b-203ENSMUST00000167518 5058 ntTSL 5 BASIC20.6■□□□□ 0.89
Timp4Q9JHB3 Dusp22-203ENSMUST00000110310 2319 ntTSL 2 BASIC20.6■□□□□ 0.89
Timp4Q9JHB3 Grtp1-207ENSMUST00000211128 1416 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Timp4Q9JHB3 Camsap1-212ENSMUST00000183461 5090 ntAPPRIS ALT2 TSL 5 BASIC20.6■□□□□ 0.89
Timp4Q9JHB3 Cacnb1-203ENSMUST00000103144 2236 ntTSL 5 BASIC20.59■□□□□ 0.89
Timp4Q9JHB3 Noc2l-201ENSMUST00000179543 2785 ntAPPRIS P2 TSL 1 (best) BASIC20.59■□□□□ 0.89
Timp4Q9JHB3 Stau2-201ENSMUST00000027052 2763 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Timp4Q9JHB3 Mcub-201ENSMUST00000029624 1318 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Timp4Q9JHB3 Tmem230-206ENSMUST00000180286 1531 ntAPPRIS P1 TSL 2 BASIC20.59■□□□□ 0.89
Timp4Q9JHB3 Gm26571-201ENSMUST00000181399 666 ntBASIC20.59■□□□□ 0.89
Timp4Q9JHB3 Tmbim4-201ENSMUST00000020446 904 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Timp4Q9JHB3 Lmo1-202ENSMUST00000207178 912 ntAPPRIS ALT1 TSL 2 BASIC20.59■□□□□ 0.89
Timp4Q9JHB3 Hes3-202ENSMUST00000218045 962 ntAPPRIS ALT2 TSL 5 BASIC20.59■□□□□ 0.89
Timp4Q9JHB3 Dtymk-201ENSMUST00000027503 1003 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Timp4Q9JHB3 Kctd20-204ENSMUST00000122163 2423 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
Timp4Q9JHB3 Snx5-201ENSMUST00000028909 2419 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Timp4Q9JHB3 Aplp1-201ENSMUST00000006828 2343 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Timp4Q9JHB3 Hccs-202ENSMUST00000112115 2473 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Timp4Q9JHB3 Msx1-201ENSMUST00000063116 1935 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Timp4Q9JHB3 Mal2-201ENSMUST00000025356 2950 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Timp4Q9JHB3 Eml4-201ENSMUST00000049503 5109 ntAPPRIS P3 TSL 1 (best) BASIC20.58■□□□□ 0.89
Timp4Q9JHB3 Gm15043-201ENSMUST00000118843 1543 ntBASIC20.58■□□□□ 0.89
Timp4Q9JHB3 Foxf2-201ENSMUST00000042054 2363 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Timp4Q9JHB3 Ksr1-202ENSMUST00000108264 2748 ntTSL 5 BASIC20.58■□□□□ 0.89
Timp4Q9JHB3 AC099934.2-201ENSMUST00000196389 70 ntBASIC20.58■□□□□ 0.89
Timp4Q9JHB3 AC156953.1-201ENSMUST00000196953 70 ntBASIC20.58■□□□□ 0.89
Timp4Q9JHB3 AC157822.2-201ENSMUST00000200291 70 ntBASIC20.58■□□□□ 0.89
Timp4Q9JHB3 Rras-201ENSMUST00000044111 995 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Timp4Q9JHB3 Acvrl1-206ENSMUST00000121718 1906 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Timp4Q9JHB3 Crtc2-201ENSMUST00000029545 2747 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Timp4Q9JHB3 Mcmbp-202ENSMUST00000119081 2347 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
Timp4Q9JHB3 Kcnn2-203ENSMUST00000169783 1625 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Timp4Q9JHB3 H2-Ke6-201ENSMUST00000045467 965 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Timp4Q9JHB3 Hoxa5-201ENSMUST00000048794 1877 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Timp4Q9JHB3 Lsm14a-201ENSMUST00000085585 2944 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Timp4Q9JHB3 Homer1-206ENSMUST00000109493 2580 ntTSL 5 BASIC20.57■□□□□ 0.88
Timp4Q9JHB3 Gm10571-201ENSMUST00000097869 1638 ntBASIC20.56■□□□□ 0.88
Timp4Q9JHB3 Vstm4-201ENSMUST00000053175 2745 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Timp4Q9JHB3 Cpne2-202ENSMUST00000109537 2121 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
Timp4Q9JHB3 Sox17-208ENSMUST00000195555 1977 ntTSL 5 BASIC20.56■□□□□ 0.88
Timp4Q9JHB3 Gga1-201ENSMUST00000041587 3034 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Timp4Q9JHB3 Wnt16-203ENSMUST00000148639 1168 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Timp4Q9JHB3 Stum-202ENSMUST00000179826 601 ntAPPRIS ALT1 TSL 5 BASIC20.56■□□□□ 0.88
Timp4Q9JHB3 Hook1-201ENSMUST00000030306 5517 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Timp4Q9JHB3 Gm43006-201ENSMUST00000197702 1602 ntBASIC20.56■□□□□ 0.88
Timp4Q9JHB3 Derl2-207ENSMUST00000171041 1466 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Timp4Q9JHB3 Best2-201ENSMUST00000059072 1971 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Timp4Q9JHB3 Cox18-202ENSMUST00000118816 1307 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
Timp4Q9JHB3 Gp1bb-202ENSMUST00000167388 1847 ntAPPRIS ALT2 TSL 2 BASIC20.55■□□□□ 0.88
Timp4Q9JHB3 D11Wsu47e-201ENSMUST00000042227 2196 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Timp4Q9JHB3 Gm5475-201ENSMUST00000132119 2608 ntAPPRIS P5 TSL 1 (best) BASIC20.55■□□□□ 0.88
Timp4Q9JHB3 Ppp1r14c-201ENSMUST00000043374 2617 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Timp4Q9JHB3 Prcd-201ENSMUST00000106381 724 ntTSL 3 BASIC20.55■□□□□ 0.88
Timp4Q9JHB3 Gm13067-201ENSMUST00000134236 404 ntTSL 5 BASIC20.55■□□□□ 0.88
Timp4Q9JHB3 Gpx1-202ENSMUST00000191997 787 ntTSL 2 BASIC20.55■□□□□ 0.88
Timp4Q9JHB3 Emc9-201ENSMUST00000022828 855 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Timp4Q9JHB3 Gpx1-201ENSMUST00000082429 1072 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Timp4Q9JHB3 Jkamp-202ENSMUST00000117449 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
Timp4Q9JHB3 Gm43909-201ENSMUST00000203443 1876 ntBASIC20.55■□□□□ 0.88
Timp4Q9JHB3 Nfkbid-203ENSMUST00000108176 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
Timp4Q9JHB3 Hfe2-201ENSMUST00000049208 2028 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Timp4Q9JHB3 Memo1-201ENSMUST00000078459 1513 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Timp4Q9JHB3 Ccdc84-201ENSMUST00000053286 1725 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Timp4Q9JHB3 Gm42642-201ENSMUST00000200683 355 ntBASIC20.54■□□□□ 0.88
Timp4Q9JHB3 Retreg2-201ENSMUST00000097694 2561 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
Timp4Q9JHB3 Shisa4-201ENSMUST00000041240 1763 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Timp4Q9JHB3 Ttc9b-201ENSMUST00000008088 2052 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Timp4Q9JHB3 Pdcd2-205ENSMUST00000154293 1924 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Timp4Q9JHB3 Olfm1-204ENSMUST00000113920 2513 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Timp4Q9JHB3 Cnih2-201ENSMUST00000025805 1237 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Timp4Q9JHB3 Grifin-201ENSMUST00000042993 613 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Timp4Q9JHB3 Cdkn2a-201ENSMUST00000060501 852 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Timp4Q9JHB3 Zdhhc4-201ENSMUST00000001900 1364 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Timp4Q9JHB3 Zfp692-202ENSMUST00000153510 1887 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
Timp4Q9JHB3 Ptger3-202ENSMUST00000173533 2097 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
Timp4Q9JHB3 Brsk1-201ENSMUST00000048248 2996 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Timp4Q9JHB3 Taf4-201ENSMUST00000041618 4416 ntAPPRIS P2 TSL 1 (best) BASIC20.53■□□□□ 0.88
Timp4Q9JHB3 Arhgef26-201ENSMUST00000079300 5638 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Timp4Q9JHB3 Pan3-201ENSMUST00000031651 5048 ntAPPRIS P2 TSL 5 BASIC20.52■□□□□ 0.88
Timp4Q9JHB3 Slc9a2-203ENSMUST00000192345 2507 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Timp4Q9JHB3 Kcnd3os-201ENSMUST00000130683 1091 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Retrieved 100 of 76,532 protein–RNA pairs in 162.9 ms