Protein–RNA interactions for Protein: Q9DC33

Hmg20a, High mobility group protein 20A, mousemouse

Predictions only

Length 346 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmg20aQ9DC33 Ccdc6-203ENSMUST00000147545 5511 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
Hmg20aQ9DC33 Nsmf-206ENSMUST00000114388 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Hmg20aQ9DC33 U2af2-201ENSMUST00000005041 2183 ntAPPRIS ALT1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Hmg20aQ9DC33 Tsen54-202ENSMUST00000106481 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Hmg20aQ9DC33 Rbm18-201ENSMUST00000028251 2617 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Hmg20aQ9DC33 Tril-201ENSMUST00000127748 5363 ntAPPRIS P1 BASIC17.97■□□□□ 0.47
Hmg20aQ9DC33 Slc30a4-202ENSMUST00000099457 3170 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Hmg20aQ9DC33 Vmn1r17-205ENSMUST00000228342 2230 ntAPPRIS P2 BASIC17.97■□□□□ 0.47
Hmg20aQ9DC33 Asf1a-205ENSMUST00000219282 1150 ntTSL 5 BASIC17.97■□□□□ 0.47
Hmg20aQ9DC33 Card19-201ENSMUST00000048946 804 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Hmg20aQ9DC33 Gjd3-201ENSMUST00000062931 837 ntAPPRIS P1 BASIC17.97■□□□□ 0.47
Hmg20aQ9DC33 Paics-201ENSMUST00000031160 2482 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Hmg20aQ9DC33 Fbxw5-201ENSMUST00000015239 2388 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Hmg20aQ9DC33 Rnf44-204ENSMUST00000125871 4292 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Hmg20aQ9DC33 Rnf169-201ENSMUST00000080817 7147 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
Hmg20aQ9DC33 Tfeb-203ENSMUST00000113284 1974 ntTSL 5 BASIC17.97■□□□□ 0.47
Hmg20aQ9DC33 Tbc1d10a-201ENSMUST00000041042 1957 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Hmg20aQ9DC33 Lrrc75b-201ENSMUST00000051129 4601 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Hmg20aQ9DC33 Naif1-201ENSMUST00000048431 4650 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Hmg20aQ9DC33 E130208F15Rik-201ENSMUST00000098585 1733 ntAPPRIS P1 BASIC17.96■□□□□ 0.47
Hmg20aQ9DC33 Pgf-204ENSMUST00000223220 2080 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Hmg20aQ9DC33 Cox11-201ENSMUST00000020851 1224 ntAPPRIS P2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Hmg20aQ9DC33 Ppp1r14a-201ENSMUST00000048187 950 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Hmg20aQ9DC33 Zfp287-205ENSMUST00000150336 1605 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Hmg20aQ9DC33 Nek9-201ENSMUST00000040992 5386 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Hmg20aQ9DC33 Ddx41-201ENSMUST00000021956 2205 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Hmg20aQ9DC33 Phospho1-201ENSMUST00000054173 1910 ntAPPRIS P1 TSL 2 BASIC17.96■□□□□ 0.47
Hmg20aQ9DC33 Arpc5l-202ENSMUST00000112862 1339 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.46
Hmg20aQ9DC33 4930452B06Rik-201ENSMUST00000102996 2681 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Hmg20aQ9DC33 Shisa8-201ENSMUST00000179269 1804 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Hmg20aQ9DC33 Spast-202ENSMUST00000224711 2066 ntAPPRIS ALT2 BASIC17.95■□□□□ 0.46
Hmg20aQ9DC33 Llph-202ENSMUST00000130198 1463 ntAPPRIS P1 TSL 3 BASIC17.95■□□□□ 0.46
Hmg20aQ9DC33 Gm35558-201ENSMUST00000222675 2219 ntBASIC17.95■□□□□ 0.46
Hmg20aQ9DC33 Grip1-201ENSMUST00000041962 5343 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Hmg20aQ9DC33 Dbp-203ENSMUST00000211357 1252 ntTSL 5 BASIC17.95■□□□□ 0.46
Hmg20aQ9DC33 Fbxl5-204ENSMUST00000119523 2801 ntTSL 5 BASIC17.95■□□□□ 0.46
Hmg20aQ9DC33 Btbd17-201ENSMUST00000000206 1717 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Hmg20aQ9DC33 Zfp821-206ENSMUST00000212964 2033 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Hmg20aQ9DC33 Gm43653-201ENSMUST00000198136 1608 ntTSL 3 BASIC17.94■□□□□ 0.46
Hmg20aQ9DC33 Cwh43-202ENSMUST00000065543 2316 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Hmg20aQ9DC33 Sfrp5-201ENSMUST00000018966 1900 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Hmg20aQ9DC33 Bmpr1b-202ENSMUST00000098568 1910 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Hmg20aQ9DC33 Ezh2-204ENSMUST00000114618 2775 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Hmg20aQ9DC33 Farp1-201ENSMUST00000026635 4885 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
Hmg20aQ9DC33 Dnajc19-202ENSMUST00000108195 659 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Hmg20aQ9DC33 Sntb1-202ENSMUST00000110200 1225 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Hmg20aQ9DC33 1700016H13Rik-204ENSMUST00000120688 612 ntAPPRIS P1 TSL 3 BASIC17.94■□□□□ 0.46
Hmg20aQ9DC33 4930500M09Rik-202ENSMUST00000194988 1563 ntBASIC17.94■□□□□ 0.46
Hmg20aQ9DC33 A530010L16Rik-201ENSMUST00000212007 2336 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Hmg20aQ9DC33 Khsrp-201ENSMUST00000007814 3990 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Hmg20aQ9DC33 Cebpg-202ENSMUST00000130491 4709 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Hmg20aQ9DC33 Avl9-203ENSMUST00000177249 1614 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Hmg20aQ9DC33 Stim2-204ENSMUST00000201469 4892 ntAPPRIS ALT2 TSL 5 BASIC17.94■□□□□ 0.46
Hmg20aQ9DC33 Mtus2-205ENSMUST00000110515 1792 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Hmg20aQ9DC33 Ssx2ip-204ENSMUST00000106153 3446 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
Hmg20aQ9DC33 Klhl2-201ENSMUST00000034017 3412 ntAPPRIS P2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Hmg20aQ9DC33 Sox17-202ENSMUST00000116652 1512 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Hmg20aQ9DC33 Irgq-201ENSMUST00000049020 6083 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Hmg20aQ9DC33 Setd6-201ENSMUST00000034096 1707 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Hmg20aQ9DC33 Clcn4-206ENSMUST00000210594 2539 ntAPPRIS ALT2 TSL 5 BASIC17.93■□□□□ 0.46
Hmg20aQ9DC33 Anks6-202ENSMUST00000107747 3980 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Hmg20aQ9DC33 Smagp-202ENSMUST00000172334 952 ntAPPRIS P1 TSL 2 BASIC17.93■□□□□ 0.46
Hmg20aQ9DC33 Tceal6-201ENSMUST00000033783 1114 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Hmg20aQ9DC33 Hs3st5-202ENSMUST00000167191 2408 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Hmg20aQ9DC33 Ttc6-201ENSMUST00000101398 1484 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Hmg20aQ9DC33 Fam241b-203ENSMUST00000124615 1493 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Hmg20aQ9DC33 Plin5-202ENSMUST00000113072 1986 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Hmg20aQ9DC33 Gm3558-201ENSMUST00000163790 2055 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Hmg20aQ9DC33 Sorcs2-201ENSMUST00000037370 5707 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Hmg20aQ9DC33 Tmem145-201ENSMUST00000108409 2298 ntAPPRIS P2 TSL 2 BASIC17.92■□□□□ 0.46
Hmg20aQ9DC33 Unc13a-208ENSMUST00000177517 5654 ntAPPRIS ALT2 TSL 5 BASIC17.92■□□□□ 0.46
Hmg20aQ9DC33 Dnpep-204ENSMUST00000185797 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Hmg20aQ9DC33 Prob1-203ENSMUST00000190196 4888 ntAPPRIS P1 BASIC17.92■□□□□ 0.46
Hmg20aQ9DC33 Gm16192-201ENSMUST00000148357 937 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Hmg20aQ9DC33 Hpdl-201ENSMUST00000055436 1804 ntAPPRIS P1 BASIC17.92■□□□□ 0.46
Hmg20aQ9DC33 Slc17a7-202ENSMUST00000209634 1860 ntTSL 5 BASIC17.92■□□□□ 0.46
Hmg20aQ9DC33 Bend4-204ENSMUST00000201972 8268 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
Hmg20aQ9DC33 Ddx39b-203ENSMUST00000173731 2848 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Hmg20aQ9DC33 Obsl1-202ENSMUST00000113567 5679 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Hmg20aQ9DC33 2410002F23Rik-201ENSMUST00000055858 1982 ntAPPRIS P2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Hmg20aQ9DC33 Fgfr3-202ENSMUST00000087820 2630 ntAPPRIS ALT2 TSL 5 BASIC17.91■□□□□ 0.46
Hmg20aQ9DC33 Adssl1-202ENSMUST00000180015 1819 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Hmg20aQ9DC33 Rab3ip-203ENSMUST00000219109 1844 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Hmg20aQ9DC33 Dlgap2-203ENSMUST00000133298 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Hmg20aQ9DC33 Rragd-203ENSMUST00000098190 5008 ntAPPRIS P1 TSL 2 BASIC17.91■□□□□ 0.46
Hmg20aQ9DC33 Arid1a-205ENSMUST00000145664 8187 ntAPPRIS ALT2 TSL 2 BASIC17.91■□□□□ 0.46
Hmg20aQ9DC33 Ntn5-203ENSMUST00000183120 1491 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Hmg20aQ9DC33 1700034H15Rik-201ENSMUST00000069573 1461 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Hmg20aQ9DC33 Dedd-203ENSMUST00000111299 2322 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Hmg20aQ9DC33 St7l-201ENSMUST00000059271 5728 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
Hmg20aQ9DC33 Hs3st6-201ENSMUST00000044922 1219 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Hmg20aQ9DC33 1110008P14Rik-201ENSMUST00000048792 680 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Hmg20aQ9DC33 Tbkbp1-203ENSMUST00000107614 2391 ntAPPRIS ALT2 TSL 5 BASIC17.91■□□□□ 0.46
Hmg20aQ9DC33 Gm26795-201ENSMUST00000180993 1952 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Hmg20aQ9DC33 Man1c1-201ENSMUST00000038628 4285 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Hmg20aQ9DC33 Akt1s1-201ENSMUST00000054343 1592 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
Hmg20aQ9DC33 Nkd1-201ENSMUST00000034086 3035 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Hmg20aQ9DC33 Dnajc19-203ENSMUST00000117223 1695 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Hmg20aQ9DC33 Gm4779-203ENSMUST00000147742 1991 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
Hmg20aQ9DC33 Fance-201ENSMUST00000088007 1581 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
Retrieved 100 of 76,532 protein–RNA pairs in 74.1 ms