Protein–RNA interactions for Protein: Q8VC34

Rpap2, Putative RNA polymerase II subunit B1 CTD phosphatase Rpap2, mousemouse

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpap2Q8VC34 Nsfl1c-202ENSMUST00000089140 1486 ntAPPRIS P3 TSL 5 BASIC21.72■■□□□ 1.07
Rpap2Q8VC34 Appbp2os-202ENSMUST00000206972 447 ntBASIC21.72■■□□□ 1.07
Rpap2Q8VC34 AC158777.2-201ENSMUST00000228787 398 ntAPPRIS P1 BASIC21.72■■□□□ 1.07
Rpap2Q8VC34 Ttc39b-201ENSMUST00000030205 842 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
Rpap2Q8VC34 Gm9922-201ENSMUST00000066461 435 ntAPPRIS P1 BASIC21.72■■□□□ 1.07
Rpap2Q8VC34 Klrg2-201ENSMUST00000096030 2276 ntAPPRIS P2 TSL 1 (best) BASIC21.72■■□□□ 1.07
Rpap2Q8VC34 Kcnn4-201ENSMUST00000171904 1990 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Rpap2Q8VC34 Dnajb11-201ENSMUST00000004574 1927 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Rpap2Q8VC34 Rhoq-201ENSMUST00000024956 4151 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Rpap2Q8VC34 Taf3-203ENSMUST00000114907 695 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
Rpap2Q8VC34 Tmem79-202ENSMUST00000107552 2063 ntAPPRIS P1 TSL 5 BASIC21.71■■□□□ 1.07
Rpap2Q8VC34 P2ry2-202ENSMUST00000178340 2137 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Rpap2Q8VC34 Fam19a5-201ENSMUST00000068088 2575 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Rpap2Q8VC34 Mcam-201ENSMUST00000034650 2989 ntAPPRIS P2 TSL 1 (best) BASIC21.7■■□□□ 1.06
Rpap2Q8VC34 Slc9a2-203ENSMUST00000192345 2507 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
Rpap2Q8VC34 Gm15441-202ENSMUST00000107095 1653 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
Rpap2Q8VC34 Tusc3-202ENSMUST00000169034 1262 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
Rpap2Q8VC34 Spcs1-204ENSMUST00000226782 949 ntBASIC21.7■■□□□ 1.06
Rpap2Q8VC34 Tfdp2-202ENSMUST00000165120 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC21.7■■□□□ 1.06
Rpap2Q8VC34 Stmn4-201ENSMUST00000074523 1303 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Rpap2Q8VC34 Sox17-208ENSMUST00000195555 1977 ntTSL 5 BASIC21.7■■□□□ 1.06
Rpap2Q8VC34 Lrfn1-201ENSMUST00000055110 1479 ntAPPRIS P3 TSL 5 BASIC21.7■■□□□ 1.06
Rpap2Q8VC34 Schip1-205ENSMUST00000182532 2059 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
Rpap2Q8VC34 Ankrd9-203ENSMUST00000135131 1563 ntAPPRIS P2 TSL 1 (best) BASIC21.7■■□□□ 1.06
Rpap2Q8VC34 Maf1-205ENSMUST00000160853 1651 ntAPPRIS P2 TSL 1 (best) BASIC21.69■■□□□ 1.06
Rpap2Q8VC34 Ppp2r5a-201ENSMUST00000067976 3088 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Rpap2Q8VC34 Spns2-201ENSMUST00000045303 3241 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Rpap2Q8VC34 Paip1-201ENSMUST00000026520 2551 ntAPPRIS P3 TSL 1 (best) BASIC21.69■■□□□ 1.06
Rpap2Q8VC34 Pou3f3-201ENSMUST00000054883 7409 ntAPPRIS P1 BASIC21.69■■□□□ 1.06
Rpap2Q8VC34 Eif5a-209ENSMUST00000108612 1259 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Rpap2Q8VC34 Gm7160-202ENSMUST00000188519 1027 ntBASIC21.69■■□□□ 1.06
Rpap2Q8VC34 Zfp36l1-204ENSMUST00000219642 545 ntTSL 3 BASIC21.69■■□□□ 1.06
Rpap2Q8VC34 Wdr41-208ENSMUST00000222995 1112 ntTSL 5 BASIC21.69■■□□□ 1.06
Rpap2Q8VC34 Bag1-202ENSMUST00000108089 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC21.69■■□□□ 1.06
Rpap2Q8VC34 Mgll-202ENSMUST00000113581 1308 ntTSL 5 BASIC21.69■■□□□ 1.06
Rpap2Q8VC34 Ccdc85c-201ENSMUST00000136175 1302 ntAPPRIS ALT2 TSL 5 BASIC21.69■■□□□ 1.06
Rpap2Q8VC34 1700086O06Rik-202ENSMUST00000181871 1564 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
Rpap2Q8VC34 Lpcat3-201ENSMUST00000004381 2281 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Rpap2Q8VC34 Gm27454-201ENSMUST00000185090 204 ntBASIC21.68■■□□□ 1.06
Rpap2Q8VC34 Hspb1-201ENSMUST00000005077 903 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Rpap2Q8VC34 Gm3448-202ENSMUST00000097400 747 ntAPPRIS ALT2 TSL 5 BASIC21.68■■□□□ 1.06
Rpap2Q8VC34 C2cd4a-201ENSMUST00000054500 1395 ntAPPRIS P1 TSL 5 BASIC21.68■■□□□ 1.06
Rpap2Q8VC34 Derl2-207ENSMUST00000171041 1466 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
Rpap2Q8VC34 Rer1-201ENSMUST00000030914 1596 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Rpap2Q8VC34 Gp1bb-202ENSMUST00000167388 1847 ntAPPRIS ALT2 TSL 2 BASIC21.68■■□□□ 1.06
Rpap2Q8VC34 Col23a1-201ENSMUST00000102765 5658 ntAPPRIS P1 TSL 5 BASIC21.68■■□□□ 1.06
Rpap2Q8VC34 Tm9sf3-201ENSMUST00000025989 6144 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Rpap2Q8VC34 Inpp5a-203ENSMUST00000106098 2826 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Rpap2Q8VC34 Kifc3-201ENSMUST00000034240 3277 ntAPPRIS P4 TSL 1 (best) BASIC21.67■■□□□ 1.06
Rpap2Q8VC34 Frmd4a-201ENSMUST00000075767 6761 ntAPPRIS ALT2 TSL 1 (best) BASIC21.67■■□□□ 1.06
Rpap2Q8VC34 Asphd1-203ENSMUST00000106340 1647 ntAPPRIS ALT2 TSL 1 (best) BASIC21.67■■□□□ 1.06
Rpap2Q8VC34 Adrm1-201ENSMUST00000061437 1535 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Rpap2Q8VC34 Cdkl3-204ENSMUST00000109077 2605 ntAPPRIS ALT2 TSL 5 BASIC21.67■■□□□ 1.06
Rpap2Q8VC34 Tekt5-201ENSMUST00000043415 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC21.66■■□□□ 1.06
Rpap2Q8VC34 Map4k3-201ENSMUST00000025089 4225 ntAPPRIS P2 TSL 5 BASIC21.66■■□□□ 1.06
Rpap2Q8VC34 Rxrb-201ENSMUST00000044858 2623 ntAPPRIS P4 TSL 1 (best) BASIC21.66■■□□□ 1.06
Rpap2Q8VC34 Grsf1-201ENSMUST00000078945 2538 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Rpap2Q8VC34 4930412F12Rik-201ENSMUST00000211700 1471 ntBASIC21.66■■□□□ 1.06
Rpap2Q8VC34 Snx21-206ENSMUST00000174070 1446 ntTSL 5 BASIC21.66■■□□□ 1.06
Rpap2Q8VC34 Baiap2-201ENSMUST00000026436 2394 ntAPPRIS P4 TSL 1 (best) BASIC21.66■■□□□ 1.06
Rpap2Q8VC34 Dtymk-202ENSMUST00000112890 1055 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
Rpap2Q8VC34 Krtap5-2-201ENSMUST00000067978 937 ntAPPRIS ALT2 TSL 5 BASIC21.66■■□□□ 1.06
Rpap2Q8VC34 Tead1-204ENSMUST00000106638 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Rpap2Q8VC34 Agap2-202ENSMUST00000217941 5573 ntAPPRIS ALT2 TSL 1 (best) BASIC21.66■■□□□ 1.06
Rpap2Q8VC34 Ankrd9-204ENSMUST00000140788 1451 ntAPPRIS P2 TSL 3 BASIC21.65■■□□□ 1.06
Rpap2Q8VC34 Irx2-201ENSMUST00000074372 2625 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Rpap2Q8VC34 Eif5a-202ENSMUST00000070996 1373 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Rpap2Q8VC34 Mir7075-201ENSMUST00000184187 82 ntBASIC21.65■■□□□ 1.06
Rpap2Q8VC34 4930519A11Rik-202ENSMUST00000221053 667 ntTSL 3 BASIC21.65■■□□□ 1.06
Rpap2Q8VC34 Ss18l2-201ENSMUST00000035113 577 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Rpap2Q8VC34 1700007K13Rik-201ENSMUST00000086370 812 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Rpap2Q8VC34 Pdpk1-205ENSMUST00000115411 1724 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
Rpap2Q8VC34 Klhl32-201ENSMUST00000084781 2287 ntTSL 1 (best) BASIC21.64■■□□□ 1.06
Rpap2Q8VC34 Ltb4r2-201ENSMUST00000044554 1439 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
Rpap2Q8VC34 Uba2-201ENSMUST00000102746 2579 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
Rpap2Q8VC34 Moap1-201ENSMUST00000173760 1312 ntAPPRIS P1 TSL 2 BASIC21.64■■□□□ 1.05
Rpap2Q8VC34 Sost-201ENSMUST00000001534 2066 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Rpap2Q8VC34 AA386476-201ENSMUST00000098781 1665 ntBASIC21.64■■□□□ 1.05
Rpap2Q8VC34 0610010K14Rik-208ENSMUST00000108578 880 ntAPPRIS ALT2 TSL 1 (best) BASIC21.64■■□□□ 1.05
Rpap2Q8VC34 Gm12251-201ENSMUST00000117893 792 ntBASIC21.64■■□□□ 1.05
Rpap2Q8VC34 Krtap5-5-201ENSMUST00000097942 1177 ntAPPRIS P1 BASIC21.64■■□□□ 1.05
Rpap2Q8VC34 Smad4-201ENSMUST00000025393 3384 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Rpap2Q8VC34 2310022B05Rik-201ENSMUST00000034464 3307 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Rpap2Q8VC34 Nxph4-201ENSMUST00000095266 1675 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Rpap2Q8VC34 Rab7-205ENSMUST00000113600 2159 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Rpap2Q8VC34 Sox8-202ENSMUST00000173447 928 ntAPPRIS ALT2 TSL 1 (best) BASIC21.63■■□□□ 1.05
Rpap2Q8VC34 Ntsr2-202ENSMUST00000220892 846 ntTSL 3 BASIC21.63■■□□□ 1.05
Rpap2Q8VC34 Spint1-203ENSMUST00000110817 2323 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Rpap2Q8VC34 Dtnb-210ENSMUST00000173199 2820 ntAPPRIS ALT2 TSL 5 BASIC21.63■■□□□ 1.05
Rpap2Q8VC34 Hes1-201ENSMUST00000023171 1468 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Rpap2Q8VC34 Zfp3-201ENSMUST00000060444 2061 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Rpap2Q8VC34 Rcl1-201ENSMUST00000064393 1803 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Rpap2Q8VC34 Rab34-202ENSMUST00000056241 1558 ntTSL 5 BASIC21.62■■□□□ 1.05
Rpap2Q8VC34 Kif27-203ENSMUST00000225388 5121 ntAPPRIS P1 BASIC21.62■■□□□ 1.05
Rpap2Q8VC34 Tarbp2-202ENSMUST00000100168 1278 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
Rpap2Q8VC34 Pkig-204ENSMUST00000126182 762 ntAPPRIS P1 TSL 2 BASIC21.62■■□□□ 1.05
Rpap2Q8VC34 Psmg4-202ENSMUST00000147632 555 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Rpap2Q8VC34 2310061I04Rik-203ENSMUST00000148482 1193 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
Rpap2Q8VC34 Lgr4-202ENSMUST00000111037 4988 ntTSL 5 BASIC21.62■■□□□ 1.05
Rpap2Q8VC34 Bspry-202ENSMUST00000107449 2167 ntAPPRIS ALT2 TSL 1 (best) BASIC21.62■■□□□ 1.05
Retrieved 100 of 76,532 protein–RNA pairs in 23.4 ms