Protein–RNA interactions for Protein: Q8CDN1

Uncharacterized protein C3orf20 homolog, mousemouse

Predictions only

Length 933 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Q8CDN1 Gm16076-201ENSMUST00000140116 480 ntTSL 3 BASIC20.4■□□□□ 0.86
Q8CDN1 Trp73os-201ENSMUST00000143429 2192 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
Q8CDN1 Reep6-207ENSMUST00000186864 2015 ntAPPRIS P3 TSL 1 (best) BASIC20.4■□□□□ 0.86
Q8CDN1 AC137127.1-201ENSMUST00000213466 1078 ntBASIC20.4■□□□□ 0.86
Q8CDN1 Inpp5a-201ENSMUST00000026550 2774 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
Q8CDN1 Arv1-201ENSMUST00000034463 1165 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Q8CDN1 Tmem147-201ENSMUST00000006478 870 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Q8CDN1 Arnt2-201ENSMUST00000085077 6151 ntAPPRIS P2 TSL 1 (best) BASIC20.4■□□□□ 0.86
Q8CDN1 Gm37035-201ENSMUST00000194809 2148 ntBASIC20.39■□□□□ 0.86
Q8CDN1 Mtfmt-201ENSMUST00000074792 2042 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
Q8CDN1 Dus1l-203ENSMUST00000106135 1863 ntAPPRIS ALT2 TSL 5 BASIC20.39■□□□□ 0.86
Q8CDN1 Gm42642-201ENSMUST00000200683 355 ntBASIC20.39■□□□□ 0.85
Q8CDN1 Emc9-201ENSMUST00000022828 855 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Q8CDN1 Stoml2-201ENSMUST00000030169 1874 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Q8CDN1 Zcchc14-201ENSMUST00000046386 7444 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Q8CDN1 Zfp523-201ENSMUST00000002318 2710 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Q8CDN1 Frat1-201ENSMUST00000087155 2614 ntAPPRIS P1 BASIC20.39■□□□□ 0.85
Q8CDN1 Cbln2-201ENSMUST00000068423 2475 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Q8CDN1 Grtp1-207ENSMUST00000211128 1416 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Q8CDN1 Smkr-ps-202ENSMUST00000141679 901 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Q8CDN1 Tmbim6-202ENSMUST00000159209 944 ntAPPRIS P1 TSL 5 BASIC20.38■□□□□ 0.85
Q8CDN1 Gas5-217ENSMUST00000161005 430 ntTSL 5 BASIC20.38■□□□□ 0.85
Q8CDN1 Yjefn3-203ENSMUST00000180068 629 ntTSL 5 BASIC20.38■□□□□ 0.85
Q8CDN1 Hes3-202ENSMUST00000218045 962 ntAPPRIS ALT2 TSL 5 BASIC20.38■□□□□ 0.85
Q8CDN1 AC164629.5-201ENSMUST00000220387 632 ntBASIC20.38■□□□□ 0.85
Q8CDN1 H2-Ke6-201ENSMUST00000045467 965 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Q8CDN1 Bcl10-201ENSMUST00000029842 1949 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Q8CDN1 Agap2-201ENSMUST00000039259 5633 ntAPPRIS P2 TSL 1 (best) BASIC20.37■□□□□ 0.85
Q8CDN1 Ddah2-201ENSMUST00000007255 1342 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Q8CDN1 Emc6-202ENSMUST00000108480 563 ntAPPRIS P1 TSL 2 BASIC20.37■□□□□ 0.85
Q8CDN1 Kcnd3os-201ENSMUST00000130683 1091 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Q8CDN1 Ltb-201ENSMUST00000025262 1160 ntAPPRIS P2 TSL 1 (best) BASIC20.37■□□□□ 0.85
Q8CDN1 Grifin-201ENSMUST00000042993 613 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Q8CDN1 Matr3-209ENSMUST00000188275 1951 ntTSL 5 BASIC20.37■□□□□ 0.85
Q8CDN1 Cotl1-202ENSMUST00000168698 1520 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Q8CDN1 Faap24-201ENSMUST00000032704 1857 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Q8CDN1 Cacnb1-202ENSMUST00000092736 1880 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Q8CDN1 Ankrd33b-203ENSMUST00000110410 2070 ntAPPRIS P3 TSL 1 (best) BASIC20.36■□□□□ 0.85
Q8CDN1 Pgam5-201ENSMUST00000059229 2044 ntAPPRIS P3 TSL 1 (best) BASIC20.36■□□□□ 0.85
Q8CDN1 Zfp467-202ENSMUST00000114556 2287 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Q8CDN1 Zfp36l1-202ENSMUST00000165114 1934 ntAPPRIS P1 TSL 5 BASIC20.36■□□□□ 0.85
Q8CDN1 Gm10849-201ENSMUST00000100397 618 ntBASIC20.36■□□□□ 0.85
Q8CDN1 Cox14-201ENSMUST00000023761 723 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Q8CDN1 Lacc1-201ENSMUST00000062789 2444 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Q8CDN1 Zfp69-201ENSMUST00000106280 2362 ntAPPRIS P1 TSL 5 BASIC20.36■□□□□ 0.85
Q8CDN1 3110053B16Rik-202ENSMUST00000140360 2004 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Q8CDN1 Dbf4-207ENSMUST00000171808 2402 ntAPPRIS P3 TSL 1 (best) BASIC20.35■□□□□ 0.85
Q8CDN1 Sebox-202ENSMUST00000125670 1300 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Q8CDN1 Mettl25-201ENSMUST00000046638 2033 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Q8CDN1 Impa2-201ENSMUST00000025403 1661 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Q8CDN1 D030056L22Rik-201ENSMUST00000055792 1631 ntAPPRIS P2 TSL 1 (best) BASIC20.35■□□□□ 0.85
Q8CDN1 Cox18-202ENSMUST00000118816 1307 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
Q8CDN1 Lhx2-201ENSMUST00000000253 2840 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Q8CDN1 Gm26682-201ENSMUST00000180850 1729 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Q8CDN1 Gpx1-202ENSMUST00000191997 787 ntTSL 2 BASIC20.34■□□□□ 0.85
Q8CDN1 Gpx1-201ENSMUST00000082429 1072 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Q8CDN1 Hist1h2ag-201ENSMUST00000091741 485 ntAPPRIS P1 BASIC20.34■□□□□ 0.85
Q8CDN1 Hoxa11os-201ENSMUST00000134512 1839 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Q8CDN1 Notum-203ENSMUST00000106178 2012 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Q8CDN1 Arhgap23-201ENSMUST00000093940 2409 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Q8CDN1 Gdf15-202ENSMUST00000110103 1380 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Q8CDN1 Zbtb11os1-201ENSMUST00000186480 1350 ntBASIC20.34■□□□□ 0.85
Q8CDN1 Map4k3-202ENSMUST00000112389 4231 ntAPPRIS ALT1 TSL 5 BASIC20.33■□□□□ 0.85
Q8CDN1 Hopxos-201ENSMUST00000148568 1661 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
Q8CDN1 Stum-202ENSMUST00000179826 601 ntAPPRIS ALT1 TSL 5 BASIC20.33■□□□□ 0.85
Q8CDN1 Gm10033-202ENSMUST00000211874 928 ntBASIC20.33■□□□□ 0.85
Q8CDN1 Kif1bp-202ENSMUST00000159704 2622 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
Q8CDN1 Picalm-212ENSMUST00000208730 3427 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
Q8CDN1 Nxph4-201ENSMUST00000095266 1675 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Q8CDN1 Gm9934-201ENSMUST00000098303 2077 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Q8CDN1 Gm7291-201ENSMUST00000199147 382 ntBASIC20.32■□□□□ 0.84
Q8CDN1 Gm42569-201ENSMUST00000200539 472 ntBASIC20.32■□□□□ 0.84
Q8CDN1 Gm6916-201ENSMUST00000205277 828 ntTSL 3 BASIC20.32■□□□□ 0.84
Q8CDN1 Gm9817-201ENSMUST00000054395 2531 ntAPPRIS P1 BASIC20.32■□□□□ 0.84
Q8CDN1 Ccnjl-201ENSMUST00000050574 2672 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Q8CDN1 Cntln-204ENSMUST00000169371 5365 ntAPPRIS ALT2 TSL 5 BASIC20.32■□□□□ 0.84
Q8CDN1 Npr3-205ENSMUST00000228603 2437 ntAPPRIS ALT2 BASIC20.32■□□□□ 0.84
Q8CDN1 Laptm4a-201ENSMUST00000020909 1773 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Q8CDN1 Zbtb7a-202ENSMUST00000117956 1863 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Q8CDN1 Pdp1-204ENSMUST00000108299 2588 ntAPPRIS ALT2 TSL 2 BASIC20.31■□□□□ 0.84
Q8CDN1 Nfix-201ENSMUST00000076715 1403 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Q8CDN1 Wdr4-203ENSMUST00000167419 813 ntTSL 3 BASIC20.31■□□□□ 0.84
Q8CDN1 Dtymk-201ENSMUST00000027503 1003 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Q8CDN1 Rras-201ENSMUST00000044111 995 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Q8CDN1 Mfn1-201ENSMUST00000091257 4562 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Q8CDN1 Vstm4-201ENSMUST00000053175 2745 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Q8CDN1 Nfkbid-203ENSMUST00000108176 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
Q8CDN1 Noa1-201ENSMUST00000047860 2288 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Q8CDN1 Gm12524-201ENSMUST00000143109 1583 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Q8CDN1 Rab28-203ENSMUST00000201422 1697 ntTSL 5 BASIC20.3■□□□□ 0.84
Q8CDN1 Dtnb-216ENSMUST00000173736 2175 ntAPPRIS ALT2 TSL 5 BASIC20.3■□□□□ 0.84
Q8CDN1 Gm10571-201ENSMUST00000097869 1638 ntBASIC20.3■□□□□ 0.84
Q8CDN1 Cntfr-203ENSMUST00000102961 1995 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Q8CDN1 Tsen54-201ENSMUST00000021134 1979 ntAPPRIS P2 TSL 1 (best) BASIC20.3■□□□□ 0.84
Q8CDN1 AC152827.1-201ENSMUST00000221143 2189 ntBASIC20.29■□□□□ 0.84
Q8CDN1 Kcnk15-202ENSMUST00000109396 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
Q8CDN1 Tbxa2r-202ENSMUST00000220312 1919 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Q8CDN1 Syncrip-201ENSMUST00000069221 9450 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
Q8CDN1 Ctdsp1-201ENSMUST00000027367 2876 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Q8CDN1 Ldb1-202ENSMUST00000056931 2295 ntAPPRIS P2 TSL 1 (best) BASIC20.29■□□□□ 0.84
Retrieved 100 of 76,532 protein–RNA pairs in 39.3 ms