Protein–RNA interactions for Protein: Q8CDD9

Lrif1, Ligand-dependent nuclear receptor-interacting factor 1, mousemouse

Predictions only

Length 755 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lrif1Q8CDD9 Maf-202ENSMUST00000109104 6360 ntAPPRIS P2 BASIC19.45■□□□□ 0.7
Lrif1Q8CDD9 Rtca-201ENSMUST00000000348 1594 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Lrif1Q8CDD9 Hcn2-202ENSMUST00000099513 3195 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Lrif1Q8CDD9 Nfkbil1-201ENSMUST00000048994 1447 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Lrif1Q8CDD9 Smox-205ENSMUST00000110182 985 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Lrif1Q8CDD9 Gemin7-203ENSMUST00000119912 653 ntAPPRIS P1 TSL 3 BASIC19.45■□□□□ 0.7
Lrif1Q8CDD9 Hoxd3os1-204ENSMUST00000156342 796 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Lrif1Q8CDD9 Rabac1-201ENSMUST00000076961 899 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Lrif1Q8CDD9 Rps2-ps6-201ENSMUST00000095471 855 ntBASIC19.45■□□□□ 0.7
Lrif1Q8CDD9 Tmem179-201ENSMUST00000066791 2380 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Lrif1Q8CDD9 Bcas2-201ENSMUST00000005830 1467 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Lrif1Q8CDD9 Tsen54-202ENSMUST00000106481 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Lrif1Q8CDD9 1700034P13Rik-201ENSMUST00000181358 1343 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Lrif1Q8CDD9 Fzd5-202ENSMUST00000116133 2895 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Lrif1Q8CDD9 Dnajb11-201ENSMUST00000004574 1927 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Lrif1Q8CDD9 Tmem41a-201ENSMUST00000023562 1359 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Lrif1Q8CDD9 Uckl1os-201ENSMUST00000122831 2018 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Lrif1Q8CDD9 Dnaja4-202ENSMUST00000120452 1827 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Lrif1Q8CDD9 Mycl-202ENSMUST00000106252 3293 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Lrif1Q8CDD9 Brd1-201ENSMUST00000088911 4702 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Lrif1Q8CDD9 Fgf3-201ENSMUST00000105898 2299 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Lrif1Q8CDD9 Rnf26-201ENSMUST00000056328 2724 ntAPPRIS P2 BASIC19.44■□□□□ 0.7
Lrif1Q8CDD9 Col23a1-201ENSMUST00000102765 5658 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
Lrif1Q8CDD9 Arpp19-206ENSMUST00000168301 599 ntTSL 5 BASIC19.44■□□□□ 0.7
Lrif1Q8CDD9 Gm7417-201ENSMUST00000192950 473 ntBASIC19.44■□□□□ 0.7
Lrif1Q8CDD9 Cdc42ep5-201ENSMUST00000076831 1025 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Lrif1Q8CDD9 B630019K06Rik-201ENSMUST00000064196 2583 ntAPPRIS P1 BASIC19.44■□□□□ 0.7
Lrif1Q8CDD9 Slc3a2-201ENSMUST00000010239 1819 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
Lrif1Q8CDD9 Prr7-201ENSMUST00000046533 1359 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Lrif1Q8CDD9 Xrcc6-202ENSMUST00000100399 3296 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Lrif1Q8CDD9 Barx2-201ENSMUST00000116615 1968 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Lrif1Q8CDD9 Adamtsl5-201ENSMUST00000095446 1957 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
Lrif1Q8CDD9 Ltb-203ENSMUST00000173600 905 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
Lrif1Q8CDD9 A730035I17Rik-205ENSMUST00000205851 684 ntBASIC19.43■□□□□ 0.7
Lrif1Q8CDD9 Egln1-201ENSMUST00000034469 3594 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Lrif1Q8CDD9 Nsmf-204ENSMUST00000102931 2830 ntTSL 5 BASIC19.43■□□□□ 0.7
Lrif1Q8CDD9 Fbxl5-204ENSMUST00000119523 2801 ntTSL 5 BASIC19.43■□□□□ 0.7
Lrif1Q8CDD9 B3gnt9-201ENSMUST00000093217 2325 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
Lrif1Q8CDD9 Akt1s1-204ENSMUST00000107885 1812 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Lrif1Q8CDD9 Zfp653-201ENSMUST00000043922 2108 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
Lrif1Q8CDD9 Rapgef1-201ENSMUST00000091146 6212 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Lrif1Q8CDD9 Prss16-201ENSMUST00000006341 2155 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Lrif1Q8CDD9 Msx1-201ENSMUST00000063116 1935 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Lrif1Q8CDD9 Rims1-209ENSMUST00000218140 1434 ntTSL 5 BASIC19.42■□□□□ 0.7
Lrif1Q8CDD9 Pithd1-201ENSMUST00000105851 1700 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Lrif1Q8CDD9 Chmp7-201ENSMUST00000036381 2649 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Lrif1Q8CDD9 Lhx8-201ENSMUST00000177846 2076 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Lrif1Q8CDD9 Porcn-203ENSMUST00000089402 1839 ntAPPRIS ALT1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Lrif1Q8CDD9 Psme4-201ENSMUST00000041231 6491 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Lrif1Q8CDD9 Gabbr1-209ENSMUST00000174456 1595 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Lrif1Q8CDD9 Tmem120a-201ENSMUST00000043378 1559 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Lrif1Q8CDD9 Gm10399-202ENSMUST00000202768 748 ntBASIC19.42■□□□□ 0.7
Lrif1Q8CDD9 4930527J03Rik-201ENSMUST00000094270 543 ntBASIC19.42■□□□□ 0.7
Lrif1Q8CDD9 Acvrl1-206ENSMUST00000121718 1906 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Lrif1Q8CDD9 Hpse-202ENSMUST00000112908 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Lrif1Q8CDD9 Fam216a-201ENSMUST00000031419 1388 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Lrif1Q8CDD9 Art5-204ENSMUST00000106937 1713 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Lrif1Q8CDD9 Meis3-201ENSMUST00000002495 1731 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Lrif1Q8CDD9 Snx4-201ENSMUST00000023502 2442 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Lrif1Q8CDD9 Tmem55b-205ENSMUST00000160835 2755 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
Lrif1Q8CDD9 Prss50-201ENSMUST00000051097 1456 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Lrif1Q8CDD9 Syce3-201ENSMUST00000109314 448 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Lrif1Q8CDD9 Gm40881-201ENSMUST00000223397 166 ntBASIC19.41■□□□□ 0.7
Lrif1Q8CDD9 Cdkl3-207ENSMUST00000109080 2749 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Lrif1Q8CDD9 Nfe2-201ENSMUST00000075192 1697 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Lrif1Q8CDD9 Nnat-207ENSMUST00000173041 760 ntTSL 5 BASIC19.4■□□□□ 0.7
Lrif1Q8CDD9 Pgp-201ENSMUST00000053024 1027 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Lrif1Q8CDD9 2210011C24Rik-204ENSMUST00000190457 1351 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Lrif1Q8CDD9 Pnldc1-201ENSMUST00000163394 1689 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Lrif1Q8CDD9 Smox-206ENSMUST00000110183 1159 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Lrif1Q8CDD9 Gm28417-201ENSMUST00000185218 785 ntTSL 3 BASIC19.39■□□□□ 0.69
Lrif1Q8CDD9 Gm35065-201ENSMUST00000199206 428 ntTSL 3 BASIC19.39■□□□□ 0.69
Lrif1Q8CDD9 Bri3-201ENSMUST00000056578 955 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Lrif1Q8CDD9 Cgrrf1-201ENSMUST00000068532 1324 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Lrif1Q8CDD9 Bmp6-201ENSMUST00000171970 3593 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Lrif1Q8CDD9 Zmym3-207ENSMUST00000120201 1859 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Lrif1Q8CDD9 Dio3-202ENSMUST00000173014 2030 ntAPPRIS P1 BASIC19.39■□□□□ 0.69
Lrif1Q8CDD9 Tesmin-201ENSMUST00000025840 2234 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
Lrif1Q8CDD9 Pomgnt1-203ENSMUST00000106498 2719 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Lrif1Q8CDD9 Pde6d-203ENSMUST00000146220 879 ntTSL 2 BASIC19.38■□□□□ 0.69
Lrif1Q8CDD9 Tex30-208ENSMUST00000147571 1360 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Lrif1Q8CDD9 Tmprss5-205ENSMUST00000170246 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Lrif1Q8CDD9 Kcnn4-201ENSMUST00000171904 1990 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Lrif1Q8CDD9 Slc25a16-201ENSMUST00000044977 3145 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Lrif1Q8CDD9 Vps26a-201ENSMUST00000092473 2712 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Lrif1Q8CDD9 Pkd2-201ENSMUST00000086831 5219 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Lrif1Q8CDD9 Kcng3-201ENSMUST00000051482 3356 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Lrif1Q8CDD9 Btbd2-201ENSMUST00000003434 3026 ntAPPRIS P2 TSL 5 BASIC19.38■□□□□ 0.69
Lrif1Q8CDD9 Csnk1a1-201ENSMUST00000115246 1484 ntTSL 5 BASIC19.37■□□□□ 0.69
Lrif1Q8CDD9 Elac2-201ENSMUST00000071891 2771 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Lrif1Q8CDD9 Tmem74b-202ENSMUST00000109872 1399 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Lrif1Q8CDD9 Atf6b-201ENSMUST00000015605 2566 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Lrif1Q8CDD9 Rgs10-205ENSMUST00000145739 564 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Lrif1Q8CDD9 Cacng4-201ENSMUST00000021066 3500 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Lrif1Q8CDD9 Cpsf4-202ENSMUST00000160422 1756 ntAPPRIS ALT1 TSL 5 BASIC19.37■□□□□ 0.69
Lrif1Q8CDD9 Tk2-205ENSMUST00000212275 1507 ntAPPRIS P1 TSL 2 BASIC19.36■□□□□ 0.69
Lrif1Q8CDD9 Sucla2-201ENSMUST00000022706 1545 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Lrif1Q8CDD9 Uqcrfs1-201ENSMUST00000042834 1363 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Lrif1Q8CDD9 Zfand2b-201ENSMUST00000027394 1316 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Lrif1Q8CDD9 Clta-206ENSMUST00000170241 1079 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Retrieved 100 of 76,532 protein–RNA pairs in 34.1 ms