Protein–RNA interactions for Protein: Q8CC84

Lysmd4, LysM and putative peptidoglycan-binding domain-containing protein 4, mousemouse

Predictions only

Length 293 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lysmd4Q8CC84 Slc36a4-202ENSMUST00000115588 1745 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Lysmd4Q8CC84 Ppp2r1b-209ENSMUST00000176349 1890 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.43
Lysmd4Q8CC84 Exoc5-206ENSMUST00000161504 2582 ntTSL 5 BASIC17.71■□□□□ 0.43
Lysmd4Q8CC84 Plekha1-211ENSMUST00000151119 2397 ntTSL 1 (best) BASIC17.71■□□□□ 0.42
Lysmd4Q8CC84 Setd3-201ENSMUST00000071095 2755 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Lysmd4Q8CC84 Sox17-208ENSMUST00000195555 1977 ntTSL 5 BASIC17.7■□□□□ 0.42
Lysmd4Q8CC84 Gm38399-201ENSMUST00000112103 1645 ntTSL 2 BASIC17.7■□□□□ 0.42
Lysmd4Q8CC84 Ssr2-201ENSMUST00000035785 1189 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Lysmd4Q8CC84 Tmem179-201ENSMUST00000066791 2380 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Lysmd4Q8CC84 Mrgbp-201ENSMUST00000029085 1510 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Lysmd4Q8CC84 Rbfox3-202ENSMUST00000069343 1553 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Lysmd4Q8CC84 Ppp1r21-201ENSMUST00000038551 3141 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Lysmd4Q8CC84 Donson-202ENSMUST00000114031 2147 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
Lysmd4Q8CC84 Lrfn4-202ENSMUST00000113822 2918 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Lysmd4Q8CC84 Dio3-202ENSMUST00000173014 2030 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
Lysmd4Q8CC84 Dexi-201ENSMUST00000038281 1389 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Lysmd4Q8CC84 Foxf1-201ENSMUST00000181504 2415 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Lysmd4Q8CC84 Rell2-212ENSMUST00000177058 1762 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
Lysmd4Q8CC84 Vim-206ENSMUST00000193675 1777 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
Lysmd4Q8CC84 Gm2415-202ENSMUST00000134688 401 ntTSL 2 BASIC17.69■□□□□ 0.42
Lysmd4Q8CC84 Lrrc36-204ENSMUST00000213547 2396 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
Lysmd4Q8CC84 Cbln2-202ENSMUST00000122079 2549 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Lysmd4Q8CC84 Pcnp-202ENSMUST00000114444 2295 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Lysmd4Q8CC84 Ube4b-202ENSMUST00000103212 5626 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Lysmd4Q8CC84 Lpcat2-205ENSMUST00000210099 2179 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Lysmd4Q8CC84 Tmem41a-201ENSMUST00000023562 1359 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Lysmd4Q8CC84 Ltbp3-201ENSMUST00000081496 5190 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
Lysmd4Q8CC84 Pknox2-201ENSMUST00000039674 3632 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Lysmd4Q8CC84 Gng12-203ENSMUST00000114224 680 ntAPPRIS P1 TSL 3 BASIC17.68■□□□□ 0.42
Lysmd4Q8CC84 Gng12-206ENSMUST00000114227 1125 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Lysmd4Q8CC84 Neurl1b-202ENSMUST00000182897 1231 ntTSL 5 BASIC17.68■□□□□ 0.42
Lysmd4Q8CC84 4930524J08Rik-201ENSMUST00000046721 603 ntAPPRIS P1 BASIC17.68■□□□□ 0.42
Lysmd4Q8CC84 Hs3st4-201ENSMUST00000106437 3189 ntAPPRIS P1 TSL 3 BASIC17.68■□□□□ 0.42
Lysmd4Q8CC84 Stoml1-201ENSMUST00000034883 1984 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Lysmd4Q8CC84 Sac3d1-201ENSMUST00000113533 1374 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Lysmd4Q8CC84 Slc22a23-201ENSMUST00000040336 6251 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Lysmd4Q8CC84 Bmpr1a-201ENSMUST00000049005 5956 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Lysmd4Q8CC84 Arpc5-202ENSMUST00000097536 1737 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Lysmd4Q8CC84 Smap2-201ENSMUST00000043200 2905 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Lysmd4Q8CC84 Zfp467-202ENSMUST00000114556 2287 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Lysmd4Q8CC84 Trir-201ENSMUST00000047281 902 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Lysmd4Q8CC84 Vegfa-207ENSMUST00000142351 1973 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Lysmd4Q8CC84 Meis3-205ENSMUST00000176506 1839 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Lysmd4Q8CC84 Gnas-206ENSMUST00000109084 1695 ntAPPRIS ALT1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Lysmd4Q8CC84 Nxph4-201ENSMUST00000095266 1675 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Lysmd4Q8CC84 Gga2-201ENSMUST00000033160 4915 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Lysmd4Q8CC84 5031439G07Rik-201ENSMUST00000047144 6845 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Lysmd4Q8CC84 Gfra4-206ENSMUST00000110240 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Lysmd4Q8CC84 Clta-206ENSMUST00000170241 1079 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Lysmd4Q8CC84 Gm20684-201ENSMUST00000176744 380 ntTSL 3 BASIC17.66■□□□□ 0.42
Lysmd4Q8CC84 Gm18190-203ENSMUST00000209944 389 ntTSL 2 BASIC17.66■□□□□ 0.42
Lysmd4Q8CC84 Tmem11-203ENSMUST00000168218 1511 ntTSL 2 BASIC17.66■□□□□ 0.42
Lysmd4Q8CC84 Hyal2-203ENSMUST00000193747 1532 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Lysmd4Q8CC84 Numbl-201ENSMUST00000079258 2760 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Lysmd4Q8CC84 Pus1-201ENSMUST00000031481 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Lysmd4Q8CC84 Ier3ip1-201ENSMUST00000026487 1395 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Lysmd4Q8CC84 Gm43231-201ENSMUST00000202960 2258 ntBASIC17.65■□□□□ 0.42
Lysmd4Q8CC84 Bicdl2-201ENSMUST00000062967 1913 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Lysmd4Q8CC84 Vamp4-204ENSMUST00000135241 1461 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Lysmd4Q8CC84 Tmem185a-201ENSMUST00000101506 2429 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Lysmd4Q8CC84 Tsc22d1-203ENSMUST00000101618 1043 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Lysmd4Q8CC84 Nudt6-204ENSMUST00000108118 935 ntTSL 5 BASIC17.65■□□□□ 0.42
Lysmd4Q8CC84 Psmg1-202ENSMUST00000117044 807 ntTSL 5 BASIC17.65■□□□□ 0.42
Lysmd4Q8CC84 Rem2-201ENSMUST00000164697 1194 ntTSL 5 BASIC17.65■□□□□ 0.42
Lysmd4Q8CC84 Mir6236-201ENSMUST00000184437 123 ntBASIC17.65■□□□□ 0.42
Lysmd4Q8CC84 4930426I24Rik-202ENSMUST00000217797 1232 ntBASIC17.65■□□□□ 0.42
Lysmd4Q8CC84 Nudt6-201ENSMUST00000052645 1155 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Lysmd4Q8CC84 Nudt6-202ENSMUST00000099130 1070 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
Lysmd4Q8CC84 Tesmin-201ENSMUST00000025840 2234 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
Lysmd4Q8CC84 Tifa-201ENSMUST00000054483 2245 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Lysmd4Q8CC84 Cdc20-201ENSMUST00000006565 1793 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Lysmd4Q8CC84 1700003E16Rik-201ENSMUST00000032106 2020 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
Lysmd4Q8CC84 Nol9-202ENSMUST00000103197 2271 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
Lysmd4Q8CC84 St3gal3-201ENSMUST00000030263 2549 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Lysmd4Q8CC84 Nrxn2-205ENSMUST00000113462 6667 ntAPPRIS P4 TSL 1 (best) BASIC17.65■□□□□ 0.42
Lysmd4Q8CC84 AC126028.2-201ENSMUST00000228100 1833 ntBASIC17.65■□□□□ 0.42
Lysmd4Q8CC84 Thoc3-201ENSMUST00000026990 2335 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Lysmd4Q8CC84 Spg7-209ENSMUST00000149248 2896 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Lysmd4Q8CC84 Stim2-201ENSMUST00000117661 4934 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Lysmd4Q8CC84 Ap1ar-201ENSMUST00000051737 2662 ntAPPRIS P1 TSL 3 BASIC17.64■□□□□ 0.41
Lysmd4Q8CC84 Gm13238-201ENSMUST00000117655 780 ntBASIC17.64■□□□□ 0.41
Lysmd4Q8CC84 Gm5921-201ENSMUST00000075898 882 ntBASIC17.64■□□□□ 0.41
Lysmd4Q8CC84 Tmem44-204ENSMUST00000140402 2405 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Lysmd4Q8CC84 Hdhd2-206ENSMUST00000145634 1585 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
Lysmd4Q8CC84 Creb1-204ENSMUST00000185594 1569 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
Lysmd4Q8CC84 Pold2-201ENSMUST00000102922 1646 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Lysmd4Q8CC84 Sapcd2-203ENSMUST00000114293 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Lysmd4Q8CC84 Clcn4-206ENSMUST00000210594 2539 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
Lysmd4Q8CC84 Dll3-201ENSMUST00000108315 2618 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Lysmd4Q8CC84 Slc39a5-202ENSMUST00000167859 2025 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Lysmd4Q8CC84 Iars2-203ENSMUST00000110975 2801 ntTSL 5 BASIC17.63■□□□□ 0.41
Lysmd4Q8CC84 Bag5-202ENSMUST00000160576 1852 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Lysmd4Q8CC84 Atf6b-201ENSMUST00000015605 2566 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Lysmd4Q8CC84 Tfpt-204ENSMUST00000155592 1091 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
Lysmd4Q8CC84 Gm6217-201ENSMUST00000222182 829 ntAPPRIS P1 BASIC17.63■□□□□ 0.41
Lysmd4Q8CC84 Sh2b3-203ENSMUST00000118580 2393 ntAPPRIS ALT2 TSL 2 BASIC17.63■□□□□ 0.41
Lysmd4Q8CC84 Stx2-201ENSMUST00000031378 2939 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
Lysmd4Q8CC84 Mmp24-201ENSMUST00000029141 4306 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Lysmd4Q8CC84 Sfrp5-201ENSMUST00000018966 1900 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Lysmd4Q8CC84 Kdm3b-201ENSMUST00000043775 6363 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Retrieved 100 of 76,532 protein–RNA pairs in 19.6 ms