Protein–RNA interactions for Protein: Q5SX79

Shroom1, Protein Shroom1, mousemouse

Predictions only

Length 823 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shroom1Q5SX79 Ubxn2a-203ENSMUST00000142867 2146 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Shroom1Q5SX79 Lig3-204ENSMUST00000131537 1782 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Shroom1Q5SX79 Lig3-209ENSMUST00000173009 1785 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Shroom1Q5SX79 Adrm1-201ENSMUST00000061437 1535 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Shroom1Q5SX79 Dapk1-202ENSMUST00000077453 5491 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Shroom1Q5SX79 Gm26571-201ENSMUST00000181399 666 ntBASIC21.01■□□□□ 0.95
Shroom1Q5SX79 Gm27405-201ENSMUST00000184201 112 ntBASIC21.01■□□□□ 0.95
Shroom1Q5SX79 Mras-201ENSMUST00000035045 4701 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Shroom1Q5SX79 Lrp3-202ENSMUST00000122409 4147 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Shroom1Q5SX79 2410002F23Rik-201ENSMUST00000055858 1982 ntAPPRIS P2 TSL 1 (best) BASIC21.01■□□□□ 0.95
Shroom1Q5SX79 Crh-201ENSMUST00000061294 1320 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Shroom1Q5SX79 Ankrd33b-203ENSMUST00000110410 2070 ntAPPRIS P3 TSL 1 (best) BASIC21■□□□□ 0.95
Shroom1Q5SX79 Pianp-204ENSMUST00000160704 1116 ntAPPRIS P2 TSL 1 (best) BASIC21■□□□□ 0.95
Shroom1Q5SX79 Gm42642-201ENSMUST00000200683 355 ntBASIC21■□□□□ 0.95
Shroom1Q5SX79 Myadml2-201ENSMUST00000026134 931 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Shroom1Q5SX79 Nabp2-201ENSMUST00000026439 1130 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Shroom1Q5SX79 Cmc4-201ENSMUST00000033543 992 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Shroom1Q5SX79 Kremen2-201ENSMUST00000046525 2123 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Shroom1Q5SX79 Prkab1-201ENSMUST00000031486 2089 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Shroom1Q5SX79 Akt1s1-204ENSMUST00000107885 1812 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
Shroom1Q5SX79 Fbxw2-202ENSMUST00000091020 1838 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Shroom1Q5SX79 Tmem178-201ENSMUST00000025092 1696 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Shroom1Q5SX79 Zcchc2-202ENSMUST00000119166 6368 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
Shroom1Q5SX79 Gorasp2-203ENSMUST00000112205 1196 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
Shroom1Q5SX79 Bsg-205ENSMUST00000179781 1261 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Shroom1Q5SX79 Dap-205ENSMUST00000186547 535 ntTSL 3 BASIC20.99■□□□□ 0.95
Shroom1Q5SX79 Mrpl40-201ENSMUST00000023391 1185 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Shroom1Q5SX79 Pcgf6-201ENSMUST00000026032 2098 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Shroom1Q5SX79 Exosc4-201ENSMUST00000059045 1796 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Shroom1Q5SX79 Cbx4-201ENSMUST00000026665 5179 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Shroom1Q5SX79 Slc35f3-201ENSMUST00000108759 2309 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Shroom1Q5SX79 Hfe2-201ENSMUST00000049208 2028 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Shroom1Q5SX79 Ghitm-201ENSMUST00000042564 2573 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Shroom1Q5SX79 Wtap-204ENSMUST00000159986 3187 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Shroom1Q5SX79 Yy1-201ENSMUST00000021692 6178 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Shroom1Q5SX79 Bspry-201ENSMUST00000030088 1757 ntAPPRIS P2 TSL 1 (best) BASIC20.98■□□□□ 0.95
Shroom1Q5SX79 Spsb3-204ENSMUST00000119829 1955 ntAPPRIS ALT2 TSL 2 BASIC20.98■□□□□ 0.95
Shroom1Q5SX79 2310061I04Rik-203ENSMUST00000148482 1193 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Shroom1Q5SX79 Gm26571-205ENSMUST00000223215 591 ntTSL 3 BASIC20.98■□□□□ 0.95
Shroom1Q5SX79 Zfp428-201ENSMUST00000071361 1182 ntAPPRIS P3 TSL 1 (best) BASIC20.98■□□□□ 0.95
Shroom1Q5SX79 Suz12-206ENSMUST00000163272 4303 ntAPPRIS ALT2 TSL 5 BASIC20.97■□□□□ 0.95
Shroom1Q5SX79 Fah-201ENSMUST00000032865 1585 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Shroom1Q5SX79 Tinagl1-202ENSMUST00000105998 1976 ntAPPRIS P2 TSL 1 (best) BASIC20.97■□□□□ 0.95
Shroom1Q5SX79 Fam20b-201ENSMUST00000086153 4414 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Shroom1Q5SX79 Alx3-201ENSMUST00000014747 1874 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Shroom1Q5SX79 Gm11421-201ENSMUST00000122124 294 ntBASIC20.97■□□□□ 0.95
Shroom1Q5SX79 Hes3-202ENSMUST00000218045 962 ntAPPRIS ALT2 TSL 5 BASIC20.97■□□□□ 0.95
Shroom1Q5SX79 Art5-204ENSMUST00000106937 1713 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Shroom1Q5SX79 Ube2d2a-202ENSMUST00000170693 2483 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Shroom1Q5SX79 Noc2l-201ENSMUST00000179543 2785 ntAPPRIS P2 TSL 1 (best) BASIC20.96■□□□□ 0.95
Shroom1Q5SX79 Gm38165-201ENSMUST00000191654 486 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Shroom1Q5SX79 Gm42569-201ENSMUST00000200539 472 ntBASIC20.96■□□□□ 0.95
Shroom1Q5SX79 Dcbld2-201ENSMUST00000046663 6561 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Shroom1Q5SX79 Pptc7-201ENSMUST00000053426 4644 ntAPPRIS P2 TSL 1 (best) BASIC20.96■□□□□ 0.95
Shroom1Q5SX79 Gpatch3-201ENSMUST00000030662 2004 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Shroom1Q5SX79 Dmrta2-201ENSMUST00000061187 2922 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Shroom1Q5SX79 Bfsp1-201ENSMUST00000028907 2372 ntAPPRIS P3 TSL 1 (best) BASIC20.95■□□□□ 0.94
Shroom1Q5SX79 K230010J24Rik-204ENSMUST00000187868 1810 ntAPPRIS P1 TSL 5 BASIC20.95■□□□□ 0.94
Shroom1Q5SX79 Wdsub1-202ENSMUST00000102751 1526 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Shroom1Q5SX79 Ppm1b-201ENSMUST00000080217 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
Shroom1Q5SX79 Oaf-201ENSMUST00000034512 2526 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Shroom1Q5SX79 Bcl10-201ENSMUST00000029842 1949 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Shroom1Q5SX79 Bicdl2-201ENSMUST00000062967 1913 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Shroom1Q5SX79 Hck-202ENSMUST00000109799 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
Shroom1Q5SX79 Hck-203ENSMUST00000189688 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
Shroom1Q5SX79 Hck-201ENSMUST00000003370 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
Shroom1Q5SX79 Snx21-206ENSMUST00000174070 1446 ntTSL 5 BASIC20.95■□□□□ 0.94
Shroom1Q5SX79 Kifc3-201ENSMUST00000034240 3277 ntAPPRIS P4 TSL 1 (best) BASIC20.95■□□□□ 0.94
Shroom1Q5SX79 Klc3-204ENSMUST00000108459 1849 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Shroom1Q5SX79 Rnaseh2b-201ENSMUST00000022499 1494 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Shroom1Q5SX79 Htra2-203ENSMUST00000113963 1629 ntTSL 5 BASIC20.94■□□□□ 0.94
Shroom1Q5SX79 Gpx4-202ENSMUST00000105372 959 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Shroom1Q5SX79 Zbtb11os1-201ENSMUST00000186480 1350 ntBASIC20.94■□□□□ 0.94
Shroom1Q5SX79 AC161052.2-201ENSMUST00000220969 1375 ntTSL 5 BASIC20.94■□□□□ 0.94
Shroom1Q5SX79 Htra3-201ENSMUST00000087629 2750 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Shroom1Q5SX79 Mcmbp-202ENSMUST00000119081 2347 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Shroom1Q5SX79 AC123857.1-201ENSMUST00000181053 2312 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Shroom1Q5SX79 Celf6-202ENSMUST00000118164 1583 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Shroom1Q5SX79 Utp11-201ENSMUST00000030738 1603 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Shroom1Q5SX79 Hras-201ENSMUST00000026572 2828 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Shroom1Q5SX79 Sdhaf1-201ENSMUST00000098586 2490 ntAPPRIS P1 BASIC20.93■□□□□ 0.94
Shroom1Q5SX79 Sarnp-201ENSMUST00000105230 918 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Shroom1Q5SX79 Emc9-201ENSMUST00000022828 855 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Shroom1Q5SX79 Spaca1-201ENSMUST00000029927 1197 ntAPPRIS P3 TSL 1 (best) BASIC20.93■□□□□ 0.94
Shroom1Q5SX79 Spaca1-202ENSMUST00000084734 1149 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
Shroom1Q5SX79 Ubl3-202ENSMUST00000164904 2001 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Shroom1Q5SX79 Celf6-201ENSMUST00000034840 2765 ntAPPRIS P2 TSL 1 (best) BASIC20.93■□□□□ 0.94
Shroom1Q5SX79 Fbxo24-201ENSMUST00000031732 2161 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Shroom1Q5SX79 Trim33-201ENSMUST00000029444 8875 ntAPPRIS P4 TSL 1 (best) BASIC20.93■□□□□ 0.94
Shroom1Q5SX79 Bcl3-201ENSMUST00000120537 1850 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Shroom1Q5SX79 Magi3-202ENSMUST00000121198 5912 ntAPPRIS ALT2 TSL 5 BASIC20.92■□□□□ 0.94
Shroom1Q5SX79 Socs2-214ENSMUST00000172070 2153 ntAPPRIS P1 TSL 2 BASIC20.92■□□□□ 0.94
Shroom1Q5SX79 AC133650.2-201ENSMUST00000217036 607 ntTSL 3 BASIC20.92■□□□□ 0.94
Shroom1Q5SX79 Pnck-202ENSMUST00000114472 1532 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Shroom1Q5SX79 Dnajb11-205ENSMUST00000178320 1628 ntAPPRIS P1 TSL 5 BASIC20.92■□□□□ 0.94
Shroom1Q5SX79 Cblc-201ENSMUST00000043822 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Shroom1Q5SX79 Pick1-204ENSMUST00000163571 2054 ntAPPRIS P1 TSL 5 BASIC20.92■□□□□ 0.94
Shroom1Q5SX79 Trim47-201ENSMUST00000021120 2204 ntAPPRIS P4 TSL 1 (best) BASIC20.92■□□□□ 0.94
Shroom1Q5SX79 Trim3-203ENSMUST00000106791 2466 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
Shroom1Q5SX79 Snhg6-203ENSMUST00000182580 473 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
Retrieved 100 of 76,532 protein–RNA pairs in 90.1 ms