Protein–RNA interactions for Protein: Q4FK66

Prpf38a, Pre-mRNA-splicing factor 38A, mousemouse

Known RBP Predictions only

Length 312 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf38aQ4FK66 AC164629.5-201ENSMUST00000220387 632 ntBASIC23.12■■□□□ 1.29
Prpf38aQ4FK66 Faap24-201ENSMUST00000032704 1857 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
Prpf38aQ4FK66 Tmem143-201ENSMUST00000069772 2297 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
Prpf38aQ4FK66 Laptm4a-201ENSMUST00000020909 1773 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
Prpf38aQ4FK66 2700081O15Rik-202ENSMUST00000159348 4989 ntAPPRIS P1 TSL 5 BASIC23.11■■□□□ 1.29
Prpf38aQ4FK66 Gm38165-201ENSMUST00000191654 486 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
Prpf38aQ4FK66 0610010K14Rik-202ENSMUST00000021181 779 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
Prpf38aQ4FK66 Igfbp6-201ENSMUST00000023807 1112 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
Prpf38aQ4FK66 Mtfmt-201ENSMUST00000074792 2042 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
Prpf38aQ4FK66 Gpr162-201ENSMUST00000046893 2676 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
Prpf38aQ4FK66 Sec22c-202ENSMUST00000111560 2669 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
Prpf38aQ4FK66 Rab28-203ENSMUST00000201422 1697 ntTSL 5 BASIC23.1■■□□□ 1.29
Prpf38aQ4FK66 Gm10849-201ENSMUST00000100397 618 ntBASIC23.1■■□□□ 1.29
Prpf38aQ4FK66 Grifin-201ENSMUST00000042993 613 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
Prpf38aQ4FK66 Gdf15-202ENSMUST00000110103 1380 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
Prpf38aQ4FK66 Lacc1-201ENSMUST00000062789 2444 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
Prpf38aQ4FK66 D030056L22Rik-201ENSMUST00000055792 1631 ntAPPRIS P2 TSL 1 (best) BASIC23.09■■□□□ 1.29
Prpf38aQ4FK66 Gfi1-202ENSMUST00000065478 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC23.09■■□□□ 1.29
Prpf38aQ4FK66 Dtnb-216ENSMUST00000173736 2175 ntAPPRIS ALT2 TSL 5 BASIC23.09■■□□□ 1.29
Prpf38aQ4FK66 Gm27801-201ENSMUST00000184174 223 ntBASIC23.09■■□□□ 1.29
Prpf38aQ4FK66 Gm42569-201ENSMUST00000200539 472 ntBASIC23.09■■□□□ 1.29
Prpf38aQ4FK66 Ltb-201ENSMUST00000025262 1160 ntAPPRIS P2 TSL 1 (best) BASIC23.09■■□□□ 1.29
Prpf38aQ4FK66 3830408C21Rik-205ENSMUST00000225426 1898 ntBASIC23.09■■□□□ 1.29
Prpf38aQ4FK66 Matr3-209ENSMUST00000188275 1951 ntTSL 5 BASIC23.09■■□□□ 1.29
Prpf38aQ4FK66 Grin2d-203ENSMUST00000211713 5244 ntAPPRIS P1 TSL 5 BASIC23.08■■□□□ 1.29
Prpf38aQ4FK66 0610038B21Rik-202ENSMUST00000184762 1524 ntBASIC23.08■■□□□ 1.29
Prpf38aQ4FK66 Pelo-201ENSMUST00000109226 1600 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
Prpf38aQ4FK66 Gpx4-202ENSMUST00000105372 959 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
Prpf38aQ4FK66 Gm14281-201ENSMUST00000121700 1294 ntBASIC23.08■■□□□ 1.29
Prpf38aQ4FK66 Vax2os-202ENSMUST00000150233 595 ntTSL 3 BASIC23.08■■□□□ 1.29
Prpf38aQ4FK66 Hist1h2ag-201ENSMUST00000091741 485 ntAPPRIS P1 BASIC23.08■■□□□ 1.29
Prpf38aQ4FK66 AC152827.1-201ENSMUST00000221143 2189 ntBASIC23.07■■□□□ 1.28
Prpf38aQ4FK66 Brd1-203ENSMUST00000109381 4886 ntTSL 5 BASIC23.07■■□□□ 1.28
Prpf38aQ4FK66 Shisa4-201ENSMUST00000041240 1763 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
Prpf38aQ4FK66 Derl2-207ENSMUST00000171041 1466 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
Prpf38aQ4FK66 Usp39-201ENSMUST00000070345 2244 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
Prpf38aQ4FK66 Stum-202ENSMUST00000179826 601 ntAPPRIS ALT1 TSL 5 BASIC23.07■■□□□ 1.28
Prpf38aQ4FK66 Gm7291-201ENSMUST00000199147 382 ntBASIC23.07■■□□□ 1.28
Prpf38aQ4FK66 Gm42778-201ENSMUST00000199644 553 ntBASIC23.07■■□□□ 1.28
Prpf38aQ4FK66 Gm6916-201ENSMUST00000205277 828 ntTSL 3 BASIC23.07■■□□□ 1.28
Prpf38aQ4FK66 Kcnk15-202ENSMUST00000109396 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC23.07■■□□□ 1.28
Prpf38aQ4FK66 Sfmbt2-204ENSMUST00000114864 1901 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
Prpf38aQ4FK66 Yy1-201ENSMUST00000021692 6178 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
Prpf38aQ4FK66 Nfix-201ENSMUST00000076715 1403 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
Prpf38aQ4FK66 Vmn1r17-205ENSMUST00000228342 2230 ntAPPRIS P2 BASIC23.06■■□□□ 1.28
Prpf38aQ4FK66 Qk-201ENSMUST00000042296 6718 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
Prpf38aQ4FK66 Fam20b-202ENSMUST00000122424 4532 ntAPPRIS P1 TSL 5 BASIC23.06■■□□□ 1.28
Prpf38aQ4FK66 Arl5a-201ENSMUST00000036541 5239 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
Prpf38aQ4FK66 Ankrd33b-203ENSMUST00000110410 2070 ntAPPRIS P3 TSL 1 (best) BASIC23.06■■□□□ 1.28
Prpf38aQ4FK66 Arhgap23-201ENSMUST00000093940 2409 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
Prpf38aQ4FK66 Gm10033-202ENSMUST00000211874 928 ntBASIC23.06■■□□□ 1.28
Prpf38aQ4FK66 Gm36033-202ENSMUST00000214827 745 ntTSL 2 BASIC23.06■■□□□ 1.28
Prpf38aQ4FK66 Zbtb7a-202ENSMUST00000117956 1863 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
Prpf38aQ4FK66 Noa1-201ENSMUST00000047860 2288 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
Prpf38aQ4FK66 Rbfox3-206ENSMUST00000120061 2150 ntAPPRIS ALT2 TSL 5 BASIC23.06■■□□□ 1.28
Prpf38aQ4FK66 Cdkn3-203ENSMUST00000227149 1952 ntBASIC23.05■■□□□ 1.28
Prpf38aQ4FK66 Dlg3-201ENSMUST00000000901 4885 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
Prpf38aQ4FK66 Myo1b-202ENSMUST00000046390 5052 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
Prpf38aQ4FK66 Hpca-201ENSMUST00000030572 1525 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
Prpf38aQ4FK66 Kcnd3os-201ENSMUST00000130683 1091 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
Prpf38aQ4FK66 Gm27405-201ENSMUST00000184201 112 ntBASIC23.05■■□□□ 1.28
Prpf38aQ4FK66 Gm26507-201ENSMUST00000181838 1410 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
Prpf38aQ4FK66 Inhbb-201ENSMUST00000038765 4255 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
Prpf38aQ4FK66 Gm9934-201ENSMUST00000098303 2077 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
Prpf38aQ4FK66 Tsen54-201ENSMUST00000021134 1979 ntAPPRIS P2 TSL 1 (best) BASIC23.05■■□□□ 1.28
Prpf38aQ4FK66 Gm26995-201ENSMUST00000182216 1306 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
Prpf38aQ4FK66 Gm9817-201ENSMUST00000054395 2531 ntAPPRIS P1 BASIC23.04■■□□□ 1.28
Prpf38aQ4FK66 Tmem86a-201ENSMUST00000010451 1831 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
Prpf38aQ4FK66 Gpx1-202ENSMUST00000191997 787 ntTSL 2 BASIC23.04■■□□□ 1.28
Prpf38aQ4FK66 Gm18671-201ENSMUST00000214826 683 ntBASIC23.04■■□□□ 1.28
Prpf38aQ4FK66 Gm9988-201ENSMUST00000069786 435 ntBASIC23.04■■□□□ 1.28
Prpf38aQ4FK66 Gpx1-201ENSMUST00000082429 1072 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
Prpf38aQ4FK66 Uckl1os-201ENSMUST00000122831 2018 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
Prpf38aQ4FK66 Sapcd2-203ENSMUST00000114293 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC23.04■■□□□ 1.28
Prpf38aQ4FK66 Hoxa11os-201ENSMUST00000134512 1839 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
Prpf38aQ4FK66 Gm15043-201ENSMUST00000118843 1543 ntBASIC23.03■■□□□ 1.28
Prpf38aQ4FK66 6430573P05Rik-203ENSMUST00000195547 2457 ntBASIC23.03■■□□□ 1.28
Prpf38aQ4FK66 Rras-201ENSMUST00000044111 995 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
Prpf38aQ4FK66 Usp2-202ENSMUST00000065461 2057 ntAPPRIS P2 TSL 1 (best) BASIC23.03■■□□□ 1.28
Prpf38aQ4FK66 Olig1-201ENSMUST00000056882 2162 ntAPPRIS P1 BASIC23.03■■□□□ 1.28
Prpf38aQ4FK66 Nfkbid-203ENSMUST00000108176 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC23.03■■□□□ 1.28
Prpf38aQ4FK66 Memo1-201ENSMUST00000078459 1513 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
Prpf38aQ4FK66 Zfp523-201ENSMUST00000002318 2710 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
Prpf38aQ4FK66 Gm12660-201ENSMUST00000123764 664 ntTSL 3 BASIC23.02■■□□□ 1.28
Prpf38aQ4FK66 Mettl26-205ENSMUST00000169308 1026 ntTSL 2 BASIC23.02■■□□□ 1.28
Prpf38aQ4FK66 Gm11175-202ENSMUST00000211380 408 ntTSL 3 BASIC23.02■■□□□ 1.28
Prpf38aQ4FK66 Magi2-201ENSMUST00000088516 4843 ntAPPRIS P2 TSL 5 BASIC23.02■■□□□ 1.28
Prpf38aQ4FK66 Ctdsp1-201ENSMUST00000027367 2876 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
Prpf38aQ4FK66 Ccdc84-201ENSMUST00000053286 1725 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
Prpf38aQ4FK66 Tfdp2-202ENSMUST00000165120 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC23.02■■□□□ 1.28
Prpf38aQ4FK66 Suz12-206ENSMUST00000163272 4303 ntAPPRIS ALT2 TSL 5 BASIC23.01■■□□□ 1.27
Prpf38aQ4FK66 Ewsr1-205ENSMUST00000102930 2174 ntAPPRIS ALT2 TSL 5 BASIC23.01■■□□□ 1.27
Prpf38aQ4FK66 Rab7-205ENSMUST00000113600 2159 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
Prpf38aQ4FK66 Aebp2-203ENSMUST00000095350 2575 ntAPPRIS ALT2 TSL 1 (best) BASIC23.01■■□□□ 1.27
Prpf38aQ4FK66 Exoc3l2-201ENSMUST00000011407 2200 ntTSL 5 BASIC23.01■■□□□ 1.27
Prpf38aQ4FK66 Gm38399-201ENSMUST00000112103 1645 ntTSL 2 BASIC23.01■■□□□ 1.27
Prpf38aQ4FK66 Zfp598-201ENSMUST00000047179 3286 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
Prpf38aQ4FK66 Tfap2e-201ENSMUST00000048194 2085 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
Prpf38aQ4FK66 Gorasp2-203ENSMUST00000112205 1196 ntAPPRIS ALT2 TSL 1 (best) BASIC23.01■■□□□ 1.27
Prpf38aQ4FK66 Zcrb1-208ENSMUST00000162160 850 ntAPPRIS ALT1 TSL 1 (best) BASIC23.01■■□□□ 1.27
Retrieved 100 of 76,532 protein–RNA pairs in 59.4 ms