Protein–RNA interactions for Protein: P51670

Ccl9, C-C motif chemokine 9, mousemouse

Predictions only

Length 122 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccl9P51670 Oaz1-201ENSMUST00000060987 1071 ntAPPRIS ALT1 TSL 5 BASIC17.27■□□□□ 0.36
Ccl9P51670 Art1-201ENSMUST00000033300 1425 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Ccl9P51670 Gyg-201ENSMUST00000118015 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.35
Ccl9P51670 Gls-202ENSMUST00000114510 5596 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.35
Ccl9P51670 A030001D20Rik-201ENSMUST00000211533 1542 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Ccl9P51670 Sc5d-202ENSMUST00000169609 1677 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Ccl9P51670 Mark2-206ENSMUST00000164205 3104 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Ccl9P51670 Bcas2-201ENSMUST00000005830 1467 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Ccl9P51670 Zfp653-201ENSMUST00000043922 2108 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
Ccl9P51670 Klhl32-201ENSMUST00000084781 2287 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Ccl9P51670 Laptm4a-201ENSMUST00000020909 1773 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Ccl9P51670 Brpf3-201ENSMUST00000004985 5766 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Ccl9P51670 5930403N24Rik-204ENSMUST00000217338 337 ntTSL 2 BASIC17.26■□□□□ 0.35
Ccl9P51670 C1qc-201ENSMUST00000046332 1203 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Ccl9P51670 Gm9870-201ENSMUST00000063874 645 ntBASIC17.26■□□□□ 0.35
Ccl9P51670 Zfyve9-202ENSMUST00000106657 6459 ntAPPRIS P2 TSL 5 BASIC17.26■□□□□ 0.35
Ccl9P51670 Lrig1-202ENSMUST00000101126 4951 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Ccl9P51670 Rnpep-201ENSMUST00000074357 2171 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Ccl9P51670 Ncoa5-202ENSMUST00000121377 2930 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Ccl9P51670 Rab28-203ENSMUST00000201422 1697 ntTSL 5 BASIC17.26■□□□□ 0.35
Ccl9P51670 Hsf1-204ENSMUST00000226872 2104 ntBASIC17.26■□□□□ 0.35
Ccl9P51670 Ddost-201ENSMUST00000030538 2120 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Ccl9P51670 Dnajb11-201ENSMUST00000004574 1927 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Ccl9P51670 Cpsf4-202ENSMUST00000160422 1756 ntAPPRIS ALT1 TSL 5 BASIC17.25■□□□□ 0.35
Ccl9P51670 Rell2-212ENSMUST00000177058 1762 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
Ccl9P51670 Psmd11-214ENSMUST00000173938 1626 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Ccl9P51670 Gm14117-201ENSMUST00000122417 843 ntBASIC17.25■□□□□ 0.35
Ccl9P51670 Anp32e-210ENSMUST00000171368 878 ntTSL 3 BASIC17.25■□□□□ 0.35
Ccl9P51670 1700097N02Rik-201ENSMUST00000188852 845 ntTSL 3 BASIC17.25■□□□□ 0.35
Ccl9P51670 Fam89b-201ENSMUST00000099955 1197 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Ccl9P51670 Nexmif-201ENSMUST00000056502 5211 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Ccl9P51670 Ung-201ENSMUST00000031587 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Ccl9P51670 Msx1-201ENSMUST00000063116 1935 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Ccl9P51670 Xk-201ENSMUST00000015486 5076 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Ccl9P51670 Slc25a3-203ENSMUST00000164505 1483 ntAPPRIS P2 TSL 5 BASIC17.24■□□□□ 0.35
Ccl9P51670 Gm26837-201ENSMUST00000180821 2110 ntTSL 5 BASIC17.24■□□□□ 0.35
Ccl9P51670 Kcnn4-201ENSMUST00000171904 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Ccl9P51670 Sybu-208ENSMUST00000228057 3026 ntAPPRIS ALT2 BASIC17.24■□□□□ 0.35
Ccl9P51670 Pbx1-206ENSMUST00000176790 1828 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Ccl9P51670 Enah-203ENSMUST00000111025 3385 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
Ccl9P51670 Acvrl1-206ENSMUST00000121718 1906 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Ccl9P51670 Kras-202ENSMUST00000111710 1194 ntTSL 5 BASIC17.24■□□□□ 0.35
Ccl9P51670 Flot2-203ENSMUST00000100784 2699 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Ccl9P51670 Uckl1os-201ENSMUST00000122831 2018 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Ccl9P51670 Baz1a-201ENSMUST00000038926 6188 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
Ccl9P51670 Syt5-201ENSMUST00000065957 1750 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Ccl9P51670 A930012O16Rik-202ENSMUST00000156418 1541 ntTSL 2 BASIC17.23■□□□□ 0.35
Ccl9P51670 Tmem230-206ENSMUST00000180286 1531 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
Ccl9P51670 Cradd-205ENSMUST00000220279 1613 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Ccl9P51670 Bex4-201ENSMUST00000116527 837 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Ccl9P51670 Yjefn3-202ENSMUST00000152938 785 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
Ccl9P51670 Gm46212-201ENSMUST00000220256 1003 ntTSL 5 BASIC17.23■□□□□ 0.35
Ccl9P51670 Cuta-201ENSMUST00000025027 639 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
Ccl9P51670 Pafah1b1-201ENSMUST00000021091 5803 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Ccl9P51670 Gm15441-202ENSMUST00000107095 1653 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Ccl9P51670 Gnas-206ENSMUST00000109084 1695 ntAPPRIS ALT1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Ccl9P51670 Stk35-201ENSMUST00000165413 2882 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Ccl9P51670 Srm-201ENSMUST00000006611 1338 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Ccl9P51670 Mrpl38-201ENSMUST00000106439 1411 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Ccl9P51670 Clta-204ENSMUST00000107849 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Ccl9P51670 Gm9725-202ENSMUST00000166229 2326 ntTSL 5 BASIC17.22■□□□□ 0.35
Ccl9P51670 Rbm7-201ENSMUST00000170000 1773 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Ccl9P51670 Siah1b-201ENSMUST00000037928 1783 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Ccl9P51670 Zfp523-202ENSMUST00000073534 2654 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
Ccl9P51670 Arid1b-201ENSMUST00000092723 7150 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
Ccl9P51670 Ankrd9-207ENSMUST00000148765 1431 ntAPPRIS P2 TSL 2 BASIC17.21■□□□□ 0.35
Ccl9P51670 Oxsr1-201ENSMUST00000040853 4647 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Ccl9P51670 Ankrd11-207ENSMUST00000212937 943 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Ccl9P51670 Pgp-201ENSMUST00000053024 1027 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Ccl9P51670 Acbd6-203ENSMUST00000097529 1255 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Ccl9P51670 Kndc1-202ENSMUST00000121839 2210 ntTSL 2 BASIC17.21■□□□□ 0.35
Ccl9P51670 Fdxacb1-203ENSMUST00000176335 1817 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Ccl9P51670 Scamp3-202ENSMUST00000098941 1338 ntTSL 1 (best) BASIC17.21■□□□□ 0.34
Ccl9P51670 Zmym3-202ENSMUST00000117637 1593 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Ccl9P51670 Naa30-205ENSMUST00000153488 4446 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Ccl9P51670 Dtx4-201ENSMUST00000045521 5765 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Ccl9P51670 Stx2-201ENSMUST00000031378 2939 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
Ccl9P51670 Gm22238-201ENSMUST00000175222 88 ntBASIC17.2■□□□□ 0.34
Ccl9P51670 Sec61a2-201ENSMUST00000026926 756 ntTSL 5 BASIC17.2■□□□□ 0.34
Ccl9P51670 Alyref2-201ENSMUST00000081527 1273 ntAPPRIS P1 BASIC17.2■□□□□ 0.34
Ccl9P51670 Bend7-204ENSMUST00000184139 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Ccl9P51670 Foxj2-201ENSMUST00000003238 5283 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Ccl9P51670 Xkr4-201ENSMUST00000070533 3634 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Ccl9P51670 Lmo2-208ENSMUST00000170926 1529 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
Ccl9P51670 Stoml2-201ENSMUST00000030169 1874 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Ccl9P51670 AC166356.1-201ENSMUST00000228236 1426 ntBASIC17.2■□□□□ 0.34
Ccl9P51670 Rhod-201ENSMUST00000048197 1344 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Ccl9P51670 Kcnn4-202ENSMUST00000205428 1945 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Ccl9P51670 Lig3-204ENSMUST00000131537 1782 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Ccl9P51670 Lig3-209ENSMUST00000173009 1785 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Ccl9P51670 Sfmbt2-204ENSMUST00000114864 1901 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Ccl9P51670 Arfrp1-203ENSMUST00000127988 2447 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Ccl9P51670 Rab3il1-201ENSMUST00000113161 2225 ntAPPRIS P3 TSL 5 BASIC17.19■□□□□ 0.34
Ccl9P51670 Cers2-201ENSMUST00000015858 2216 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Ccl9P51670 Bag5-202ENSMUST00000160576 1852 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Ccl9P51670 Sept7-202ENSMUST00000165594 2516 ntAPPRIS P2 TSL 5 BASIC17.18■□□□□ 0.34
Ccl9P51670 Ier3ip1-201ENSMUST00000026487 1395 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Ccl9P51670 Tfdp2-202ENSMUST00000165120 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Ccl9P51670 Luc7l2-201ENSMUST00000057692 2702 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Ccl9P51670 Gm28417-201ENSMUST00000185218 785 ntTSL 3 BASIC17.18■□□□□ 0.34
Retrieved 100 of 76,532 protein–RNA pairs in 36.6 ms