Protein–RNA interactions for Protein: P35546

Ret, Proto-oncogene tyrosine-protein kinase receptor Ret, mousemouse

Predictions only

Length 1,115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RetP35546 Bag1-202ENSMUST00000108089 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
RetP35546 Barhl1-203ENSMUST00000113849 2102 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
RetP35546 Pus1-203ENSMUST00000086643 1868 ntAPPRIS P4 TSL 1 (best) BASIC18.46■□□□□ 0.54
RetP35546 Hira-201ENSMUST00000004222 4218 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
RetP35546 Gorasp2-203ENSMUST00000112205 1196 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
RetP35546 Rasgrp2-206ENSMUST00000113472 2124 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
RetP35546 Gm6569-201ENSMUST00000154520 811 ntAPPRIS P1 TSL 3 BASIC18.45■□□□□ 0.54
RetP35546 Ubxn1-202ENSMUST00000166407 1032 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
RetP35546 AC158777.2-201ENSMUST00000228787 398 ntAPPRIS P1 BASIC18.45■□□□□ 0.54
RetP35546 Cox14-201ENSMUST00000023761 723 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
RetP35546 Magi2-202ENSMUST00000101558 6530 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
RetP35546 AC123857.1-201ENSMUST00000181053 2312 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
RetP35546 Ppm1b-201ENSMUST00000080217 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
RetP35546 Ankrd33b-202ENSMUST00000076942 1641 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
RetP35546 4930507D05Rik-201ENSMUST00000181110 1834 ntAPPRIS P1 BASIC18.44■□□□□ 0.54
RetP35546 Gm572-201ENSMUST00000105698 1385 ntAPPRIS P1 TSL 5 BASIC18.44■□□□□ 0.54
RetP35546 Kif27-203ENSMUST00000225388 5121 ntAPPRIS P1 BASIC18.44■□□□□ 0.54
RetP35546 Art5-204ENSMUST00000106937 1713 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
RetP35546 1700030C10Rik-203ENSMUST00000189625 1735 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
RetP35546 Gm9828-202ENSMUST00000126622 1446 ntTSL 3 BASIC18.44■□□□□ 0.54
RetP35546 Gm2464-202ENSMUST00000194841 877 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
RetP35546 Krt8-ps-201ENSMUST00000208495 945 ntBASIC18.44■□□□□ 0.54
RetP35546 Gm36033-202ENSMUST00000214827 745 ntTSL 2 BASIC18.44■□□□□ 0.54
RetP35546 Rtn4rl2-201ENSMUST00000054514 1263 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
RetP35546 Dtd2-202ENSMUST00000085404 1012 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
RetP35546 Ccnd3-218ENSMUST00000183177 2060 ntAPPRIS P1 TSL 5 BASIC18.44■□□□□ 0.54
RetP35546 Mmp24-201ENSMUST00000029141 4306 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
RetP35546 P2ry2-202ENSMUST00000178340 2137 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
RetP35546 Rab5c-201ENSMUST00000019317 1967 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
RetP35546 Gm15441-202ENSMUST00000107095 1653 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
RetP35546 Acot3-203ENSMUST00000223080 1545 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
RetP35546 Cryzl1-203ENSMUST00000117644 1727 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
RetP35546 Ccdc34-201ENSMUST00000028580 2070 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
RetP35546 Ghitm-201ENSMUST00000042564 2573 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
RetP35546 Cacnb1-203ENSMUST00000103144 2236 ntTSL 5 BASIC18.43■□□□□ 0.54
RetP35546 Uqcrc1-201ENSMUST00000026743 1653 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
RetP35546 Socs2-213ENSMUST00000170690 2195 ntAPPRIS P1 TSL 3 BASIC18.42■□□□□ 0.54
RetP35546 Inpp5a-203ENSMUST00000106098 2826 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
RetP35546 Arhgap23-201ENSMUST00000093940 2409 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
RetP35546 Dgcr6-209ENSMUST00000155387 1415 ntTSL 3 BASIC18.42■□□□□ 0.54
RetP35546 Rasa1-201ENSMUST00000109552 4563 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
RetP35546 AA543186-201ENSMUST00000180841 1696 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
RetP35546 6330403K07Rik-201ENSMUST00000156068 1494 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
RetP35546 Srp19-202ENSMUST00000119329 613 ntTSL 2 BASIC18.42■□□□□ 0.54
RetP35546 Gm20421-201ENSMUST00000153344 672 ntTSL 3 BASIC18.42■□□□□ 0.54
RetP35546 6230400D17Rik-202ENSMUST00000224976 1019 ntBASIC18.42■□□□□ 0.54
RetP35546 Dusp26-201ENSMUST00000036631 1938 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
RetP35546 Tedc1-201ENSMUST00000049271 2441 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
RetP35546 Oaf-201ENSMUST00000034512 2526 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
RetP35546 Nrxn2-205ENSMUST00000113462 6667 ntAPPRIS P4 TSL 1 (best) BASIC18.42■□□□□ 0.54
RetP35546 Rem2-202ENSMUST00000164766 1884 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
RetP35546 Prkar1b-201ENSMUST00000026973 2637 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
RetP35546 D11Wsu47e-201ENSMUST00000042227 2196 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
RetP35546 Gramd1a-202ENSMUST00000085636 2543 ntAPPRIS ALT2 TSL 5 BASIC18.41■□□□□ 0.54
RetP35546 Sys1-202ENSMUST00000109352 2001 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
RetP35546 Tarbp2-202ENSMUST00000100168 1278 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
RetP35546 Fbxl21-202ENSMUST00000121095 798 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
RetP35546 Cuta-201ENSMUST00000025027 639 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
RetP35546 Usp2-202ENSMUST00000065461 2057 ntAPPRIS P2 TSL 1 (best) BASIC18.41■□□□□ 0.54
RetP35546 Tpst2-201ENSMUST00000031287 1835 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
RetP35546 Bola3-207ENSMUST00000136501 2312 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
RetP35546 Gm15043-201ENSMUST00000118843 1543 ntBASIC18.4■□□□□ 0.54
RetP35546 Stmn4-203ENSMUST00000120229 1281 ntTSL 2 BASIC18.4■□□□□ 0.54
RetP35546 Gm8770-201ENSMUST00000121113 1109 ntBASIC18.4■□□□□ 0.54
RetP35546 Gm10657-201ENSMUST00000193528 1031 ntBASIC18.4■□□□□ 0.54
RetP35546 Gm43759-201ENSMUST00000196925 1261 ntBASIC18.4■□□□□ 0.54
RetP35546 Gm7143-201ENSMUST00000222811 859 ntBASIC18.4■□□□□ 0.54
RetP35546 Irx2-201ENSMUST00000074372 2625 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
RetP35546 Kazald1-201ENSMUST00000026234 1380 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
RetP35546 Eif3j2-201ENSMUST00000057110 2379 ntAPPRIS P1 BASIC18.39■□□□□ 0.53
RetP35546 Mtfr1l-201ENSMUST00000102550 2025 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
RetP35546 Sarnp-201ENSMUST00000105230 918 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
RetP35546 Aktip-201ENSMUST00000109609 1171 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
RetP35546 Gon7-201ENSMUST00000173969 1152 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
RetP35546 Gm27027-201ENSMUST00000183110 547 ntAPPRIS P1 TSL 3 BASIC18.39■□□□□ 0.53
RetP35546 Krtap5-4-201ENSMUST00000061403 1046 ntAPPRIS P1 BASIC18.39■□□□□ 0.53
RetP35546 Arhgap23-202ENSMUST00000107601 5450 ntTSL 5 BASIC18.39■□□□□ 0.53
RetP35546 C2cd4a-201ENSMUST00000054500 1395 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
RetP35546 Dus1l-203ENSMUST00000106135 1863 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.53
RetP35546 Adrb1-201ENSMUST00000038949 2491 ntAPPRIS P1 BASIC18.39■□□□□ 0.53
RetP35546 Doc2a-201ENSMUST00000064110 2538 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
RetP35546 4930524B15Rik-201ENSMUST00000102829 2000 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
RetP35546 Cdk13-201ENSMUST00000042365 5202 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
RetP35546 Kalrn-208ENSMUST00000114961 6128 ntTSL 5 BASIC18.38■□□□□ 0.53
RetP35546 Syt5-201ENSMUST00000065957 1750 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
RetP35546 Rpusd3-204ENSMUST00000129047 1045 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
RetP35546 Gm15867-201ENSMUST00000159407 388 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
RetP35546 Gm7291-201ENSMUST00000199147 382 ntBASIC18.38■□□□□ 0.53
RetP35546 Arv1-201ENSMUST00000034463 1165 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
RetP35546 Rpusd3-201ENSMUST00000060634 1224 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
RetP35546 Hyi-201ENSMUST00000006562 910 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
RetP35546 Desi2-204ENSMUST00000161075 2590 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
RetP35546 Stn1-201ENSMUST00000049369 1992 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
RetP35546 Slc12a2-201ENSMUST00000115366 6520 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
RetP35546 Phox2b-201ENSMUST00000012664 3013 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
RetP35546 Vgf-202ENSMUST00000186451 2277 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
RetP35546 A030001D20Rik-201ENSMUST00000211533 1542 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
RetP35546 Tmem79-202ENSMUST00000107552 2063 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
RetP35546 Vmn1r17-205ENSMUST00000228342 2230 ntAPPRIS P2 BASIC18.37■□□□□ 0.53
RetP35546 Map3k21-201ENSMUST00000034316 5693 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Retrieved 100 of 76,532 protein–RNA pairs in 31.3 ms