Protein–RNA interactions for Protein: P09026

Hoxb3, Homeobox protein Hox-B3, mousemouse

Predictions only

Length 433 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxb3P09026 Tusc3-203ENSMUST00000209440 1535 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Hoxb3P09026 Rassf7-201ENSMUST00000046890 1525 ntAPPRIS P2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Hoxb3P09026 Gtpbp2-201ENSMUST00000024748 2966 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Hoxb3P09026 Hacd1-203ENSMUST00000114753 993 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Hoxb3P09026 9130019P16Rik-201ENSMUST00000135612 1019 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Hoxb3P09026 1700003N22Rik-201ENSMUST00000194834 808 ntBASIC19.67■□□□□ 0.74
Hoxb3P09026 Ache-209ENSMUST00000196208 1911 ntTSL 5 BASIC19.66■□□□□ 0.74
Hoxb3P09026 Trim9-208ENSMUST00000221370 2393 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Hoxb3P09026 Sult4a1-201ENSMUST00000082365 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Hoxb3P09026 Thoc6-201ENSMUST00000047436 1504 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Hoxb3P09026 Slc10a3-201ENSMUST00000037967 2023 ntAPPRIS P2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Hoxb3P09026 Has1-201ENSMUST00000003762 2090 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Hoxb3P09026 Acss2-203ENSMUST00000103142 2145 ntTSL 5 BASIC19.66■□□□□ 0.74
Hoxb3P09026 Josd2-204ENSMUST00000118628 864 ntAPPRIS P1 TSL 2 BASIC19.66■□□□□ 0.74
Hoxb3P09026 Gm13063-201ENSMUST00000132247 669 ntTSL 3 BASIC19.66■□□□□ 0.74
Hoxb3P09026 Crnde-206ENSMUST00000179421 773 ntTSL 3 BASIC19.66■□□□□ 0.74
Hoxb3P09026 Plac9b-203ENSMUST00000184142 1040 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Hoxb3P09026 Stard3nl-208ENSMUST00000200323 1128 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Hoxb3P09026 Ntsr2-202ENSMUST00000220892 846 ntTSL 3 BASIC19.66■□□□□ 0.74
Hoxb3P09026 Josd2-201ENSMUST00000035844 930 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Hoxb3P09026 Nkpd1-203ENSMUST00000214205 2309 ntAPPRIS ALT2 TSL 5 BASIC19.66■□□□□ 0.74
Hoxb3P09026 9130024F11Rik-201ENSMUST00000135238 1300 ntTSL 2 BASIC19.66■□□□□ 0.74
Hoxb3P09026 Stmn4-201ENSMUST00000074523 1303 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Hoxb3P09026 Deptor-203ENSMUST00000100660 1377 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Hoxb3P09026 Barhl1-203ENSMUST00000113849 2102 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Hoxb3P09026 Atp6v1b1-206ENSMUST00000206911 1591 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Hoxb3P09026 Gsx1-201ENSMUST00000065382 1773 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Hoxb3P09026 Zbtb7a-203ENSMUST00000119606 1841 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Hoxb3P09026 Lzts2-202ENSMUST00000178087 2773 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Hoxb3P09026 Tmem203-201ENSMUST00000104998 854 ntAPPRIS P1 BASIC19.65■□□□□ 0.74
Hoxb3P09026 Anapc1-202ENSMUST00000110332 1214 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Hoxb3P09026 1110065P20Rik-203ENSMUST00000137769 659 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Hoxb3P09026 Zfp560-202ENSMUST00000143992 608 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Hoxb3P09026 1110065P20Rik-204ENSMUST00000163946 762 ntTSL 2 BASIC19.65■□□□□ 0.74
Hoxb3P09026 Mir6236-201ENSMUST00000184437 123 ntBASIC19.65■□□□□ 0.74
Hoxb3P09026 Rhob-201ENSMUST00000067384 2349 ntAPPRIS P1 BASIC19.65■□□□□ 0.74
Hoxb3P09026 Nfix-201ENSMUST00000076715 1403 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Hoxb3P09026 Thegl-202ENSMUST00000117880 1641 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Hoxb3P09026 Fance-202ENSMUST00000114801 1751 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Hoxb3P09026 Ypel1-201ENSMUST00000035682 3322 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
Hoxb3P09026 Cnp-201ENSMUST00000103120 2357 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
Hoxb3P09026 1700023F06Rik-202ENSMUST00000107026 1127 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
Hoxb3P09026 Cnpy3-202ENSMUST00000121671 561 ntTSL 2 BASIC19.64■□□□□ 0.73
Hoxb3P09026 1700101I19Rik-202ENSMUST00000186712 510 ntBASIC19.64■□□□□ 0.73
Hoxb3P09026 Sh3gl1-201ENSMUST00000003268 2072 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Hoxb3P09026 Lsm12-201ENSMUST00000021297 2256 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Hoxb3P09026 Rsrc1-202ENSMUST00000065047 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
Hoxb3P09026 Gm20634-201ENSMUST00000090779 2956 ntBASIC19.64■□□□□ 0.73
Hoxb3P09026 Ctnnd2-201ENSMUST00000081728 5944 ntAPPRIS P2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Hoxb3P09026 Gpr137-204ENSMUST00000099782 1742 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Hoxb3P09026 Dtymk-202ENSMUST00000112890 1055 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Hoxb3P09026 Art5-201ENSMUST00000094128 1518 ntAPPRIS P1 TSL 2 BASIC19.62■□□□□ 0.73
Hoxb3P09026 Tmem222-201ENSMUST00000105907 1484 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Hoxb3P09026 Gm26617-201ENSMUST00000180381 4429 ntTSL 3 BASIC19.62■□□□□ 0.73
Hoxb3P09026 Htatip2-202ENSMUST00000207895 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Hoxb3P09026 Crh-201ENSMUST00000061294 1320 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Hoxb3P09026 Gm11627-201ENSMUST00000107080 585 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Hoxb3P09026 A730056A06Rik-202ENSMUST00000206959 526 ntTSL 3 BASIC19.62■□□□□ 0.73
Hoxb3P09026 Cmc4-201ENSMUST00000033543 992 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Hoxb3P09026 Cisd1-201ENSMUST00000045887 1084 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Hoxb3P09026 Rps23-201ENSMUST00000051955 937 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Hoxb3P09026 Gm10306-201ENSMUST00000094969 533 ntAPPRIS P1 BASIC19.62■□□□□ 0.73
Hoxb3P09026 Bicdl2-201ENSMUST00000062967 1913 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Hoxb3P09026 Kif1bp-201ENSMUST00000065887 2472 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Hoxb3P09026 Tmem178-201ENSMUST00000025092 1696 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Hoxb3P09026 Rce1-201ENSMUST00000025823 1402 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Hoxb3P09026 Zfp64-202ENSMUST00000109161 1009 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Hoxb3P09026 Fam98c-203ENSMUST00000134176 1189 ntTSL 2 BASIC19.61■□□□□ 0.73
Hoxb3P09026 Arl4aos-201ENSMUST00000135883 748 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Hoxb3P09026 Specc1-215ENSMUST00000202744 674 ntTSL 3 BASIC19.61■□□□□ 0.73
Hoxb3P09026 AC175538.2-202ENSMUST00000224997 1057 ntAPPRIS P1 BASIC19.61■□□□□ 0.73
Hoxb3P09026 Igfbp6-201ENSMUST00000023807 1112 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Hoxb3P09026 Kcnj12-202ENSMUST00000089184 2291 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
Hoxb3P09026 Prdm13-201ENSMUST00000076206 2993 ntAPPRIS ALT2 TSL 2 BASIC19.61■□□□□ 0.73
Hoxb3P09026 Cdx1-201ENSMUST00000025521 1750 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Hoxb3P09026 Bspry-201ENSMUST00000030088 1757 ntAPPRIS P2 TSL 1 (best) BASIC19.6■□□□□ 0.73
Hoxb3P09026 Atg3-201ENSMUST00000023343 2057 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Hoxb3P09026 Gmcl1-202ENSMUST00000113679 960 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Hoxb3P09026 1700025A08Rik-201ENSMUST00000200753 609 ntBASIC19.6■□□□□ 0.73
Hoxb3P09026 Rpl13-201ENSMUST00000000756 780 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Hoxb3P09026 Gm37711-201ENSMUST00000194907 1749 ntTSL 5 BASIC19.59■□□□□ 0.73
Hoxb3P09026 Serbp1-207ENSMUST00000203436 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
Hoxb3P09026 Cblc-201ENSMUST00000043822 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Hoxb3P09026 Bcl11b-202ENSMUST00000109887 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
Hoxb3P09026 Cep78-201ENSMUST00000047704 2548 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Hoxb3P09026 Gm12504-201ENSMUST00000120860 2231 ntBASIC19.59■□□□□ 0.73
Hoxb3P09026 Gm5901-201ENSMUST00000106805 1140 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
Hoxb3P09026 Tnnt2-202ENSMUST00000112085 1076 ntAPPRIS ALT2 TSL 5 BASIC19.59■□□□□ 0.73
Hoxb3P09026 Tnnt2-203ENSMUST00000112086 1094 ntAPPRIS ALT2 TSL 5 BASIC19.59■□□□□ 0.73
Hoxb3P09026 Tnnt2-204ENSMUST00000112087 1112 ntAPPRIS ALT2 TSL 5 BASIC19.59■□□□□ 0.73
Hoxb3P09026 Serf1-205ENSMUST00000152286 465 ntTSL 3 BASIC19.59■□□□□ 0.73
Hoxb3P09026 A730015C16Rik-201ENSMUST00000164855 1221 ntAPPRIS P1 BASIC19.59■□□□□ 0.73
Hoxb3P09026 Tnnt2-206ENSMUST00000178854 1076 ntAPPRIS ALT2 TSL 5 BASIC19.59■□□□□ 0.73
Hoxb3P09026 Tnnt2-211ENSMUST00000189355 1112 ntAPPRIS ALT2 TSL 5 BASIC19.59■□□□□ 0.73
Hoxb3P09026 Tnnt2-212ENSMUST00000189732 1123 ntAPPRIS ALT2 TSL 5 BASIC19.59■□□□□ 0.73
Hoxb3P09026 AC114678.1-201ENSMUST00000219640 622 ntTSL 3 BASIC19.59■□□□□ 0.73
Hoxb3P09026 Fgf8-202ENSMUST00000026241 1168 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Hoxb3P09026 Nabp2-201ENSMUST00000026439 1130 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Hoxb3P09026 Tnnt2-201ENSMUST00000027671 1064 ntAPPRIS ALT2 TSL 5 BASIC19.59■□□□□ 0.73
Hoxb3P09026 Pi4kb-207ENSMUST00000167008 1962 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Retrieved 100 of 76,532 protein–RNA pairs in 118.8 ms