Protein–RNA interactions for Protein: E9PZP8

Herc1, HECT and RLD domain-containing E3 ubiquitin protein ligase family member 1, mousemouse

Predictions only

Length 4,859 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Herc1E9PZP8 Dcaf15-201ENSMUST00000041367 2312 ntTSL 1 (best) BASIC11.4□□□□□ -0.59
Herc1E9PZP8 Stac3-201ENSMUST00000035839 1790 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.59
Herc1E9PZP8 Gm13534-201ENSMUST00000121169 513 ntBASIC11.4□□□□□ -0.59
Herc1E9PZP8 Zfpl1-201ENSMUST00000025707 1287 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.59
Herc1E9PZP8 Rex1bd-201ENSMUST00000075175 671 ntAPPRIS P2 TSL 1 (best) BASIC11.4□□□□□ -0.59
Herc1E9PZP8 Evi5l-209ENSMUST00000177053 1542 ntAPPRIS P3 TSL 1 (best) BASIC11.39□□□□□ -0.59
Herc1E9PZP8 4933440N22Rik-202ENSMUST00000204444 1952 ntBASIC11.39□□□□□ -0.59
Herc1E9PZP8 H2-Eb1-201ENSMUST00000074557 1184 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Herc1E9PZP8 Memo1-201ENSMUST00000078459 1513 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Herc1E9PZP8 Dtnb-203ENSMUST00000164578 2355 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Herc1E9PZP8 Snx7-201ENSMUST00000029639 2021 ntAPPRIS P2 TSL 1 (best) BASIC11.39□□□□□ -0.59
Herc1E9PZP8 Alas2-201ENSMUST00000066337 2037 ntAPPRIS P3 TSL 1 (best) BASIC11.39□□□□□ -0.59
Herc1E9PZP8 Tifa-202ENSMUST00000163775 1646 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Herc1E9PZP8 Ndufb11-201ENSMUST00000116621 908 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Herc1E9PZP8 Zfp513-202ENSMUST00000114590 2228 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Herc1E9PZP8 Fam181a-201ENSMUST00000179363 1406 ntAPPRIS P1 TSL 2 BASIC11.39□□□□□ -0.59
Herc1E9PZP8 Fam181a-203ENSMUST00000191218 1419 ntAPPRIS P1 TSL 5 BASIC11.39□□□□□ -0.59
Herc1E9PZP8 Doc2g-201ENSMUST00000025806 1446 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Herc1E9PZP8 2510002D24Rik-204ENSMUST00000191388 995 ntTSL 5 BASIC11.38□□□□□ -0.59
Herc1E9PZP8 Hist2h2aa2-201ENSMUST00000074976 528 ntAPPRIS P1 BASIC11.38□□□□□ -0.59
Herc1E9PZP8 Nisch-222ENSMUST00000172142 2780 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Herc1E9PZP8 Cacnb1-205ENSMUST00000107562 1745 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Herc1E9PZP8 Gm11973-203ENSMUST00000155498 867 ntTSL 3 BASIC11.38□□□□□ -0.59
Herc1E9PZP8 Psme2-208ENSMUST00000161807 962 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Herc1E9PZP8 Gadd45b-203ENSMUST00000220246 732 ntTSL 2 BASIC11.38□□□□□ -0.59
Herc1E9PZP8 Pop5-201ENSMUST00000081497 1025 ntAPPRIS P1 TSL 5 BASIC11.38□□□□□ -0.59
Herc1E9PZP8 Coro7-202ENSMUST00000090480 1147 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Herc1E9PZP8 Dbndd2-202ENSMUST00000069385 1658 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Herc1E9PZP8 Zpbp2-202ENSMUST00000081033 1300 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Herc1E9PZP8 Pth1r-202ENSMUST00000166716 2219 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Herc1E9PZP8 Smpdl3a-201ENSMUST00000020022 1961 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Herc1E9PZP8 Tmem121-201ENSMUST00000058491 1574 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Herc1E9PZP8 Prickle4-201ENSMUST00000113299 990 ntTSL 5 BASIC11.38□□□□□ -0.59
Herc1E9PZP8 Prickle4-202ENSMUST00000113300 1110 ntAPPRIS P1 TSL 5 BASIC11.38□□□□□ -0.59
Herc1E9PZP8 Gm15378-201ENSMUST00000121894 207 ntBASIC11.38□□□□□ -0.59
Herc1E9PZP8 Foxa2-202ENSMUST00000109964 2070 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Herc1E9PZP8 Eif4e2-205ENSMUST00000113232 1125 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Herc1E9PZP8 Smim14-202ENSMUST00000121661 1056 ntAPPRIS P1 TSL 3 BASIC11.37□□□□□ -0.59
Herc1E9PZP8 Ccnd2-204ENSMUST00000201637 1006 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Herc1E9PZP8 Dbp-201ENSMUST00000080885 1837 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Herc1E9PZP8 2410022M11Rik-201ENSMUST00000186474 1911 ntBASIC11.37□□□□□ -0.59
Herc1E9PZP8 Ube2g2-204ENSMUST00000174510 2031 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Herc1E9PZP8 1810059H22Rik-205ENSMUST00000204570 690 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Herc1E9PZP8 Hint1-201ENSMUST00000020504 636 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Herc1E9PZP8 Btg1-202ENSMUST00000218953 668 ntTSL 2 BASIC11.37□□□□□ -0.59
Herc1E9PZP8 Wdr20-205ENSMUST00000193053 1351 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Herc1E9PZP8 Gm28793-201ENSMUST00000190845 413 ntTSL 5 BASIC11.37□□□□□ -0.59
Herc1E9PZP8 Ttc9-201ENSMUST00000036116 2042 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Herc1E9PZP8 Zdhhc4-201ENSMUST00000001900 1364 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Herc1E9PZP8 Dhrs7-201ENSMUST00000021512 1385 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Herc1E9PZP8 Gm15952-201ENSMUST00000122858 490 ntTSL 3 BASIC11.37□□□□□ -0.59
Herc1E9PZP8 Smn1-202ENSMUST00000091321 223 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Herc1E9PZP8 2310022A10Rik-205ENSMUST00000187960 1989 ntAPPRIS ALT2 TSL 5 BASIC11.37□□□□□ -0.59
Herc1E9PZP8 Wnt5b-204ENSMUST00000178696 2371 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Herc1E9PZP8 Il23a-201ENSMUST00000026449 1360 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Herc1E9PZP8 Tlcd2-202ENSMUST00000108435 1112 ntAPPRIS ALT2 TSL 1 (best) BASIC11.36□□□□□ -0.59
Herc1E9PZP8 Plvap-201ENSMUST00000048452 1987 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Herc1E9PZP8 Ssx2ip-202ENSMUST00000106149 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC11.36□□□□□ -0.59
Herc1E9PZP8 Gm23634-201ENSMUST00000175071 91 ntBASIC11.36□□□□□ -0.59
Herc1E9PZP8 Nthl1-201ENSMUST00000047611 1080 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Herc1E9PZP8 Gm45472-201ENSMUST00000211295 1426 ntTSL 5 BASIC11.36□□□□□ -0.59
Herc1E9PZP8 Gnai2-203ENSMUST00000192837 421 ntTSL 5 BASIC11.36□□□□□ -0.59
Herc1E9PZP8 Lsm1-203ENSMUST00000211168 343 ntTSL 3 BASIC11.36□□□□□ -0.59
Herc1E9PZP8 Oser1-201ENSMUST00000046908 1620 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Herc1E9PZP8 Dhodh-209ENSMUST00000143900 1455 ntTSL 5 BASIC11.36□□□□□ -0.59
Herc1E9PZP8 Pcyox1-206ENSMUST00000204116 546 ntTSL 5 BASIC11.36□□□□□ -0.59
Herc1E9PZP8 3110062M04Rik-202ENSMUST00000115006 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC11.36□□□□□ -0.59
Herc1E9PZP8 Gm16295-201ENSMUST00000139512 643 ntTSL 3 BASIC11.35□□□□□ -0.59
Herc1E9PZP8 Id1-201ENSMUST00000038368 934 ntAPPRIS P2 TSL 1 (best) BASIC11.35□□□□□ -0.59
Herc1E9PZP8 Cdo1-201ENSMUST00000035804 1530 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Herc1E9PZP8 Shq1-201ENSMUST00000089245 1638 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Herc1E9PZP8 Evl-201ENSMUST00000021689 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC11.35□□□□□ -0.59
Herc1E9PZP8 Ndrg2-202ENSMUST00000111632 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Herc1E9PZP8 Apcdd1-202ENSMUST00000163716 1888 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Herc1E9PZP8 Lmbr1-207ENSMUST00000200564 1598 ntTSL 5 BASIC11.35□□□□□ -0.59
Herc1E9PZP8 Psmg4-201ENSMUST00000124996 474 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
Herc1E9PZP8 Rab3c-203ENSMUST00000224180 967 ntBASIC11.35□□□□□ -0.59
Herc1E9PZP8 AC154621.1-201ENSMUST00000226155 1119 ntBASIC11.35□□□□□ -0.59
Herc1E9PZP8 0610009B22Rik-201ENSMUST00000007921 813 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Herc1E9PZP8 Nrg3-202ENSMUST00000168810 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC11.35□□□□□ -0.59
Herc1E9PZP8 Alx3-201ENSMUST00000014747 1874 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Herc1E9PZP8 Osbpl10-207ENSMUST00000183104 2477 ntAPPRIS P1 TSL 5 BASIC11.35□□□□□ -0.59
Herc1E9PZP8 Gm43514-201ENSMUST00000198852 424 ntBASIC11.35□□□□□ -0.59
Herc1E9PZP8 St6galnac6-203ENSMUST00000095044 2394 ntAPPRIS P3 TSL 1 (best) BASIC11.34□□□□□ -0.59
Herc1E9PZP8 1700065D16Rik-204ENSMUST00000189348 1540 ntTSL 2 BASIC11.34□□□□□ -0.59
Herc1E9PZP8 Pcsk1n-201ENSMUST00000041096 2193 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Herc1E9PZP8 Hoxa11os-201ENSMUST00000134512 1839 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Herc1E9PZP8 Mpc1-205ENSMUST00000142594 961 ntTSL 5 BASIC11.34□□□□□ -0.59
Herc1E9PZP8 Rps2-ps11-201ENSMUST00000195283 868 ntBASIC11.34□□□□□ -0.59
Herc1E9PZP8 Stard3nl-209ENSMUST00000221380 1268 ntTSL 5 BASIC11.34□□□□□ -0.59
Herc1E9PZP8 Lce1i-201ENSMUST00000090866 731 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Herc1E9PZP8 Clk2-203ENSMUST00000121931 2112 ntAPPRIS ALT1 TSL 5 BASIC11.34□□□□□ -0.59
Herc1E9PZP8 Cdc20-201ENSMUST00000006565 1793 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Herc1E9PZP8 Zfp524-201ENSMUST00000086349 1142 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Herc1E9PZP8 Dio3-201ENSMUST00000097228 1449 ntBASIC11.34□□□□□ -0.59
Herc1E9PZP8 Tspan33-202ENSMUST00000115250 1977 ntAPPRIS ALT1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Herc1E9PZP8 Fancf-201ENSMUST00000169357 1691 ntAPPRIS P1 BASIC11.34□□□□□ -0.59
Herc1E9PZP8 Bmyc-201ENSMUST00000061483 983 ntAPPRIS P1 BASIC11.34□□□□□ -0.59
Herc1E9PZP8 Prr3-202ENSMUST00000165613 767 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Herc1E9PZP8 Rian-206ENSMUST00000182119 329 ntTSL 3 BASIC11.34□□□□□ -0.59
Retrieved 100 of 76,532 protein–RNA pairs in 48.4 ms