Protein–RNA interactions for Protein: A0A0G2JFX6

Trav7-5, T cell receptor alpha variable 7-5 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav7-5A0A0G2JFX6 Gm3448-202ENSMUST00000097400 747 ntAPPRIS ALT2 TSL 5 BASIC15.46■□□□□ 0.07
Trav7-5A0A0G2JFX6 Pick1-204ENSMUST00000163571 2054 ntAPPRIS P1 TSL 5 BASIC15.46■□□□□ 0.07
Trav7-5A0A0G2JFX6 Sh3bp1-204ENSMUST00000109698 1923 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
Trav7-5A0A0G2JFX6 Acot3-203ENSMUST00000223080 1545 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
Trav7-5A0A0G2JFX6 Galnt11-201ENSMUST00000045737 2552 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Trav7-5A0A0G2JFX6 Rbm38-201ENSMUST00000029014 1768 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Trav7-5A0A0G2JFX6 Rabgap1l-216ENSMUST00000195442 1877 ntTSL 1 (best) BASIC15.46■□□□□ 0.06
Trav7-5A0A0G2JFX6 Lzts2-202ENSMUST00000178087 2773 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
Trav7-5A0A0G2JFX6 Pcgf6-201ENSMUST00000026032 2098 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Trav7-5A0A0G2JFX6 3110053B16Rik-202ENSMUST00000140360 2004 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Trav7-5A0A0G2JFX6 Evi5l-209ENSMUST00000177053 1542 ntAPPRIS P3 TSL 1 (best) BASIC15.45■□□□□ 0.06
Trav7-5A0A0G2JFX6 D630036H23Rik-201ENSMUST00000171007 940 ntAPPRIS P1 BASIC15.45■□□□□ 0.06
Trav7-5A0A0G2JFX6 Ttc39b-201ENSMUST00000030205 842 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Trav7-5A0A0G2JFX6 Vav2-201ENSMUST00000056176 5221 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Trav7-5A0A0G2JFX6 Eif5a-202ENSMUST00000070996 1373 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Trav7-5A0A0G2JFX6 Setd4-202ENSMUST00000113951 1826 ntAPPRIS P1 TSL 5 BASIC15.45■□□□□ 0.06
Trav7-5A0A0G2JFX6 Chpt1-203ENSMUST00000117440 4863 ntAPPRIS ALT2 TSL 5 BASIC15.45■□□□□ 0.06
Trav7-5A0A0G2JFX6 Sept5-201ENSMUST00000096987 2127 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Trav7-5A0A0G2JFX6 Adgrl1-207ENSMUST00000141158 8181 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Trav7-5A0A0G2JFX6 Maz-203ENSMUST00000205568 2650 ntAPPRIS P1 TSL 5 BASIC15.44■□□□□ 0.06
Trav7-5A0A0G2JFX6 Arhgap27-202ENSMUST00000092557 1504 ntTSL 2 BASIC15.44■□□□□ 0.06
Trav7-5A0A0G2JFX6 Ets1-202ENSMUST00000050797 1976 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Trav7-5A0A0G2JFX6 Smad2-205ENSMUST00000168423 2857 ntAPPRIS P3 TSL 1 (best) BASIC15.44■□□□□ 0.06
Trav7-5A0A0G2JFX6 Gm26660-201ENSMUST00000181582 2543 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Trav7-5A0A0G2JFX6 Rhoq-201ENSMUST00000024956 4151 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Trav7-5A0A0G2JFX6 Nphp1-202ENSMUST00000110357 2296 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.06
Trav7-5A0A0G2JFX6 Bola1-202ENSMUST00000107099 995 ntAPPRIS P1 TSL 2 BASIC15.44■□□□□ 0.06
Trav7-5A0A0G2JFX6 Taf3-203ENSMUST00000114907 695 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Trav7-5A0A0G2JFX6 Bola1-201ENSMUST00000016087 729 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Trav7-5A0A0G2JFX6 Bola1-203ENSMUST00000177442 692 ntAPPRIS P1 TSL 3 BASIC15.44■□□□□ 0.06
Trav7-5A0A0G2JFX6 Gm43137-201ENSMUST00000198052 594 ntBASIC15.44■□□□□ 0.06
Trav7-5A0A0G2JFX6 Gm44866-201ENSMUST00000208774 391 ntTSL 2 BASIC15.44■□□□□ 0.06
Trav7-5A0A0G2JFX6 Ercc6l2-208ENSMUST00000144763 1820 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Trav7-5A0A0G2JFX6 Kcnk15-202ENSMUST00000109396 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.06
Trav7-5A0A0G2JFX6 Fam49b-202ENSMUST00000164532 1770 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Trav7-5A0A0G2JFX6 Bag5-202ENSMUST00000160576 1852 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Trav7-5A0A0G2JFX6 3830408C21Rik-205ENSMUST00000225426 1898 ntBASIC15.44■□□□□ 0.06
Trav7-5A0A0G2JFX6 Zfp644-204ENSMUST00000112696 5785 ntAPPRIS ALT2 TSL 5 BASIC15.43■□□□□ 0.06
Trav7-5A0A0G2JFX6 Dda1-202ENSMUST00000124745 1933 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Trav7-5A0A0G2JFX6 Fgfr1-215ENSMUST00000179592 5041 ntTSL 5 BASIC15.43■□□□□ 0.06
Trav7-5A0A0G2JFX6 Igfbp7-202ENSMUST00000163898 1200 ntAPPRIS P4 TSL 5 BASIC15.43■□□□□ 0.06
Trav7-5A0A0G2JFX6 Zfp36l1-204ENSMUST00000219642 545 ntTSL 3 BASIC15.43■□□□□ 0.06
Trav7-5A0A0G2JFX6 Trmt112-201ENSMUST00000088257 957 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Trav7-5A0A0G2JFX6 Spint2-201ENSMUST00000098604 1384 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Trav7-5A0A0G2JFX6 Meg3-207ENSMUST00000143836 1896 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Trav7-5A0A0G2JFX6 Sephs2-201ENSMUST00000082428 2177 ntAPPRIS P1 BASIC15.43■□□□□ 0.06
Trav7-5A0A0G2JFX6 Hccs-202ENSMUST00000112115 2473 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Trav7-5A0A0G2JFX6 Caskin1-201ENSMUST00000024958 6172 ntAPPRIS P1 TSL 5 BASIC15.43■□□□□ 0.06
Trav7-5A0A0G2JFX6 Bola3-207ENSMUST00000136501 2312 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Trav7-5A0A0G2JFX6 Slc39a7-203ENSMUST00000169397 2107 ntAPPRIS P1 TSL 5 BASIC15.43■□□□□ 0.06
Trav7-5A0A0G2JFX6 Dbnl-201ENSMUST00000020769 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC15.43■□□□□ 0.06
Trav7-5A0A0G2JFX6 Ripply3-201ENSMUST00000023660 1531 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Trav7-5A0A0G2JFX6 Stmn4-201ENSMUST00000074523 1303 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Trav7-5A0A0G2JFX6 Rora-202ENSMUST00000113624 2591 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Trav7-5A0A0G2JFX6 Ppp6r2-202ENSMUST00000226221 2559 ntBASIC15.42■□□□□ 0.06
Trav7-5A0A0G2JFX6 Lig3-204ENSMUST00000131537 1782 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Trav7-5A0A0G2JFX6 Lig3-209ENSMUST00000173009 1785 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Trav7-5A0A0G2JFX6 Rell2-212ENSMUST00000177058 1762 ntAPPRIS P1 TSL 5 BASIC15.42■□□□□ 0.06
Trav7-5A0A0G2JFX6 B430218F22Rik-201ENSMUST00000181168 1495 ntAPPRIS P1 BASIC15.42■□□□□ 0.06
Trav7-5A0A0G2JFX6 Rdh14-201ENSMUST00000020947 1480 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Trav7-5A0A0G2JFX6 Ppa1-201ENSMUST00000020286 1364 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Trav7-5A0A0G2JFX6 BC004004-202ENSMUST00000120346 1297 ntAPPRIS P1 TSL 5 BASIC15.42■□□□□ 0.06
Trav7-5A0A0G2JFX6 Gm27454-201ENSMUST00000185090 204 ntBASIC15.42■□□□□ 0.06
Trav7-5A0A0G2JFX6 Gm7160-202ENSMUST00000188519 1027 ntBASIC15.42■□□□□ 0.06
Trav7-5A0A0G2JFX6 Rfxap-204ENSMUST00000217267 696 ntAPPRIS P2 TSL 1 (best) BASIC15.42■□□□□ 0.06
Trav7-5A0A0G2JFX6 AC158777.2-201ENSMUST00000228787 398 ntAPPRIS P1 BASIC15.42■□□□□ 0.06
Trav7-5A0A0G2JFX6 Kremen2-201ENSMUST00000046525 2123 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Trav7-5A0A0G2JFX6 Nenf-201ENSMUST00000046770 742 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Trav7-5A0A0G2JFX6 Gpx4-201ENSMUST00000097227 995 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Trav7-5A0A0G2JFX6 A630072M18Rik-201ENSMUST00000190567 5410 ntBASIC15.42■□□□□ 0.06
Trav7-5A0A0G2JFX6 Iqck-206ENSMUST00000208658 2891 ntBASIC15.42■□□□□ 0.06
Trav7-5A0A0G2JFX6 Ube2d2a-202ENSMUST00000170693 2483 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Trav7-5A0A0G2JFX6 Rhno1-203ENSMUST00000112152 2015 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Trav7-5A0A0G2JFX6 Hck-202ENSMUST00000109799 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
Trav7-5A0A0G2JFX6 Hck-203ENSMUST00000189688 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
Trav7-5A0A0G2JFX6 Hck-201ENSMUST00000003370 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
Trav7-5A0A0G2JFX6 1700016H13Rik-203ENSMUST00000120108 797 ntAPPRIS P1 TSL 2 BASIC15.41■□□□□ 0.06
Trav7-5A0A0G2JFX6 Slc25a41-201ENSMUST00000058661 1225 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
Trav7-5A0A0G2JFX6 1700007K13Rik-201ENSMUST00000086370 812 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Trav7-5A0A0G2JFX6 Hoxd13-201ENSMUST00000001872 2483 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Trav7-5A0A0G2JFX6 Tmem185a-202ENSMUST00000114630 1307 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Trav7-5A0A0G2JFX6 Tial1-209ENSMUST00000141126 1344 ntTSL 5 BASIC15.41■□□□□ 0.06
Trav7-5A0A0G2JFX6 Prkab1-201ENSMUST00000031486 2089 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Trav7-5A0A0G2JFX6 Chst12-201ENSMUST00000043050 2331 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Trav7-5A0A0G2JFX6 Desi2-204ENSMUST00000161075 2590 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Trav7-5A0A0G2JFX6 Trim47-201ENSMUST00000021120 2204 ntAPPRIS P4 TSL 1 (best) BASIC15.4■□□□□ 0.06
Trav7-5A0A0G2JFX6 Kcnc3-207ENSMUST00000209177 2960 ntAPPRIS ALT2 TSL 5 BASIC15.4■□□□□ 0.06
Trav7-5A0A0G2JFX6 En2-201ENSMUST00000036177 3539 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Trav7-5A0A0G2JFX6 Gm10125-201ENSMUST00000074702 2286 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Trav7-5A0A0G2JFX6 Eif5a-209ENSMUST00000108612 1259 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Trav7-5A0A0G2JFX6 Pou3f1-201ENSMUST00000053491 3849 ntAPPRIS P1 BASIC15.4■□□□□ 0.06
Trav7-5A0A0G2JFX6 Kdelr3-201ENSMUST00000010974 1414 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Trav7-5A0A0G2JFX6 Slc30a9-204ENSMUST00000162372 5711 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
Trav7-5A0A0G2JFX6 Lmtk3-201ENSMUST00000072580 4807 ntAPPRIS P2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Trav7-5A0A0G2JFX6 Mgat1-213ENSMUST00000167400 3151 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
Trav7-5A0A0G2JFX6 Syt6-205ENSMUST00000121834 1710 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Trav7-5A0A0G2JFX6 Pelo-201ENSMUST00000109226 1600 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Trav7-5A0A0G2JFX6 Gm10209-201ENSMUST00000203397 1607 ntBASIC15.39■□□□□ 0.05
Trav7-5A0A0G2JFX6 AC152827.1-201ENSMUST00000221143 2189 ntBASIC15.39■□□□□ 0.05
Trav7-5A0A0G2JFX6 Prkar1b-201ENSMUST00000026973 2637 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Retrieved 100 of 76,532 protein–RNA pairs in 8.4 ms