Protein–RNA interactions for Protein: A0A075B6B0

Trav6d-7, T cell receptor alpha variable 6D-7 (Fragment), mousemouse

Predictions only

Length 112 aa.

Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6d-7A0A075B6B0 AI115009-201ENSMUST00000181093 1853 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Trav6d-7A0A075B6B0 Arfrp1-203ENSMUST00000127988 2447 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trav6d-7A0A075B6B0 E130311K13Rik-201ENSMUST00000061706 1640 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trav6d-7A0A075B6B0 Ccdc149-202ENSMUST00000198008 2470 ntTSL 5 BASIC15.18■□□□□ 0.02
Trav6d-7A0A075B6B0 Dhx33-204ENSMUST00000124464 1835 ntTSL 5 BASIC15.18■□□□□ 0.02
Trav6d-7A0A075B6B0 Gm12922-201ENSMUST00000120626 809 ntBASIC15.18■□□□□ 0.02
Trav6d-7A0A075B6B0 2900079G21Rik-201ENSMUST00000139552 1139 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Trav6d-7A0A075B6B0 Dctn3-203ENSMUST00000171641 885 ntTSL 3 BASIC15.18■□□□□ 0.02
Trav6d-7A0A075B6B0 Rps6ka3-201ENSMUST00000033671 7244 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trav6d-7A0A075B6B0 Pafah1b1-201ENSMUST00000021091 5803 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trav6d-7A0A075B6B0 Uchl5-206ENSMUST00000189936 1696 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trav6d-7A0A075B6B0 Wdr41-202ENSMUST00000159647 2289 ntTSL 5 BASIC15.18■□□□□ 0.02
Trav6d-7A0A075B6B0 Wdr41-206ENSMUST00000167155 2289 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Trav6d-7A0A075B6B0 Hoxd3-201ENSMUST00000047830 2292 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
Trav6d-7A0A075B6B0 Rasl11b-201ENSMUST00000051937 1812 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trav6d-7A0A075B6B0 Rasef-203ENSMUST00000222414 2127 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
Trav6d-7A0A075B6B0 Cobll1-202ENSMUST00000102726 5031 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trav6d-7A0A075B6B0 Cobll1-203ENSMUST00000112429 5045 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
Trav6d-7A0A075B6B0 Sec24b-201ENSMUST00000001079 5128 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trav6d-7A0A075B6B0 Gm15202-201ENSMUST00000154188 393 ntTSL 3 BASIC15.17■□□□□ 0.02
Trav6d-7A0A075B6B0 Bcl2l10-201ENSMUST00000034709 1220 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trav6d-7A0A075B6B0 Ssr2-201ENSMUST00000035785 1189 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trav6d-7A0A075B6B0 5730507C01Rik-201ENSMUST00000063216 2431 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trav6d-7A0A075B6B0 Ank1-202ENSMUST00000084038 8147 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trav6d-7A0A075B6B0 Ache-209ENSMUST00000196208 1911 ntTSL 5 BASIC15.17■□□□□ 0.02
Trav6d-7A0A075B6B0 Stk35-201ENSMUST00000165413 2882 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trav6d-7A0A075B6B0 Zfp697-201ENSMUST00000056096 5166 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trav6d-7A0A075B6B0 Zc3h8-201ENSMUST00000028866 1624 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trav6d-7A0A075B6B0 Xylt1-201ENSMUST00000032892 9020 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trav6d-7A0A075B6B0 Bspry-202ENSMUST00000107449 2167 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trav6d-7A0A075B6B0 Ccdc50-201ENSMUST00000039443 2192 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Trav6d-7A0A075B6B0 Kctd20-204ENSMUST00000122163 2423 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
Trav6d-7A0A075B6B0 Hsf1-204ENSMUST00000226872 2104 ntBASIC15.16■□□□□ 0.02
Trav6d-7A0A075B6B0 Hoxa9-202ENSMUST00000114425 851 ntTSL 2 BASIC15.16■□□□□ 0.02
Trav6d-7A0A075B6B0 Gm26558-201ENSMUST00000180559 861 ntAPPRIS P1 BASIC15.16■□□□□ 0.02
Trav6d-7A0A075B6B0 Ssbp3-201ENSMUST00000030367 3195 ntAPPRIS P2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Trav6d-7A0A075B6B0 Dgcr6-209ENSMUST00000155387 1415 ntTSL 3 BASIC15.16■□□□□ 0.02
Trav6d-7A0A075B6B0 Vmn1r17-205ENSMUST00000228342 2230 ntAPPRIS P2 BASIC15.16■□□□□ 0.02
Trav6d-7A0A075B6B0 Wrap73-201ENSMUST00000030895 1598 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trav6d-7A0A075B6B0 Rnf8-201ENSMUST00000024817 2077 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trav6d-7A0A075B6B0 Fndc4-201ENSMUST00000041266 1375 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trav6d-7A0A075B6B0 Pank2-204ENSMUST00000150843 4266 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trav6d-7A0A075B6B0 Bex1-202ENSMUST00000113118 754 ntAPPRIS P1 TSL 2 BASIC15.15■□□□□ 0.02
Trav6d-7A0A075B6B0 Gm13001-201ENSMUST00000154285 774 ntTSL 2 BASIC15.15■□□□□ 0.02
Trav6d-7A0A075B6B0 5930403N24Rik-204ENSMUST00000217338 337 ntTSL 2 BASIC15.15■□□□□ 0.02
Trav6d-7A0A075B6B0 D130020L05Rik-203ENSMUST00000221044 803 ntTSL 2 BASIC15.15■□□□□ 0.02
Trav6d-7A0A075B6B0 Alad-201ENSMUST00000030090 1206 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trav6d-7A0A075B6B0 Nenf-201ENSMUST00000046770 742 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trav6d-7A0A075B6B0 Ccdc74a-201ENSMUST00000056962 1273 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
Trav6d-7A0A075B6B0 Qrich1-206ENSMUST00000193258 2291 ntTSL 2 BASIC15.15■□□□□ 0.02
Trav6d-7A0A075B6B0 Sos1-201ENSMUST00000068714 8919 ntAPPRIS P1 TSL 2 BASIC15.15■□□□□ 0.02
Trav6d-7A0A075B6B0 Porcn-203ENSMUST00000089402 1839 ntAPPRIS ALT1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trav6d-7A0A075B6B0 Eif5a-210ENSMUST00000108613 1343 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trav6d-7A0A075B6B0 Tsen34-202ENSMUST00000108627 1319 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Trav6d-7A0A075B6B0 Hrh3-201ENSMUST00000056480 2706 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Trav6d-7A0A075B6B0 Gm5112-201ENSMUST00000204407 2368 ntBASIC15.14■□□□□ 0.01
Trav6d-7A0A075B6B0 Spry1-202ENSMUST00000108107 2773 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trav6d-7A0A075B6B0 Tesmin-204ENSMUST00000151341 2013 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Trav6d-7A0A075B6B0 Cblc-202ENSMUST00000108449 1514 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Trav6d-7A0A075B6B0 Aplp1-201ENSMUST00000006828 2343 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trav6d-7A0A075B6B0 Picalm-215ENSMUST00000209068 3511 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
Trav6d-7A0A075B6B0 A930032L01Rik-201ENSMUST00000195845 957 ntBASIC15.14■□□□□ 0.01
Trav6d-7A0A075B6B0 Junb-201ENSMUST00000064922 1809 ntAPPRIS P1 BASIC15.14■□□□□ 0.01
Trav6d-7A0A075B6B0 Mast4-202ENSMUST00000164111 2350 ntTSL 2 BASIC15.14■□□□□ 0.01
Trav6d-7A0A075B6B0 Tbc1d25-204ENSMUST00000172020 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trav6d-7A0A075B6B0 Fyn-204ENSMUST00000126486 2495 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Trav6d-7A0A075B6B0 Slc25a38-201ENSMUST00000035106 1791 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Trav6d-7A0A075B6B0 Kcnn4-202ENSMUST00000205428 1945 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Trav6d-7A0A075B6B0 Smap2-201ENSMUST00000043200 2905 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Trav6d-7A0A075B6B0 Eml4-203ENSMUST00000112363 5238 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Trav6d-7A0A075B6B0 Fam117b-201ENSMUST00000036540 5532 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Trav6d-7A0A075B6B0 Cerk-201ENSMUST00000044332 4518 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Trav6d-7A0A075B6B0 5730507C01Rik-202ENSMUST00000177778 2542 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Trav6d-7A0A075B6B0 E130307A14Rik-202ENSMUST00000133302 438 ntTSL 5 BASIC15.13■□□□□ 0.01
Trav6d-7A0A075B6B0 Tusc3-202ENSMUST00000169034 1262 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Trav6d-7A0A075B6B0 Syt7-203ENSMUST00000169121 6834 ntTSL 5 BASIC15.13■□□□□ 0.01
Trav6d-7A0A075B6B0 Gatad1-201ENSMUST00000007559 2545 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Trav6d-7A0A075B6B0 Rbm38-204ENSMUST00000173393 2071 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
Trav6d-7A0A075B6B0 Psmd11-214ENSMUST00000173938 1626 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Trav6d-7A0A075B6B0 Gtpbp2-217ENSMUST00000172170 2587 ntTSL 5 BASIC15.13■□□□□ 0.01
Trav6d-7A0A075B6B0 Stau2-201ENSMUST00000027052 2763 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Trav6d-7A0A075B6B0 1810010H24Rik-202ENSMUST00000140447 1677 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
Trav6d-7A0A075B6B0 Ankle2-201ENSMUST00000031474 5215 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trav6d-7A0A075B6B0 Shisa7-203ENSMUST00000119433 3481 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trav6d-7A0A075B6B0 Eif3j2-201ENSMUST00000057110 2379 ntAPPRIS P1 BASIC15.12■□□□□ 0.01
Trav6d-7A0A075B6B0 Celf6-202ENSMUST00000118164 1583 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Trav6d-7A0A075B6B0 Tbc1d25-201ENSMUST00000039892 2648 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trav6d-7A0A075B6B0 Tmem59-202ENSMUST00000106753 1148 ntTSL 5 BASIC15.12■□□□□ 0.01
Trav6d-7A0A075B6B0 Tpm1-206ENSMUST00000113686 998 ntTSL 5 BASIC15.12■□□□□ 0.01
Trav6d-7A0A075B6B0 Zfp963-202ENSMUST00000154063 640 ntTSL 3 BASIC15.12■□□□□ 0.01
Trav6d-7A0A075B6B0 Tmem196-202ENSMUST00000183694 845 ntTSL 3 BASIC15.12■□□□□ 0.01
Trav6d-7A0A075B6B0 Gtf2e2-202ENSMUST00000170705 1634 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trav6d-7A0A075B6B0 Dus1l-203ENSMUST00000106135 1863 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
Trav6d-7A0A075B6B0 Camk2b-201ENSMUST00000002817 1872 ntTSL 5 BASIC15.12■□□□□ 0.01
Trav6d-7A0A075B6B0 1700008J07Rik-201ENSMUST00000185351 2432 ntBASIC15.12■□□□□ 0.01
Trav6d-7A0A075B6B0 Med16-204ENSMUST00000165684 2950 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trav6d-7A0A075B6B0 Nudt19-201ENSMUST00000040962 2298 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trav6d-7A0A075B6B0 Prr7-201ENSMUST00000046533 1359 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trav6d-7A0A075B6B0 March8-204ENSMUST00000123405 2102 ntTSL 5 BASIC15.11■□□□□ 0.01
Trav6d-7A0A075B6B0 Cachd1-201ENSMUST00000030257 5765 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 110.1 ms