Protein–RNA interactions for Protein: Q9QZR9

Col4a4, Collagen alpha-4(IV) chain, mousemouse

Predictions only

Length 1,682 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a4Q9QZR9 Cyp4f13-204ENSMUST00000139353 1389 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
Col4a4Q9QZR9 Eef1a2-201ENSMUST00000055990 2084 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Col4a4Q9QZR9 Art5-204ENSMUST00000106937 1713 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Col4a4Q9QZR9 Adssl1-202ENSMUST00000180015 1819 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
Col4a4Q9QZR9 A830035O19Rik-201ENSMUST00000216147 1898 ntBASIC20.39■□□□□ 0.86
Col4a4Q9QZR9 Gsr-201ENSMUST00000033992 2673 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
Col4a4Q9QZR9 Cck-201ENSMUST00000035120 691 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
Col4a4Q9QZR9 Gm6365-201ENSMUST00000054711 744 ntBASIC20.39■□□□□ 0.86
Col4a4Q9QZR9 Gm10655-201ENSMUST00000098658 1397 ntBASIC20.39■□□□□ 0.85
Col4a4Q9QZR9 Gm21992-201ENSMUST00000172000 1434 ntAPPRIS P1 TSL 2 BASIC20.39■□□□□ 0.85
Col4a4Q9QZR9 Gm21992-206ENSMUST00000179909 1435 ntTSL 5 BASIC20.39■□□□□ 0.85
Col4a4Q9QZR9 Gnb2-201ENSMUST00000031726 1860 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Col4a4Q9QZR9 Cdkn1c-201ENSMUST00000037287 1901 ntAPPRIS P3 TSL 1 (best) BASIC20.39■□□□□ 0.85
Col4a4Q9QZR9 Hoxb9-201ENSMUST00000000010 2574 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Col4a4Q9QZR9 Mpc1-208ENSMUST00000155364 958 ntAPPRIS P1 TSL 2 BASIC20.38■□□□□ 0.85
Col4a4Q9QZR9 Klf13-204ENSMUST00000185175 487 ntTSL 2 BASIC20.38■□□□□ 0.85
Col4a4Q9QZR9 Impa2-201ENSMUST00000025403 1661 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Col4a4Q9QZR9 Fgf8-202ENSMUST00000026241 1168 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Col4a4Q9QZR9 Txnrd1-208ENSMUST00000219962 2297 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Col4a4Q9QZR9 Hnrnpa3-204ENSMUST00000111964 1654 ntAPPRIS P3 TSL 1 (best) BASIC20.37■□□□□ 0.85
Col4a4Q9QZR9 Maf1-205ENSMUST00000160853 1651 ntAPPRIS P2 TSL 1 (best) BASIC20.37■□□□□ 0.85
Col4a4Q9QZR9 1110004F10Rik-202ENSMUST00000106607 1153 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Col4a4Q9QZR9 5730522E02Rik-201ENSMUST00000109511 1162 ntAPPRIS P5 TSL 1 (best) BASIC20.37■□□□□ 0.85
Col4a4Q9QZR9 a-202ENSMUST00000109697 705 ntAPPRIS P1 TSL 5 BASIC20.37■□□□□ 0.85
Col4a4Q9QZR9 Gm27275-201ENSMUST00000184318 272 ntBASIC20.37■□□□□ 0.85
Col4a4Q9QZR9 4833428L15Rik-202ENSMUST00000215652 641 ntTSL 3 BASIC20.37■□□□□ 0.85
Col4a4Q9QZR9 Cfap20-201ENSMUST00000034249 1295 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Col4a4Q9QZR9 Kazald1-202ENSMUST00000111948 1625 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Col4a4Q9QZR9 Ppp1r36-201ENSMUST00000063977 1515 ntAPPRIS P1 TSL 5 BASIC20.37■□□□□ 0.85
Col4a4Q9QZR9 Lrrc14-201ENSMUST00000036423 2093 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Col4a4Q9QZR9 Anapc16-201ENSMUST00000020307 1379 ntTSL 2 BASIC20.36■□□□□ 0.85
Col4a4Q9QZR9 Immp2l-203ENSMUST00000134965 977 ntAPPRIS P1 TSL 5 BASIC20.36■□□□□ 0.85
Col4a4Q9QZR9 Slc7a6os-201ENSMUST00000035925 1246 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Col4a4Q9QZR9 Tcp11-203ENSMUST00000114836 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
Col4a4Q9QZR9 Dao-201ENSMUST00000086599 1525 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Col4a4Q9QZR9 Tmprss5-205ENSMUST00000170246 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
Col4a4Q9QZR9 Hoxa11-201ENSMUST00000048026 2287 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Col4a4Q9QZR9 Ccdc84-201ENSMUST00000053286 1725 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Col4a4Q9QZR9 Rps2-ps11-201ENSMUST00000195283 868 ntBASIC20.35■□□□□ 0.85
Col4a4Q9QZR9 Usf3-201ENSMUST00000088356 757 ntAPPRIS ALT2 TSL 5 BASIC20.35■□□□□ 0.85
Col4a4Q9QZR9 Pi4kb-207ENSMUST00000167008 1962 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Col4a4Q9QZR9 Gimap1-201ENSMUST00000054368 1493 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Col4a4Q9QZR9 Chrna7-201ENSMUST00000032738 2078 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Col4a4Q9QZR9 Atp8a1-204ENSMUST00000113652 854 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Col4a4Q9QZR9 8430422M14Rik-201ENSMUST00000199608 822 ntBASIC20.35■□□□□ 0.85
Col4a4Q9QZR9 Macrod2-202ENSMUST00000078027 1669 ntAPPRIS P2 TSL 5 BASIC20.34■□□□□ 0.85
Col4a4Q9QZR9 2610307P16Rik-205ENSMUST00000148885 1870 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Col4a4Q9QZR9 Prdm11-205ENSMUST00000178666 1870 ntTSL 5 BASIC20.34■□□□□ 0.85
Col4a4Q9QZR9 Dlx2-201ENSMUST00000024159 2473 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Col4a4Q9QZR9 Gm20878-202ENSMUST00000108028 339 ntAPPRIS ALT2 TSL 5 BASIC20.34■□□□□ 0.85
Col4a4Q9QZR9 Ankrd33b-202ENSMUST00000076942 1641 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Col4a4Q9QZR9 Fam220a-204ENSMUST00000119488 2202 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Col4a4Q9QZR9 Fam220a-209ENSMUST00000200267 2202 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Col4a4Q9QZR9 Caml-201ENSMUST00000021963 1382 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Col4a4Q9QZR9 Efhd2-201ENSMUST00000036854 2381 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Col4a4Q9QZR9 Tial1-209ENSMUST00000141126 1344 ntTSL 5 BASIC20.33■□□□□ 0.85
Col4a4Q9QZR9 Gm15155-201ENSMUST00000112542 1009 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Col4a4Q9QZR9 Tex30-204ENSMUST00000128190 1275 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Col4a4Q9QZR9 Gm13647-201ENSMUST00000154654 622 ntTSL 5 BASIC20.33■□□□□ 0.85
Col4a4Q9QZR9 Mir9-3hg-206ENSMUST00000182937 636 ntTSL 3 BASIC20.33■□□□□ 0.85
Col4a4Q9QZR9 Jmjd7-201ENSMUST00000044675 1373 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Col4a4Q9QZR9 Ctf1-201ENSMUST00000047393 1352 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Col4a4Q9QZR9 Mbip-201ENSMUST00000021416 1512 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Col4a4Q9QZR9 Bsg-201ENSMUST00000067036 1526 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Col4a4Q9QZR9 Wbp1-202ENSMUST00000113936 1314 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Col4a4Q9QZR9 Hccs-201ENSMUST00000033717 2320 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Col4a4Q9QZR9 Map7-205ENSMUST00000214231 675 ntTSL 3 BASIC20.32■□□□□ 0.84
Col4a4Q9QZR9 Gm26796-201ENSMUST00000181092 2276 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Col4a4Q9QZR9 Gm11762-201ENSMUST00000135630 1705 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Col4a4Q9QZR9 Gm5913-201ENSMUST00000119397 1399 ntBASIC20.32■□□□□ 0.84
Col4a4Q9QZR9 Alx3-201ENSMUST00000014747 1874 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Col4a4Q9QZR9 Gm26879-201ENSMUST00000181127 1176 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Col4a4Q9QZR9 Rian-206ENSMUST00000182119 329 ntTSL 3 BASIC20.32■□□□□ 0.84
Col4a4Q9QZR9 Stmn1-201ENSMUST00000030636 1060 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Col4a4Q9QZR9 Ciapin1-201ENSMUST00000034233 1807 ntAPPRIS P1 TSL 5 BASIC20.31■□□□□ 0.84
Col4a4Q9QZR9 Ezh2-203ENSMUST00000114616 2670 ntAPPRIS ALT1 TSL 5 BASIC20.31■□□□□ 0.84
Col4a4Q9QZR9 Idnk-202ENSMUST00000109868 1462 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Col4a4Q9QZR9 Trabd-206ENSMUST00000169891 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
Col4a4Q9QZR9 Etv2-201ENSMUST00000108147 1048 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Col4a4Q9QZR9 Mthfsl-201ENSMUST00000113110 801 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Col4a4Q9QZR9 Mthfs-203ENSMUST00000118870 705 ntTSL 3 BASIC20.31■□□□□ 0.84
Col4a4Q9QZR9 Rsu1-209ENSMUST00000191959 720 ntTSL 3 BASIC20.31■□□□□ 0.84
Col4a4Q9QZR9 Gm29994-201ENSMUST00000195495 1193 ntBASIC20.31■□□□□ 0.84
Col4a4Q9QZR9 Mthfs-201ENSMUST00000085256 816 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Col4a4Q9QZR9 Aifm2-204ENSMUST00000105455 1512 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Col4a4Q9QZR9 Rassf7-201ENSMUST00000046890 1525 ntAPPRIS P2 TSL 1 (best) BASIC20.31■□□□□ 0.84
Col4a4Q9QZR9 Nrep-202ENSMUST00000168890 2185 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Col4a4Q9QZR9 Ebf4-203ENSMUST00000110288 2982 ntAPPRIS ALT2 TSL 5 BASIC20.3■□□□□ 0.84
Col4a4Q9QZR9 A830035A12Rik-201ENSMUST00000147445 861 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Col4a4Q9QZR9 Gm21863-201ENSMUST00000179133 336 ntAPPRIS P1 BASIC20.3■□□□□ 0.84
Col4a4Q9QZR9 2900042K21Rik-201ENSMUST00000194444 653 ntBASIC20.3■□□□□ 0.84
Col4a4Q9QZR9 Bin1-202ENSMUST00000091967 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
Col4a4Q9QZR9 Smurf1-202ENSMUST00000100461 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Col4a4Q9QZR9 Tpst2-202ENSMUST00000071455 1741 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Col4a4Q9QZR9 Gm19426-201ENSMUST00000181711 726 ntAPPRIS P1 TSL 2 BASIC20.29■□□□□ 0.84
Col4a4Q9QZR9 Lhx1-204ENSMUST00000184646 1201 ntTSL 5 BASIC20.29■□□□□ 0.84
Col4a4Q9QZR9 Aprt-201ENSMUST00000006764 849 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Col4a4Q9QZR9 Olfr322-201ENSMUST00000072030 984 ntAPPRIS P1 BASIC20.29■□□□□ 0.84
Col4a4Q9QZR9 Nisch-222ENSMUST00000172142 2780 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
Col4a4Q9QZR9 Bean1-202ENSMUST00000164076 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
Retrieved 100 of 76,532 protein–RNA pairs in 22.9 ms