Protein–RNA interactions for Protein: Q99PP7

Trim33, E3 ubiquitin-protein ligase TRIM33, mousemouse

Predictions only

Length 1,142 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim33Q99PP7 Socs2-214ENSMUST00000172070 2153 ntAPPRIS P1 TSL 2 BASIC19.55■□□□□ 0.72
Trim33Q99PP7 Mapkapk3-208ENSMUST00000192054 944 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Trim33Q99PP7 Igf2bp2-201ENSMUST00000100052 3899 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Trim33Q99PP7 Gm9934-201ENSMUST00000098303 2077 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Trim33Q99PP7 Eif5a-210ENSMUST00000108613 1343 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Trim33Q99PP7 Dtx4-201ENSMUST00000045521 5765 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Trim33Q99PP7 Hyi-205ENSMUST00000194248 936 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Trim33Q99PP7 Rexo2-208ENSMUST00000216470 454 ntTSL 3 BASIC19.54■□□□□ 0.72
Trim33Q99PP7 Prkab1-201ENSMUST00000031486 2089 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Trim33Q99PP7 Slc9a7-201ENSMUST00000072451 2512 ntAPPRIS P2 TSL 1 (best) BASIC19.54■□□□□ 0.72
Trim33Q99PP7 Gls-202ENSMUST00000114510 5596 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
Trim33Q99PP7 Trim3-203ENSMUST00000106791 2466 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Trim33Q99PP7 Dynll2-201ENSMUST00000020775 2476 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Trim33Q99PP7 Nr0b1-201ENSMUST00000026036 1808 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Trim33Q99PP7 Kcnk15-202ENSMUST00000109396 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
Trim33Q99PP7 Atrn-201ENSMUST00000028781 8745 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Trim33Q99PP7 D830036C21Rik-202ENSMUST00000208263 1548 ntBASIC19.53■□□□□ 0.72
Trim33Q99PP7 Jagn1-201ENSMUST00000101070 1201 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Trim33Q99PP7 Mark2-207ENSMUST00000165286 2975 ntAPPRIS ALT2 TSL 5 BASIC19.53■□□□□ 0.72
Trim33Q99PP7 Mrpl16-201ENSMUST00000167199 1122 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Trim33Q99PP7 Tmem196-202ENSMUST00000183694 845 ntTSL 3 BASIC19.53■□□□□ 0.72
Trim33Q99PP7 Gm10616-201ENSMUST00000205285 2127 ntBASIC19.53■□□□□ 0.72
Trim33Q99PP7 Cyc1-201ENSMUST00000023210 1194 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Trim33Q99PP7 Gnb2-201ENSMUST00000031726 1860 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Trim33Q99PP7 Kcnn2-203ENSMUST00000169783 1625 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Trim33Q99PP7 Skor2-201ENSMUST00000166956 3141 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Trim33Q99PP7 Cdkl3-202ENSMUST00000063321 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
Trim33Q99PP7 Cbln2-201ENSMUST00000068423 2475 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Trim33Q99PP7 Rell2-212ENSMUST00000177058 1762 ntAPPRIS P1 TSL 5 BASIC19.52■□□□□ 0.72
Trim33Q99PP7 Dpf1-201ENSMUST00000049977 2309 ntAPPRIS P2 TSL 1 (best) BASIC19.52■□□□□ 0.72
Trim33Q99PP7 Dbf4-201ENSMUST00000002368 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
Trim33Q99PP7 Phc2-202ENSMUST00000106079 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
Trim33Q99PP7 Ubl3-201ENSMUST00000079324 2537 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Trim33Q99PP7 4933406I18Rik-202ENSMUST00000163996 904 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Trim33Q99PP7 Gm3448-203ENSMUST00000179539 787 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
Trim33Q99PP7 Gm3448-201ENSMUST00000097399 787 ntAPPRIS P5 TSL 1 (best) BASIC19.52■□□□□ 0.72
Trim33Q99PP7 Slc35d3-201ENSMUST00000059805 2630 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
Trim33Q99PP7 Tusc3-203ENSMUST00000209440 1535 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Trim33Q99PP7 Mir6236-201ENSMUST00000184437 123 ntBASIC19.51■□□□□ 0.71
Trim33Q99PP7 1700105P06Rik-201ENSMUST00000186160 1772 ntBASIC19.51■□□□□ 0.71
Trim33Q99PP7 Rabgap1l-216ENSMUST00000195442 1877 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Trim33Q99PP7 Nexmif-201ENSMUST00000056502 5211 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
Trim33Q99PP7 Sh3bp1-204ENSMUST00000109698 1923 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Trim33Q99PP7 Shisa5-202ENSMUST00000112059 1910 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
Trim33Q99PP7 Rgs19-201ENSMUST00000002532 1511 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Trim33Q99PP7 Twist2-201ENSMUST00000007949 1329 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Trim33Q99PP7 Tcf7l1-201ENSMUST00000069536 3042 ntAPPRIS P3 TSL 1 (best) BASIC19.5■□□□□ 0.71
Trim33Q99PP7 Fam49b-202ENSMUST00000164532 1770 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Trim33Q99PP7 Gm9817-201ENSMUST00000054395 2531 ntAPPRIS P1 BASIC19.5■□□□□ 0.71
Trim33Q99PP7 Socs2-201ENSMUST00000020215 2222 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Trim33Q99PP7 Pnkd-204ENSMUST00000113805 740 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Trim33Q99PP7 Spata33-201ENSMUST00000060133 491 ntAPPRIS P2 TSL 1 (best) BASIC19.5■□□□□ 0.71
Trim33Q99PP7 Nipsnap2-201ENSMUST00000086046 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Trim33Q99PP7 Brpf3-201ENSMUST00000004985 5766 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Trim33Q99PP7 Ankrd33b-203ENSMUST00000110410 2070 ntAPPRIS P3 TSL 1 (best) BASIC19.5■□□□□ 0.71
Trim33Q99PP7 Rbm38-201ENSMUST00000029014 1768 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Trim33Q99PP7 Irx5-202ENSMUST00000210246 2550 ntTSL 5 BASIC19.49■□□□□ 0.71
Trim33Q99PP7 Arid1b-201ENSMUST00000092723 7150 ntAPPRIS ALT2 TSL 5 BASIC19.49■□□□□ 0.71
Trim33Q99PP7 Trp73os-201ENSMUST00000143429 2192 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Trim33Q99PP7 Carm1-202ENSMUST00000115394 3320 ntAPPRIS ALT2 TSL 5 BASIC19.49■□□□□ 0.71
Trim33Q99PP7 Zfyve9-202ENSMUST00000106657 6459 ntAPPRIS P2 TSL 5 BASIC19.49■□□□□ 0.71
Trim33Q99PP7 C1qtnf4-201ENSMUST00000111466 1290 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Trim33Q99PP7 Tor3a-208ENSMUST00000190607 453 ntTSL 3 BASIC19.49■□□□□ 0.71
Trim33Q99PP7 Polr1d-201ENSMUST00000050970 1196 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Trim33Q99PP7 Proca1-201ENSMUST00000060539 960 ntAPPRIS ALT2 TSL 2 BASIC19.49■□□□□ 0.71
Trim33Q99PP7 Hccs-202ENSMUST00000112115 2473 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Trim33Q99PP7 Bag5-202ENSMUST00000160576 1852 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Trim33Q99PP7 Tex264-202ENSMUST00000163441 1896 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Trim33Q99PP7 Rem2-202ENSMUST00000164766 1884 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Trim33Q99PP7 Rhno1-203ENSMUST00000112152 2015 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Trim33Q99PP7 Naa20-202ENSMUST00000110000 1142 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Trim33Q99PP7 Gm6569-201ENSMUST00000154520 811 ntAPPRIS P1 TSL 3 BASIC19.48■□□□□ 0.71
Trim33Q99PP7 Cox5b-204ENSMUST00000193210 865 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Trim33Q99PP7 AC138214.1-201ENSMUST00000223838 420 ntAPPRIS P1 BASIC19.48■□□□□ 0.71
Trim33Q99PP7 Pdp1-204ENSMUST00000108299 2588 ntAPPRIS ALT2 TSL 2 BASIC19.48■□□□□ 0.71
Trim33Q99PP7 Gm9828-202ENSMUST00000126622 1446 ntTSL 3 BASIC19.48■□□□□ 0.71
Trim33Q99PP7 Ercc6l2-208ENSMUST00000144763 1820 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Trim33Q99PP7 Gbx2-201ENSMUST00000036954 2135 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Trim33Q99PP7 Cep78-201ENSMUST00000047704 2548 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Trim33Q99PP7 Trak1-208ENSMUST00000210636 2197 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Trim33Q99PP7 Olig1-201ENSMUST00000056882 2162 ntAPPRIS P1 BASIC19.47■□□□□ 0.71
Trim33Q99PP7 Ift57-201ENSMUST00000046777 2601 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Trim33Q99PP7 Ripply3-201ENSMUST00000023660 1531 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Trim33Q99PP7 Crlf3-203ENSMUST00000103233 2230 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Trim33Q99PP7 Gm10382-201ENSMUST00000100700 1233 ntAPPRIS P1 BASIC19.47■□□□□ 0.71
Trim33Q99PP7 Igfbp7-202ENSMUST00000163898 1200 ntAPPRIS P4 TSL 5 BASIC19.47■□□□□ 0.71
Trim33Q99PP7 0610039K10Rik-202ENSMUST00000184724 952 ntBASIC19.47■□□□□ 0.71
Trim33Q99PP7 Kcnma1-215ENSMUST00000190339 890 ntTSL 5 BASIC19.47■□□□□ 0.71
Trim33Q99PP7 Rfxap-204ENSMUST00000217267 696 ntAPPRIS P2 TSL 1 (best) BASIC19.47■□□□□ 0.71
Trim33Q99PP7 Traf3-203ENSMUST00000117269 6972 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Trim33Q99PP7 Ccdc85c-201ENSMUST00000136175 1302 ntAPPRIS ALT2 TSL 5 BASIC19.47■□□□□ 0.71
Trim33Q99PP7 Bicdl2-201ENSMUST00000062967 1913 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Trim33Q99PP7 Bhlhe23-201ENSMUST00000108878 2520 ntAPPRIS P1 BASIC19.47■□□□□ 0.71
Trim33Q99PP7 Wrnip1-201ENSMUST00000021832 2633 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Trim33Q99PP7 Ubxn1-202ENSMUST00000166407 1032 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Trim33Q99PP7 1700064M15Rik-201ENSMUST00000185726 645 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Trim33Q99PP7 Hr-203ENSMUST00000161069 5607 ntAPPRIS P2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Trim33Q99PP7 Lig3-204ENSMUST00000131537 1782 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Trim33Q99PP7 Lig3-209ENSMUST00000173009 1785 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Trim33Q99PP7 Cep170b-202ENSMUST00000101018 6641 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Retrieved 100 of 76,532 protein–RNA pairs in 103.8 ms