Protein–RNA interactions for Protein: Q8R4P5

Tmc1, Transmembrane channel-like protein 1, mousemouse

Predictions only

Length 757 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tmc1Q8R4P5 Dnaja4-202ENSMUST00000120452 1827 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
Tmc1Q8R4P5 Srsf6-202ENSMUST00000126163 515 ntTSL 5 BASIC24.26■■□□□ 1.47
Tmc1Q8R4P5 Zbtb7a-204ENSMUST00000121840 1676 ntTSL 1 (best) BASIC24.26■■□□□ 1.47
Tmc1Q8R4P5 Chtop-204ENSMUST00000107342 2411 ntTSL 1 (best) BASIC24.26■■□□□ 1.47
Tmc1Q8R4P5 Sept7-202ENSMUST00000165594 2516 ntAPPRIS P2 TSL 5 BASIC24.26■■□□□ 1.47
Tmc1Q8R4P5 Cacnb1-202ENSMUST00000092736 1880 ntTSL 1 (best) BASIC24.26■■□□□ 1.47
Tmc1Q8R4P5 Lrp3-202ENSMUST00000122409 4147 ntTSL 1 (best) BASIC24.25■■□□□ 1.47
Tmc1Q8R4P5 Barx2-201ENSMUST00000116615 1968 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
Tmc1Q8R4P5 Sigmar1-201ENSMUST00000059354 1640 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
Tmc1Q8R4P5 Dirc2-201ENSMUST00000023554 5395 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
Tmc1Q8R4P5 Relb-202ENSMUST00000094762 2209 ntAPPRIS P3 TSL 1 (best) BASIC24.25■■□□□ 1.47
Tmc1Q8R4P5 Relb-203ENSMUST00000098754 2203 ntAPPRIS ALT2 TSL 5 BASIC24.25■■□□□ 1.47
Tmc1Q8R4P5 Mras-201ENSMUST00000035045 4701 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
Tmc1Q8R4P5 Wnt11-205ENSMUST00000167303 1792 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
Tmc1Q8R4P5 Exosc4-201ENSMUST00000059045 1796 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
Tmc1Q8R4P5 Tmem120b-202ENSMUST00000111619 1256 ntTSL 1 (best) BASIC24.25■■□□□ 1.47
Tmc1Q8R4P5 H3f3a-207ENSMUST00000162814 724 ntAPPRIS P2 TSL 3 BASIC24.25■■□□□ 1.47
Tmc1Q8R4P5 Gm28417-201ENSMUST00000185218 785 ntTSL 3 BASIC24.25■■□□□ 1.47
Tmc1Q8R4P5 Cnnm1-201ENSMUST00000165311 5037 ntAPPRIS P2 TSL 1 (best) BASIC24.25■■□□□ 1.47
Tmc1Q8R4P5 Zdhhc5-201ENSMUST00000035840 4706 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
Tmc1Q8R4P5 Adamtsl5-201ENSMUST00000095446 1957 ntAPPRIS P1 TSL 5 BASIC24.25■■□□□ 1.47
Tmc1Q8R4P5 Zdhhc14-201ENSMUST00000089185 3115 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
Tmc1Q8R4P5 Sirt1-203ENSMUST00000120239 4430 ntAPPRIS P3 TSL 5 BASIC24.25■■□□□ 1.47
Tmc1Q8R4P5 Cstf2-202ENSMUST00000113286 2717 ntTSL 1 (best) BASIC24.25■■□□□ 1.47
Tmc1Q8R4P5 Fam20b-201ENSMUST00000086153 4414 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
Tmc1Q8R4P5 Anp32e-210ENSMUST00000171368 878 ntTSL 3 BASIC24.24■■□□□ 1.47
Tmc1Q8R4P5 Ncoa7-206ENSMUST00000215725 1445 ntTSL 1 (best) BASIC24.24■■□□□ 1.47
Tmc1Q8R4P5 Arpc5-202ENSMUST00000097536 1737 ntTSL 1 (best) BASIC24.24■■□□□ 1.47
Tmc1Q8R4P5 Fdxacb1-203ENSMUST00000176335 1817 ntTSL 1 (best) BASIC24.24■■□□□ 1.47
Tmc1Q8R4P5 Zfp692-202ENSMUST00000153510 1887 ntAPPRIS P1 TSL 5 BASIC24.24■■□□□ 1.47
Tmc1Q8R4P5 Cdk4-201ENSMUST00000006911 2053 ntAPPRIS P1 TSL 1 (best) BASIC24.23■■□□□ 1.47
Tmc1Q8R4P5 Fam193b-201ENSMUST00000021957 4341 ntAPPRIS P1 TSL 1 (best) BASIC24.23■■□□□ 1.47
Tmc1Q8R4P5 Auh-203ENSMUST00000119311 2627 ntTSL 1 (best) BASIC24.23■■□□□ 1.47
Tmc1Q8R4P5 Fkbp9-201ENSMUST00000031795 3009 ntAPPRIS P1 TSL 1 (best) BASIC24.23■■□□□ 1.47
Tmc1Q8R4P5 Ppp2r1b-209ENSMUST00000176349 1890 ntAPPRIS ALT2 TSL 5 BASIC24.23■■□□□ 1.47
Tmc1Q8R4P5 Kcnn4-201ENSMUST00000171904 1990 ntAPPRIS P1 TSL 1 (best) BASIC24.23■■□□□ 1.47
Tmc1Q8R4P5 Gfi1-203ENSMUST00000159164 2648 ntAPPRIS P3 TSL 1 (best) BASIC24.22■■□□□ 1.47
Tmc1Q8R4P5 Acvrl1-202ENSMUST00000117984 1852 ntAPPRIS P1 TSL 5 BASIC24.22■■□□□ 1.47
Tmc1Q8R4P5 Gm7417-201ENSMUST00000192950 473 ntBASIC24.22■■□□□ 1.47
Tmc1Q8R4P5 Gm9748-202ENSMUST00000194881 783 ntTSL 2 BASIC24.22■■□□□ 1.47
Tmc1Q8R4P5 Ppp1cb-206ENSMUST00000202078 383 ntTSL 5 BASIC24.22■■□□□ 1.47
Tmc1Q8R4P5 E2f1-202ENSMUST00000103145 2732 ntAPPRIS P3 TSL 1 (best) BASIC24.22■■□□□ 1.47
Tmc1Q8R4P5 Foxf1-201ENSMUST00000181504 2415 ntAPPRIS P1 TSL 1 (best) BASIC24.22■■□□□ 1.47
Tmc1Q8R4P5 Foxj3-206ENSMUST00000138845 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC24.21■■□□□ 1.47
Tmc1Q8R4P5 Atf1-201ENSMUST00000023769 2365 ntAPPRIS P1 TSL 1 (best) BASIC24.21■■□□□ 1.47
Tmc1Q8R4P5 Gm10620-201ENSMUST00000098379 1332 ntBASIC24.21■■□□□ 1.47
Tmc1Q8R4P5 Gadd45a-207ENSMUST00000204369 716 ntTSL 5 BASIC24.21■■□□□ 1.47
Tmc1Q8R4P5 Ptms-201ENSMUST00000032216 1149 ntAPPRIS P1 TSL 1 (best) BASIC24.21■■□□□ 1.47
Tmc1Q8R4P5 Plekhj1-201ENSMUST00000036805 1260 ntAPPRIS P1 TSL 1 (best) BASIC24.21■■□□□ 1.47
Tmc1Q8R4P5 Socs1-201ENSMUST00000038099 1220 ntAPPRIS P1 TSL 1 (best) BASIC24.21■■□□□ 1.47
Tmc1Q8R4P5 Zfp653-201ENSMUST00000043922 2108 ntAPPRIS P3 TSL 1 (best) BASIC24.21■■□□□ 1.47
Tmc1Q8R4P5 E4f1-205ENSMUST00000226941 2642 ntAPPRIS ALT2 BASIC24.21■■□□□ 1.47
Tmc1Q8R4P5 Chkb-201ENSMUST00000023289 1707 ntAPPRIS P1 TSL 1 (best) BASIC24.21■■□□□ 1.47
Tmc1Q8R4P5 Rab34-202ENSMUST00000056241 1558 ntTSL 5 BASIC24.2■■□□□ 1.47
Tmc1Q8R4P5 Cdk5r2-201ENSMUST00000160379 2799 ntAPPRIS P1 BASIC24.2■■□□□ 1.47
Tmc1Q8R4P5 Lgi2-202ENSMUST00000199942 6273 ntAPPRIS ALT2 TSL 1 (best) BASIC24.2■■□□□ 1.47
Tmc1Q8R4P5 Cpne2-201ENSMUST00000048653 2342 ntAPPRIS P2 TSL 1 (best) BASIC24.2■■□□□ 1.46
Tmc1Q8R4P5 Hist2h2ab-201ENSMUST00000073115 444 ntAPPRIS P1 BASIC24.2■■□□□ 1.46
Tmc1Q8R4P5 Pkig-202ENSMUST00000099105 640 ntAPPRIS P1 TSL 2 BASIC24.2■■□□□ 1.46
Tmc1Q8R4P5 Lpcat2-205ENSMUST00000210099 2179 ntTSL 1 (best) BASIC24.2■■□□□ 1.46
Tmc1Q8R4P5 Rin3-202ENSMUST00000101114 2394 ntTSL 1 (best) BASIC24.2■■□□□ 1.46
Tmc1Q8R4P5 Prss50-201ENSMUST00000051097 1456 ntAPPRIS P1 TSL 1 (best) BASIC24.19■■□□□ 1.46
Tmc1Q8R4P5 Tmem164-206ENSMUST00000112896 5224 ntAPPRIS P1 TSL 1 (best) BASIC24.19■■□□□ 1.46
Tmc1Q8R4P5 Aatf-201ENSMUST00000018841 1822 ntAPPRIS P1 TSL 1 (best) BASIC24.19■■□□□ 1.46
Tmc1Q8R4P5 Dedd2-201ENSMUST00000058702 1828 ntAPPRIS P1 TSL 1 (best) BASIC24.19■■□□□ 1.46
Tmc1Q8R4P5 Irx3-202ENSMUST00000175795 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC24.19■■□□□ 1.46
Tmc1Q8R4P5 Hs2st1-201ENSMUST00000043325 6177 ntAPPRIS P1 TSL 1 (best) BASIC24.19■■□□□ 1.46
Tmc1Q8R4P5 Rp9-203ENSMUST00000215715 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC24.19■■□□□ 1.46
Tmc1Q8R4P5 Cbx4-201ENSMUST00000026665 5179 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
Tmc1Q8R4P5 9530068E07Rik-202ENSMUST00000109057 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC24.18■■□□□ 1.46
Tmc1Q8R4P5 Gm4969-202ENSMUST00000141380 1892 ntAPPRIS P1 TSL 5 BASIC24.18■■□□□ 1.46
Tmc1Q8R4P5 Cpeb3-202ENSMUST00000123727 2411 ntAPPRIS ALT2 TSL 1 (best) BASIC24.18■■□□□ 1.46
Tmc1Q8R4P5 Pfdn4-204ENSMUST00000109148 736 ntTSL 3 BASIC24.18■■□□□ 1.46
Tmc1Q8R4P5 Asph-201ENSMUST00000038564 1174 ntTSL 1 (best) BASIC24.18■■□□□ 1.46
Tmc1Q8R4P5 Asph-205ENSMUST00000098275 1007 ntTSL 5 BASIC24.18■■□□□ 1.46
Tmc1Q8R4P5 Fbxl17-201ENSMUST00000024761 4925 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
Tmc1Q8R4P5 Acot3-203ENSMUST00000223080 1545 ntTSL 1 (best) BASIC24.18■■□□□ 1.46
Tmc1Q8R4P5 Gls2-201ENSMUST00000044776 2573 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
Tmc1Q8R4P5 Dlg3-201ENSMUST00000000901 4885 ntTSL 1 (best) BASIC24.18■■□□□ 1.46
Tmc1Q8R4P5 Dio3-202ENSMUST00000173014 2030 ntAPPRIS P1 BASIC24.17■■□□□ 1.46
Tmc1Q8R4P5 Gm2415-203ENSMUST00000149952 435 ntTSL 5 BASIC24.17■■□□□ 1.46
Tmc1Q8R4P5 Copz2-201ENSMUST00000018816 930 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
Tmc1Q8R4P5 Ammecr1-201ENSMUST00000041317 5437 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
Tmc1Q8R4P5 Azi2-205ENSMUST00000133580 2156 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
Tmc1Q8R4P5 AW047730-202ENSMUST00000181406 2579 ntTSL 1 (best) BASIC24.17■■□□□ 1.46
Tmc1Q8R4P5 Gnb2-201ENSMUST00000031726 1860 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
Tmc1Q8R4P5 Vim-206ENSMUST00000193675 1777 ntAPPRIS ALT2 TSL 5 BASIC24.16■■□□□ 1.46
Tmc1Q8R4P5 Clta-202ENSMUST00000107846 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC24.16■■□□□ 1.46
Tmc1Q8R4P5 Srsf4-202ENSMUST00000053819 2257 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
Tmc1Q8R4P5 Stoml2-201ENSMUST00000030169 1874 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
Tmc1Q8R4P5 Gm11837-201ENSMUST00000136992 876 ntTSL 2 BASIC24.16■■□□□ 1.46
Tmc1Q8R4P5 Gm35065-201ENSMUST00000199206 428 ntTSL 3 BASIC24.16■■□□□ 1.46
Tmc1Q8R4P5 Prss16-201ENSMUST00000006341 2155 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
Tmc1Q8R4P5 Magi2-206ENSMUST00000197443 6578 ntAPPRIS ALT2 TSL 5 BASIC24.16■■□□□ 1.46
Tmc1Q8R4P5 Tpst2-201ENSMUST00000031287 1835 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
Tmc1Q8R4P5 Cobll1-204ENSMUST00000112430 4917 ntAPPRIS ALT2 TSL 1 (best) BASIC24.15■■□□□ 1.46
Tmc1Q8R4P5 Bloc1s5-202ENSMUST00000224115 1020 ntBASIC24.15■■□□□ 1.46
Tmc1Q8R4P5 Hp1bp3-205ENSMUST00000105827 5155 ntAPPRIS ALT2 TSL 5 BASIC24.15■■□□□ 1.46
Tmc1Q8R4P5 Pianp-201ENSMUST00000032479 2250 ntAPPRIS P2 TSL 1 (best) BASIC24.15■■□□□ 1.46
Tmc1Q8R4P5 Pou2f2-205ENSMUST00000108417 1937 ntTSL 1 (best) BASIC24.15■■□□□ 1.46
Retrieved 100 of 76,532 protein–RNA pairs in 16.3 ms