Protein–RNA interactions for Protein: Q8R0W1

Cipc, CLOCK-interacting pacemaker, mousemouse

Predictions only

Length 432 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CipcQ8R0W1 Snrpa-201ENSMUST00000080356 1365 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CipcQ8R0W1 Rcan3-201ENSMUST00000030606 5111 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CipcQ8R0W1 Kifc3-201ENSMUST00000034240 3277 ntAPPRIS P4 TSL 1 (best) BASIC18.66■□□□□ 0.58
CipcQ8R0W1 Cav2-201ENSMUST00000000058 2733 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CipcQ8R0W1 6330403K07Rik-201ENSMUST00000156068 1494 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
CipcQ8R0W1 Hhex-201ENSMUST00000025944 1802 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CipcQ8R0W1 Sft2d3-201ENSMUST00000054984 2810 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
CipcQ8R0W1 Rell2-210ENSMUST00000176104 2150 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
CipcQ8R0W1 Alx3-201ENSMUST00000014747 1874 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CipcQ8R0W1 Rabgap1l-216ENSMUST00000195442 1877 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
CipcQ8R0W1 Tmem263-201ENSMUST00000095383 3616 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CipcQ8R0W1 Fah-201ENSMUST00000032865 1585 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CipcQ8R0W1 Cdkn2a-202ENSMUST00000107131 895 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CipcQ8R0W1 Gng5-203ENSMUST00000119130 593 ntTSL 2 BASIC18.65■□□□□ 0.58
CipcQ8R0W1 Pet117-201ENSMUST00000183618 693 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
CipcQ8R0W1 Gpatch3-201ENSMUST00000030662 2004 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CipcQ8R0W1 Tmtc1-201ENSMUST00000060095 8383 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CipcQ8R0W1 Mir155hg-202ENSMUST00000185662 1362 ntTSL 5 BASIC18.65■□□□□ 0.58
CipcQ8R0W1 Gm10125-201ENSMUST00000074702 2286 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
CipcQ8R0W1 Bola3-207ENSMUST00000136501 2312 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CipcQ8R0W1 Bhlhe23-201ENSMUST00000108878 2520 ntAPPRIS P1 BASIC18.64■□□□□ 0.57
CipcQ8R0W1 Trim47-201ENSMUST00000021120 2204 ntAPPRIS P4 TSL 1 (best) BASIC18.64■□□□□ 0.57
CipcQ8R0W1 Runx2-207ENSMUST00000160673 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
CipcQ8R0W1 Cdc20-201ENSMUST00000006565 1793 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CipcQ8R0W1 Gm8493-201ENSMUST00000196881 489 ntBASIC18.64■□□□□ 0.57
CipcQ8R0W1 Gm6139-201ENSMUST00000079261 882 ntBASIC18.64■□□□□ 0.57
CipcQ8R0W1 Calml3-201ENSMUST00000077698 1421 ntAPPRIS P1 BASIC18.64■□□□□ 0.57
CipcQ8R0W1 Ankrd9-204ENSMUST00000140788 1451 ntAPPRIS P2 TSL 3 BASIC18.64■□□□□ 0.57
CipcQ8R0W1 Gm15043-201ENSMUST00000118843 1543 ntBASIC18.64■□□□□ 0.57
CipcQ8R0W1 Celf6-202ENSMUST00000118164 1583 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
CipcQ8R0W1 Pold2-201ENSMUST00000102922 1646 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CipcQ8R0W1 Atg3-201ENSMUST00000023343 2057 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CipcQ8R0W1 D630036H23Rik-201ENSMUST00000171007 940 ntAPPRIS P1 BASIC18.63■□□□□ 0.57
CipcQ8R0W1 Smc6-201ENSMUST00000020931 5603 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CipcQ8R0W1 Ppa1-201ENSMUST00000020286 1364 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CipcQ8R0W1 Camk1-201ENSMUST00000032409 1496 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CipcQ8R0W1 Mark2-202ENSMUST00000032557 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
CipcQ8R0W1 Rgs19-201ENSMUST00000002532 1511 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CipcQ8R0W1 Hfe2-201ENSMUST00000049208 2028 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CipcQ8R0W1 Stim2-201ENSMUST00000117661 4934 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
CipcQ8R0W1 Ghitm-201ENSMUST00000042564 2573 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CipcQ8R0W1 Bola1-202ENSMUST00000107099 995 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
CipcQ8R0W1 Hotairm1-201ENSMUST00000129546 409 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
CipcQ8R0W1 Ly6h-206ENSMUST00000156032 752 ntAPPRIS P3 TSL 3 BASIC18.62■□□□□ 0.57
CipcQ8R0W1 Bola1-201ENSMUST00000016087 729 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CipcQ8R0W1 Bola1-203ENSMUST00000177442 692 ntAPPRIS P1 TSL 3 BASIC18.62■□□□□ 0.57
CipcQ8R0W1 Ly6h-201ENSMUST00000023241 906 ntAPPRIS ALT1 TSL 2 BASIC18.62■□□□□ 0.57
CipcQ8R0W1 Bag1-202ENSMUST00000108089 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
CipcQ8R0W1 Exosc4-201ENSMUST00000059045 1796 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CipcQ8R0W1 Mpz-201ENSMUST00000070758 2002 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CipcQ8R0W1 Barhl1-203ENSMUST00000113849 2102 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CipcQ8R0W1 Hccs-202ENSMUST00000112115 2473 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CipcQ8R0W1 Cnp-201ENSMUST00000103120 2357 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CipcQ8R0W1 AC123857.1-201ENSMUST00000181053 2312 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
CipcQ8R0W1 Lsm12-201ENSMUST00000021297 2256 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CipcQ8R0W1 Olig1-201ENSMUST00000056882 2162 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
CipcQ8R0W1 Ntn5-202ENSMUST00000182750 1758 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CipcQ8R0W1 Srp19-202ENSMUST00000119329 613 ntTSL 2 BASIC18.61■□□□□ 0.57
CipcQ8R0W1 Gm43017-201ENSMUST00000198296 752 ntBASIC18.61■□□□□ 0.57
CipcQ8R0W1 Nol7-205ENSMUST00000222499 756 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
CipcQ8R0W1 Slc25a41-201ENSMUST00000058661 1225 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
CipcQ8R0W1 En2-201ENSMUST00000036177 3539 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CipcQ8R0W1 Gm9817-201ENSMUST00000054395 2531 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
CipcQ8R0W1 Slc39a7-203ENSMUST00000169397 2107 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
CipcQ8R0W1 Spsb3-204ENSMUST00000119829 1955 ntAPPRIS ALT2 TSL 2 BASIC18.61■□□□□ 0.57
CipcQ8R0W1 Doc2a-201ENSMUST00000064110 2538 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CipcQ8R0W1 C2cd4a-201ENSMUST00000054500 1395 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
CipcQ8R0W1 Crlf3-203ENSMUST00000103233 2230 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
CipcQ8R0W1 Arpc2-202ENSMUST00000113819 1313 ntTSL 5 BASIC18.6■□□□□ 0.57
CipcQ8R0W1 Fbxl15-202ENSMUST00000177667 1243 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CipcQ8R0W1 Gm9922-201ENSMUST00000066461 435 ntAPPRIS P1 BASIC18.6■□□□□ 0.57
CipcQ8R0W1 Gm1673-201ENSMUST00000094869 477 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
CipcQ8R0W1 Bcl10-201ENSMUST00000029842 1949 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CipcQ8R0W1 Thap11-201ENSMUST00000040445 1819 ntAPPRIS P1 BASIC18.6■□□□□ 0.57
CipcQ8R0W1 Phc2-202ENSMUST00000106079 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
CipcQ8R0W1 Cotl1-202ENSMUST00000168698 1520 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CipcQ8R0W1 Tinagl1-202ENSMUST00000105998 1976 ntAPPRIS P2 TSL 1 (best) BASIC18.59■□□□□ 0.57
CipcQ8R0W1 Ache-209ENSMUST00000196208 1911 ntTSL 5 BASIC18.59■□□□□ 0.57
CipcQ8R0W1 Dgat1-201ENSMUST00000023214 1888 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CipcQ8R0W1 Prodh-206ENSMUST00000139861 677 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
CipcQ8R0W1 Pigx-210ENSMUST00000155966 963 ntAPPRIS ALT2 TSL 2 BASIC18.59■□□□□ 0.57
CipcQ8R0W1 Gm7160-202ENSMUST00000188519 1027 ntBASIC18.59■□□□□ 0.57
CipcQ8R0W1 D830025C05Rik-201ENSMUST00000059474 976 ntBASIC18.59■□□□□ 0.57
CipcQ8R0W1 Lig3-204ENSMUST00000131537 1782 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
CipcQ8R0W1 Lig3-209ENSMUST00000173009 1785 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
CipcQ8R0W1 Bspry-201ENSMUST00000030088 1757 ntAPPRIS P2 TSL 1 (best) BASIC18.59■□□□□ 0.57
CipcQ8R0W1 Ankrd33b-202ENSMUST00000076942 1641 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
CipcQ8R0W1 Ntf5-201ENSMUST00000058879 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CipcQ8R0W1 Arid1b-201ENSMUST00000092723 7150 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
CipcQ8R0W1 Crtc2-201ENSMUST00000029545 2747 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
CipcQ8R0W1 Kdelr3-201ENSMUST00000010974 1414 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
CipcQ8R0W1 Gga2-201ENSMUST00000033160 4915 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
CipcQ8R0W1 Art5-204ENSMUST00000106937 1713 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
CipcQ8R0W1 Gmds-201ENSMUST00000041859 1713 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
CipcQ8R0W1 Sh3gl1-201ENSMUST00000003268 2072 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
CipcQ8R0W1 Tarbp2-202ENSMUST00000100168 1278 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
CipcQ8R0W1 Knstrn-202ENSMUST00000110842 925 ntAPPRIS ALT2 TSL 3 BASIC18.58■□□□□ 0.56
CipcQ8R0W1 Gclm-206ENSMUST00000178826 1002 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.56
CipcQ8R0W1 Gm34220-201ENSMUST00000223001 2709 ntBASIC18.58■□□□□ 0.56
CipcQ8R0W1 Tomm40-201ENSMUST00000032555 1646 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Retrieved 100 of 76,532 protein–RNA pairs in 14.3 ms