Protein–RNA interactions for Protein: Q8CDW1

Fam228a, Protein FAM228A, mousemouse

Predictions only

Length 299 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fam228aQ8CDW1 Gng12-206ENSMUST00000114227 1125 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Fam228aQ8CDW1 4930524J08Rik-201ENSMUST00000046721 603 ntAPPRIS P1 BASIC20.79■□□□□ 0.92
Fam228aQ8CDW1 Tmem41a-201ENSMUST00000023562 1359 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Fam228aQ8CDW1 Lfng-201ENSMUST00000031555 2305 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Fam228aQ8CDW1 Becn1-217ENSMUST00000172233 1493 ntTSL 5 BASIC20.79■□□□□ 0.92
Fam228aQ8CDW1 Cracr2b-201ENSMUST00000053670 1698 ntAPPRIS P2 TSL 1 (best) BASIC20.79■□□□□ 0.92
Fam228aQ8CDW1 Bnc2-214ENSMUST00000176612 3963 ntTSL 5 BASIC20.79■□□□□ 0.92
Fam228aQ8CDW1 Stk3-202ENSMUST00000067033 2471 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Fam228aQ8CDW1 Ankrd40-203ENSMUST00000107818 3487 ntAPPRIS P3 TSL 5 BASIC20.79■□□□□ 0.92
Fam228aQ8CDW1 1700095J03Rik-201ENSMUST00000143715 1808 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Fam228aQ8CDW1 Sstr1-201ENSMUST00000044299 2014 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Fam228aQ8CDW1 Magi2-203ENSMUST00000115267 4478 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Fam228aQ8CDW1 Tmem250-ps-201ENSMUST00000133808 2483 ntTSL 2 BASIC20.78■□□□□ 0.92
Fam228aQ8CDW1 Rusc2-201ENSMUST00000035645 5300 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Fam228aQ8CDW1 Tmem238-201ENSMUST00000168578 1375 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Fam228aQ8CDW1 A830092H15Rik-201ENSMUST00000099182 1229 ntBASIC20.78■□□□□ 0.92
Fam228aQ8CDW1 Fbxo45-201ENSMUST00000042732 4179 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Fam228aQ8CDW1 Syt7-203ENSMUST00000169121 6834 ntTSL 5 BASIC20.78■□□□□ 0.92
Fam228aQ8CDW1 Epdr1-201ENSMUST00000002885 2363 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Fam228aQ8CDW1 Tmtc1-202ENSMUST00000100772 8269 ntTSL 2 BASIC20.77■□□□□ 0.92
Fam228aQ8CDW1 Gnb2-201ENSMUST00000031726 1860 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Fam228aQ8CDW1 Tk2-201ENSMUST00000050211 2406 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Fam228aQ8CDW1 Nphp3-201ENSMUST00000035167 5899 ntAPPRIS P2 TSL 1 (best) BASIC20.77■□□□□ 0.92
Fam228aQ8CDW1 Gyg-201ENSMUST00000118015 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
Fam228aQ8CDW1 Dtnb-225ENSMUST00000174663 2381 ntAPPRIS ALT2 TSL 5 BASIC20.77■□□□□ 0.92
Fam228aQ8CDW1 Neurl1b-202ENSMUST00000182897 1231 ntTSL 5 BASIC20.77■□□□□ 0.92
Fam228aQ8CDW1 Gm18190-203ENSMUST00000209944 389 ntTSL 2 BASIC20.77■□□□□ 0.92
Fam228aQ8CDW1 Coprs-201ENSMUST00000033839 793 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Fam228aQ8CDW1 Rasgef1a-201ENSMUST00000164960 3284 ntAPPRIS ALT2 TSL 5 BASIC20.77■□□□□ 0.92
Fam228aQ8CDW1 Ccdc50-201ENSMUST00000039443 2192 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
Fam228aQ8CDW1 1700008J07Rik-201ENSMUST00000185351 2432 ntBASIC20.77■□□□□ 0.92
Fam228aQ8CDW1 Tsen54-202ENSMUST00000106481 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
Fam228aQ8CDW1 Cstf2-202ENSMUST00000113286 2717 ntTSL 1 (best) BASIC20.77■□□□□ 0.91
Fam228aQ8CDW1 Gjc2-201ENSMUST00000108790 2169 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Fam228aQ8CDW1 Pdzd3-201ENSMUST00000034618 2193 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Fam228aQ8CDW1 Igf2bp2-201ENSMUST00000100052 3899 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Fam228aQ8CDW1 Hexa-201ENSMUST00000026262 1996 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Fam228aQ8CDW1 Zmym3-207ENSMUST00000120201 1859 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Fam228aQ8CDW1 Tfpt-204ENSMUST00000155592 1091 ntAPPRIS P3 TSL 1 (best) BASIC20.76■□□□□ 0.91
Fam228aQ8CDW1 Emc8-208ENSMUST00000181950 747 ntTSL 2 BASIC20.76■□□□□ 0.91
Fam228aQ8CDW1 Acot3-203ENSMUST00000223080 1545 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Fam228aQ8CDW1 Dnajb11-201ENSMUST00000004574 1927 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Fam228aQ8CDW1 Samd10-201ENSMUST00000060173 2164 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Fam228aQ8CDW1 Abhd13-202ENSMUST00000139793 5191 ntAPPRIS P1 TSL 2 BASIC20.76■□□□□ 0.91
Fam228aQ8CDW1 Fdxacb1-203ENSMUST00000176335 1817 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Fam228aQ8CDW1 Cd83-201ENSMUST00000015540 2477 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Fam228aQ8CDW1 Gm6802-201ENSMUST00000167843 1983 ntBASIC20.76■□□□□ 0.91
Fam228aQ8CDW1 Wnk2-210ENSMUST00000162403 6147 ntAPPRIS ALT2 TSL 5 BASIC20.75■□□□□ 0.91
Fam228aQ8CDW1 Zfyve9-202ENSMUST00000106657 6459 ntAPPRIS P2 TSL 5 BASIC20.75■□□□□ 0.91
Fam228aQ8CDW1 Pnldc1-201ENSMUST00000163394 1689 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Fam228aQ8CDW1 Gm12905-201ENSMUST00000153814 658 ntTSL 2 BASIC20.75■□□□□ 0.91
Fam228aQ8CDW1 Patz1-203ENSMUST00000094471 2930 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Fam228aQ8CDW1 Sos1-201ENSMUST00000068714 8919 ntAPPRIS P1 TSL 2 BASIC20.75■□□□□ 0.91
Fam228aQ8CDW1 Eml4-203ENSMUST00000112363 5238 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
Fam228aQ8CDW1 Luc7l2-201ENSMUST00000057692 2702 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Fam228aQ8CDW1 Psmg1-202ENSMUST00000117044 807 ntTSL 5 BASIC20.74■□□□□ 0.91
Fam228aQ8CDW1 Gm13238-201ENSMUST00000117655 780 ntBASIC20.74■□□□□ 0.91
Fam228aQ8CDW1 Gm6217-201ENSMUST00000222182 829 ntAPPRIS P1 BASIC20.74■□□□□ 0.91
Fam228aQ8CDW1 Gm7143-201ENSMUST00000222811 859 ntBASIC20.74■□□□□ 0.91
Fam228aQ8CDW1 Acvrl1-206ENSMUST00000121718 1906 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Fam228aQ8CDW1 Chtf8-201ENSMUST00000169312 2730 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Fam228aQ8CDW1 Tbc1d25-204ENSMUST00000172020 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
Fam228aQ8CDW1 Siglecf-206ENSMUST00000206299 2149 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
Fam228aQ8CDW1 Gfi1-203ENSMUST00000159164 2648 ntAPPRIS P3 TSL 1 (best) BASIC20.74■□□□□ 0.91
Fam228aQ8CDW1 Prmt1-202ENSMUST00000107843 1508 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Fam228aQ8CDW1 Snx5-202ENSMUST00000110030 2512 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Fam228aQ8CDW1 Meis3-201ENSMUST00000002495 1731 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Fam228aQ8CDW1 Matn4-203ENSMUST00000109358 2056 ntTSL 5 BASIC20.73■□□□□ 0.91
Fam228aQ8CDW1 Trim3-203ENSMUST00000106791 2466 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Fam228aQ8CDW1 Mprip-201ENSMUST00000066330 7765 ntAPPRIS ALT2 TSL 5 BASIC20.73■□□□□ 0.91
Fam228aQ8CDW1 Kcnn4-201ENSMUST00000171904 1990 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Fam228aQ8CDW1 Kl-201ENSMUST00000078856 5118 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Fam228aQ8CDW1 Dalrd3-201ENSMUST00000019183 1746 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Fam228aQ8CDW1 Msx1-201ENSMUST00000063116 1935 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Fam228aQ8CDW1 Cd37-204ENSMUST00000209779 2541 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Fam228aQ8CDW1 Rem2-201ENSMUST00000164697 1194 ntTSL 5 BASIC20.72■□□□□ 0.91
Fam228aQ8CDW1 Clta-206ENSMUST00000170241 1079 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
Fam228aQ8CDW1 Gm27151-202ENSMUST00000185015 1145 ntTSL 5 BASIC20.72■□□□□ 0.91
Fam228aQ8CDW1 Gm43566-201ENSMUST00000196851 808 ntBASIC20.72■□□□□ 0.91
Fam228aQ8CDW1 Cacnb1-202ENSMUST00000092736 1880 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Fam228aQ8CDW1 Nudt19-201ENSMUST00000040962 2298 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Fam228aQ8CDW1 Mtus2-205ENSMUST00000110515 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Fam228aQ8CDW1 Mex3d-201ENSMUST00000105350 3266 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Fam228aQ8CDW1 Slc9a6-201ENSMUST00000077741 4976 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Fam228aQ8CDW1 Adpgk-201ENSMUST00000026266 2464 ntAPPRIS ALT1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Fam228aQ8CDW1 Zdhhc14-201ENSMUST00000089185 3115 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Fam228aQ8CDW1 Ank1-202ENSMUST00000084038 8147 ntAPPRIS P3 TSL 1 (best) BASIC20.71■□□□□ 0.91
Fam228aQ8CDW1 Zbtb7a-204ENSMUST00000121840 1676 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Fam228aQ8CDW1 Wdsub1-202ENSMUST00000102751 1526 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Fam228aQ8CDW1 Hoxd3-201ENSMUST00000047830 2292 ntAPPRIS P1 TSL 5 BASIC20.71■□□□□ 0.91
Fam228aQ8CDW1 Hnrnpl-211ENSMUST00000174548 2679 ntAPPRIS P1 TSL 5 BASIC20.71■□□□□ 0.91
Fam228aQ8CDW1 Kirrel-201ENSMUST00000041732 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.91
Fam228aQ8CDW1 Dnaja4-201ENSMUST00000070070 3003 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Fam228aQ8CDW1 Ung-201ENSMUST00000031587 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
Fam228aQ8CDW1 Sept7-202ENSMUST00000165594 2516 ntAPPRIS P2 TSL 5 BASIC20.7■□□□□ 0.9
Fam228aQ8CDW1 Traf3-203ENSMUST00000117269 6972 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Fam228aQ8CDW1 Nudt6-204ENSMUST00000108118 935 ntTSL 5 BASIC20.7■□□□□ 0.9
Fam228aQ8CDW1 Nudt6-201ENSMUST00000052645 1155 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
Fam228aQ8CDW1 Nudt6-202ENSMUST00000099130 1070 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.9
Fam228aQ8CDW1 Ralgps2-205ENSMUST00000185198 2229 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Retrieved 100 of 76,532 protein–RNA pairs in 17.7 ms