Protein–RNA interactions for Protein: Q66PY1

Scube3, Signal peptide, CUB and EGF-like domain-containing protein 3, mousemouse

Predictions only

Length 993 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scube3Q66PY1 Pus1-203ENSMUST00000086643 1868 ntAPPRIS P4 TSL 1 (best) BASIC20.85■□□□□ 0.93
Scube3Q66PY1 Fbxw2-203ENSMUST00000113075 2260 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Scube3Q66PY1 Tekt5-201ENSMUST00000043415 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
Scube3Q66PY1 Hoxc11-201ENSMUST00000001701 2021 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Scube3Q66PY1 Arhgap23-201ENSMUST00000093940 2409 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Scube3Q66PY1 Laptm4a-201ENSMUST00000020909 1773 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Scube3Q66PY1 Rer1-201ENSMUST00000030914 1596 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Scube3Q66PY1 Lsm14a-201ENSMUST00000085585 2944 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Scube3Q66PY1 Adrm1-201ENSMUST00000061437 1535 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Scube3Q66PY1 Vmn1r17-205ENSMUST00000228342 2230 ntAPPRIS P2 BASIC20.84■□□□□ 0.93
Scube3Q66PY1 Hoxd4-202ENSMUST00000111980 1494 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Scube3Q66PY1 Pgam5-201ENSMUST00000059229 2044 ntAPPRIS P3 TSL 1 (best) BASIC20.84■□□□□ 0.93
Scube3Q66PY1 AC104834.1-201ENSMUST00000222611 1056 ntAPPRIS P1 BASIC20.84■□□□□ 0.93
Scube3Q66PY1 Grin2c-202ENSMUST00000106554 4895 ntAPPRIS P1 TSL 5 BASIC20.84■□□□□ 0.93
Scube3Q66PY1 Krtap5-3-202ENSMUST00000187512 1652 ntAPPRIS P2 BASIC20.83■□□□□ 0.93
Scube3Q66PY1 Hp1bp3-205ENSMUST00000105827 5155 ntAPPRIS ALT2 TSL 5 BASIC20.83■□□□□ 0.93
Scube3Q66PY1 Zfp639-202ENSMUST00000191783 1988 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Scube3Q66PY1 Sirt1-203ENSMUST00000120239 4430 ntAPPRIS P3 TSL 5 BASIC20.83■□□□□ 0.93
Scube3Q66PY1 Gng5-203ENSMUST00000119130 593 ntTSL 2 BASIC20.83■□□□□ 0.93
Scube3Q66PY1 4930539J05Rik-202ENSMUST00000182865 511 ntTSL 2 BASIC20.83■□□□□ 0.93
Scube3Q66PY1 Gm43173-201ENSMUST00000202246 593 ntBASIC20.83■□□□□ 0.93
Scube3Q66PY1 Selenoo-201ENSMUST00000082439 2383 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Scube3Q66PY1 Macrod2-207ENSMUST00000110067 4730 ntAPPRIS ALT2 TSL 5 BASIC20.83■□□□□ 0.92
Scube3Q66PY1 Jak2-202ENSMUST00000065796 5030 ntAPPRIS P1 TSL 5 BASIC20.83■□□□□ 0.92
Scube3Q66PY1 Paip2-203ENSMUST00000115735 1521 ntAPPRIS P1 TSL 5 BASIC20.83■□□□□ 0.92
Scube3Q66PY1 Cacnb1-202ENSMUST00000092736 1880 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Scube3Q66PY1 Rrad-201ENSMUST00000034351 1577 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Scube3Q66PY1 Hoxb6-202ENSMUST00000173432 1964 ntAPPRIS P1 TSL 5 BASIC20.82■□□□□ 0.92
Scube3Q66PY1 Slc35f3-201ENSMUST00000108759 2309 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Scube3Q66PY1 Ptpre-202ENSMUST00000209256 2593 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Scube3Q66PY1 1700026D11Rik-201ENSMUST00000126910 2033 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Scube3Q66PY1 Krtap5-2-202ENSMUST00000190456 1471 ntAPPRIS P2 BASIC20.81■□□□□ 0.92
Scube3Q66PY1 Nsfl1c-202ENSMUST00000089140 1486 ntAPPRIS P3 TSL 5 BASIC20.81■□□□□ 0.92
Scube3Q66PY1 Stmn4-201ENSMUST00000074523 1303 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Scube3Q66PY1 Baiap2-201ENSMUST00000026436 2394 ntAPPRIS P4 TSL 1 (best) BASIC20.81■□□□□ 0.92
Scube3Q66PY1 Ksr1-202ENSMUST00000108264 2748 ntTSL 5 BASIC20.81■□□□□ 0.92
Scube3Q66PY1 Agmat-201ENSMUST00000038161 1407 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Scube3Q66PY1 Tbxa2r-202ENSMUST00000220312 1919 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Scube3Q66PY1 Srsf1-202ENSMUST00000107920 1209 ntTSL 5 BASIC20.81■□□□□ 0.92
Scube3Q66PY1 Knstrn-202ENSMUST00000110842 925 ntAPPRIS ALT2 TSL 3 BASIC20.81■□□□□ 0.92
Scube3Q66PY1 Trnau1ap-201ENSMUST00000030730 1130 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Scube3Q66PY1 Dusp15-201ENSMUST00000037715 715 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Scube3Q66PY1 D830025C05Rik-201ENSMUST00000059474 976 ntBASIC20.81■□□□□ 0.92
Scube3Q66PY1 Stau2-201ENSMUST00000027052 2763 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Scube3Q66PY1 Cpne2-202ENSMUST00000109537 2121 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
Scube3Q66PY1 Jkamp-202ENSMUST00000117449 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
Scube3Q66PY1 Stoml2-201ENSMUST00000030169 1874 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Scube3Q66PY1 Cacnb1-203ENSMUST00000103144 2236 ntTSL 5 BASIC20.81■□□□□ 0.92
Scube3Q66PY1 4930412F12Rik-201ENSMUST00000211700 1471 ntBASIC20.81■□□□□ 0.92
Scube3Q66PY1 Rnaseh2b-201ENSMUST00000022499 1494 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Scube3Q66PY1 Mum1-201ENSMUST00000020365 2640 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Scube3Q66PY1 1810022K09Rik-201ENSMUST00000108365 559 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
Scube3Q66PY1 Thap8-201ENSMUST00000014072 1182 ntAPPRIS ALT2 TSL 5 BASIC20.8■□□□□ 0.92
Scube3Q66PY1 Gm43017-201ENSMUST00000198296 752 ntBASIC20.8■□□□□ 0.92
Scube3Q66PY1 Trmt112-201ENSMUST00000088257 957 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Scube3Q66PY1 Hpdl-201ENSMUST00000055436 1804 ntAPPRIS P1 BASIC20.8■□□□□ 0.92
Scube3Q66PY1 Spint1-202ENSMUST00000110816 1913 ntAPPRIS P1 TSL 5 BASIC20.8■□□□□ 0.92
Scube3Q66PY1 Pdcd2-205ENSMUST00000154293 1924 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Scube3Q66PY1 Ldb1-202ENSMUST00000056931 2295 ntAPPRIS P2 TSL 1 (best) BASIC20.79■□□□□ 0.92
Scube3Q66PY1 Otud5-203ENSMUST00000115666 2471 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
Scube3Q66PY1 Prrt1-201ENSMUST00000015620 1940 ntAPPRIS P1 TSL 5 BASIC20.79■□□□□ 0.92
Scube3Q66PY1 Dtymk-202ENSMUST00000112890 1055 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Scube3Q66PY1 Rps2-208ENSMUST00000170715 998 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Scube3Q66PY1 Gm29394-204ENSMUST00000177504 448 ntAPPRIS ALT2 TSL 3 BASIC20.79■□□□□ 0.92
Scube3Q66PY1 Hsf1-207ENSMUST00000228371 2102 ntBASIC20.79■□□□□ 0.92
Scube3Q66PY1 Glrx5-201ENSMUST00000021522 2925 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Scube3Q66PY1 Syap1-201ENSMUST00000033723 2087 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Scube3Q66PY1 Rab28-203ENSMUST00000201422 1697 ntTSL 5 BASIC20.78■□□□□ 0.92
Scube3Q66PY1 Aktip-201ENSMUST00000109609 1171 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Scube3Q66PY1 Ntsr2-202ENSMUST00000220892 846 ntTSL 3 BASIC20.78■□□□□ 0.92
Scube3Q66PY1 Rps7-203ENSMUST00000221871 820 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Scube3Q66PY1 Kctd20-204ENSMUST00000122163 2423 ntAPPRIS P1 TSL 5 BASIC20.78■□□□□ 0.92
Scube3Q66PY1 Aplp1-201ENSMUST00000006828 2343 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Scube3Q66PY1 Uckl1os-201ENSMUST00000122831 2018 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Scube3Q66PY1 Reep6-207ENSMUST00000186864 2015 ntAPPRIS P3 TSL 1 (best) BASIC20.78■□□□□ 0.92
Scube3Q66PY1 Triobp-202ENSMUST00000109688 2553 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
Scube3Q66PY1 Zfp467-202ENSMUST00000114556 2287 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Scube3Q66PY1 Arpc2-202ENSMUST00000113819 1313 ntTSL 5 BASIC20.78■□□□□ 0.92
Scube3Q66PY1 Parl-201ENSMUST00000048642 1348 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Scube3Q66PY1 Ptger3-202ENSMUST00000173533 2097 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
Scube3Q66PY1 Stx3-202ENSMUST00000069285 2810 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Scube3Q66PY1 Kcng2-201ENSMUST00000077962 2813 ntAPPRIS P1 TSL 5 BASIC20.77■□□□□ 0.92
Scube3Q66PY1 Msl3l2-201ENSMUST00000063138 2140 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Scube3Q66PY1 Gm20163-202ENSMUST00000212288 989 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
Scube3Q66PY1 Nol7-205ENSMUST00000222499 756 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
Scube3Q66PY1 AC164441.1-202ENSMUST00000223430 442 ntTSL 2 BASIC20.77■□□□□ 0.92
Scube3Q66PY1 Krtap5-4-201ENSMUST00000061403 1046 ntAPPRIS P1 BASIC20.77■□□□□ 0.92
Scube3Q66PY1 Asphd1-203ENSMUST00000106340 1647 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
Scube3Q66PY1 Tmem230-206ENSMUST00000180286 1531 ntAPPRIS P1 TSL 2 BASIC20.77■□□□□ 0.92
Scube3Q66PY1 Stau2-217ENSMUST00000162751 3030 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
Scube3Q66PY1 Sfmbt2-204ENSMUST00000114864 1901 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Scube3Q66PY1 Dtnb-216ENSMUST00000173736 2175 ntAPPRIS ALT2 TSL 5 BASIC20.76■□□□□ 0.91
Scube3Q66PY1 Skor2-201ENSMUST00000166956 3141 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Scube3Q66PY1 1700030C10Rik-201ENSMUST00000110971 1471 ntBASIC20.76■□□□□ 0.91
Scube3Q66PY1 Dvl1-201ENSMUST00000030948 3358 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Scube3Q66PY1 Gm26682-201ENSMUST00000180850 1729 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Scube3Q66PY1 Tm9sf3-201ENSMUST00000025989 6144 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Scube3Q66PY1 Kiss1-204ENSMUST00000194044 583 ntAPPRIS P1 TSL 2 BASIC20.76■□□□□ 0.91
Scube3Q66PY1 Kctd17-201ENSMUST00000089414 1180 ntAPPRIS ALT2 TSL 5 BASIC20.76■□□□□ 0.91
Scube3Q66PY1 Fam96b-201ENSMUST00000093234 639 ntTSL 5 BASIC20.76■□□□□ 0.91
Retrieved 100 of 76,532 protein–RNA pairs in 90.4 ms