Protein–RNA interactions for Protein: Q3UAW9

Brf2, Transcription factor IIIB 50 kDa subunit, mousemouse

Predictions only

Length 420 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Brf2Q3UAW9 Fdxacb1-203ENSMUST00000176335 1817 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Brf2Q3UAW9 Tmem59-202ENSMUST00000106753 1148 ntTSL 5 BASIC18.66■□□□□ 0.58
Brf2Q3UAW9 Krt8-ps-201ENSMUST00000208495 945 ntBASIC18.66■□□□□ 0.58
Brf2Q3UAW9 Dgcr6-201ENSMUST00000066027 1050 ntAPPRIS P4 TSL 2 BASIC18.66■□□□□ 0.58
Brf2Q3UAW9 Whrn-204ENSMUST00000095037 2419 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Brf2Q3UAW9 Emc10-201ENSMUST00000118515 1662 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Brf2Q3UAW9 Hoxc11-201ENSMUST00000001701 2021 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Brf2Q3UAW9 Npr3-205ENSMUST00000228603 2437 ntAPPRIS ALT2 BASIC18.65■□□□□ 0.58
Brf2Q3UAW9 Sae1-201ENSMUST00000094815 1875 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Brf2Q3UAW9 Wnk2-202ENSMUST00000049265 6738 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
Brf2Q3UAW9 Brpf3-201ENSMUST00000004985 5766 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Brf2Q3UAW9 Gm14424-201ENSMUST00000143191 895 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Brf2Q3UAW9 Uba5-201ENSMUST00000035166 2404 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Brf2Q3UAW9 Kifc3-201ENSMUST00000034240 3277 ntAPPRIS P4 TSL 1 (best) BASIC18.65■□□□□ 0.58
Brf2Q3UAW9 Rell2-212ENSMUST00000177058 1762 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
Brf2Q3UAW9 Nr0b1-201ENSMUST00000026036 1808 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Brf2Q3UAW9 Ncoa7-206ENSMUST00000215725 1445 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Brf2Q3UAW9 Stau2-201ENSMUST00000027052 2763 ntTSL 1 (best) BASIC18.64■□□□□ 0.58
Brf2Q3UAW9 Pink1-201ENSMUST00000030536 2375 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.58
Brf2Q3UAW9 Kctd20-204ENSMUST00000122163 2423 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.58
Brf2Q3UAW9 Tedc1-201ENSMUST00000049271 2441 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
Brf2Q3UAW9 Sptbn4-207ENSMUST00000172269 8737 ntAPPRIS ALT2 TSL 2 BASIC18.64■□□□□ 0.58
Brf2Q3UAW9 Zmym3-202ENSMUST00000117637 1593 ntTSL 1 (best) BASIC18.64■□□□□ 0.58
Brf2Q3UAW9 Pgam5-201ENSMUST00000059229 2044 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.58
Brf2Q3UAW9 Rxrb-201ENSMUST00000044858 2623 ntAPPRIS P4 TSL 1 (best) BASIC18.64■□□□□ 0.57
Brf2Q3UAW9 Dhx33-204ENSMUST00000124464 1835 ntTSL 5 BASIC18.64■□□□□ 0.57
Brf2Q3UAW9 Ints6-201ENSMUST00000053959 4993 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Brf2Q3UAW9 Zcchc24-201ENSMUST00000069180 4556 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Brf2Q3UAW9 Uckl1os-201ENSMUST00000122831 2018 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Brf2Q3UAW9 Notumos-201ENSMUST00000151998 2659 ntBASIC18.64■□□□□ 0.57
Brf2Q3UAW9 Nrg3-203ENSMUST00000173780 2137 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.57
Brf2Q3UAW9 Lmtk3-204ENSMUST00000209617 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Brf2Q3UAW9 Ung-201ENSMUST00000031587 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Brf2Q3UAW9 Ung-202ENSMUST00000102584 2136 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
Brf2Q3UAW9 Stard4-203ENSMUST00000119991 941 ntTSL 5 BASIC18.63■□□□□ 0.57
Brf2Q3UAW9 Vgf-202ENSMUST00000186451 2277 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
Brf2Q3UAW9 Lacc1-201ENSMUST00000062789 2444 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Brf2Q3UAW9 Grsf1-201ENSMUST00000078945 2538 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Brf2Q3UAW9 Gm15043-201ENSMUST00000118843 1543 ntBASIC18.63■□□□□ 0.57
Brf2Q3UAW9 Oxsr1-201ENSMUST00000040853 4647 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Brf2Q3UAW9 Gm7102-201ENSMUST00000180168 1624 ntAPPRIS P1 BASIC18.63■□□□□ 0.57
Brf2Q3UAW9 Gm43909-201ENSMUST00000203443 1876 ntBASIC18.63■□□□□ 0.57
Brf2Q3UAW9 Matr3-209ENSMUST00000188275 1951 ntTSL 5 BASIC18.62■□□□□ 0.57
Brf2Q3UAW9 Gm8770-201ENSMUST00000121113 1109 ntBASIC18.62■□□□□ 0.57
Brf2Q3UAW9 Hsd17b3-202ENSMUST00000166224 1286 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
Brf2Q3UAW9 Casd1-204ENSMUST00000181734 1063 ntTSL 5 BASIC18.62■□□□□ 0.57
Brf2Q3UAW9 Gm43759-201ENSMUST00000196925 1261 ntBASIC18.62■□□□□ 0.57
Brf2Q3UAW9 Fgfr1-215ENSMUST00000179592 5041 ntTSL 5 BASIC18.62■□□□□ 0.57
Brf2Q3UAW9 Ccdc34-201ENSMUST00000028580 2070 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Brf2Q3UAW9 Irx2-201ENSMUST00000074372 2625 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Brf2Q3UAW9 Sec24b-201ENSMUST00000001079 5128 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Brf2Q3UAW9 Zmiz2-201ENSMUST00000012612 4199 ntAPPRIS P2 TSL 5 BASIC18.61■□□□□ 0.57
Brf2Q3UAW9 Rasef-203ENSMUST00000222414 2127 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
Brf2Q3UAW9 Gm15441-202ENSMUST00000107095 1653 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Brf2Q3UAW9 Zbtb7a-204ENSMUST00000121840 1676 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Brf2Q3UAW9 Tcte2-209ENSMUST00000143162 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Brf2Q3UAW9 AC161180.2-201ENSMUST00000222567 1015 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
Brf2Q3UAW9 Kmt5b-201ENSMUST00000005518 1283 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
Brf2Q3UAW9 Cep170b-202ENSMUST00000101018 6641 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Brf2Q3UAW9 Arhgap23-201ENSMUST00000093940 2409 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Brf2Q3UAW9 P2ry2-202ENSMUST00000178340 2137 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Brf2Q3UAW9 Arhgdia-202ENSMUST00000106197 1867 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Brf2Q3UAW9 Bag5-202ENSMUST00000160576 1852 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Brf2Q3UAW9 Wnk2-201ENSMUST00000035538 6630 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Brf2Q3UAW9 D830036C21Rik-202ENSMUST00000208263 1548 ntBASIC18.6■□□□□ 0.57
Brf2Q3UAW9 Fgfr2-217ENSMUST00000124096 2425 ntTSL 5 BASIC18.6■□□□□ 0.57
Brf2Q3UAW9 Catsper2-201ENSMUST00000038073 2247 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Brf2Q3UAW9 Nkx6-2-202ENSMUST00000106095 1299 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Brf2Q3UAW9 4930439D14Rik-201ENSMUST00000186765 359 ntBASIC18.6■□□□□ 0.57
Brf2Q3UAW9 Tmem79-202ENSMUST00000107552 2063 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
Brf2Q3UAW9 Cdkl3-204ENSMUST00000109077 2605 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
Brf2Q3UAW9 Paip1-201ENSMUST00000026520 2551 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
Brf2Q3UAW9 Baz1a-201ENSMUST00000038926 6188 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
Brf2Q3UAW9 Zfp618-201ENSMUST00000030043 1582 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Brf2Q3UAW9 Eml2-202ENSMUST00000117338 2765 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
Brf2Q3UAW9 Mfsd4a-202ENSMUST00000112365 1536 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
Brf2Q3UAW9 Asph-217ENSMUST00000146441 2576 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Brf2Q3UAW9 Otud5-203ENSMUST00000115666 2471 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Brf2Q3UAW9 Slc35a2-209ENSMUST00000208397 1374 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
Brf2Q3UAW9 Pbx1-206ENSMUST00000176790 1828 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Brf2Q3UAW9 Smox-205ENSMUST00000110182 985 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Brf2Q3UAW9 Lig3-204ENSMUST00000131537 1782 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Brf2Q3UAW9 Rbm7-201ENSMUST00000170000 1773 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Brf2Q3UAW9 Lig3-209ENSMUST00000173009 1785 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Brf2Q3UAW9 Tomm40-201ENSMUST00000032555 1646 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Brf2Q3UAW9 Ccnd3-218ENSMUST00000183177 2060 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
Brf2Q3UAW9 Nphp3-201ENSMUST00000035167 5899 ntAPPRIS P2 TSL 1 (best) BASIC18.58■□□□□ 0.57
Brf2Q3UAW9 Ndel1-201ENSMUST00000018880 2382 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Brf2Q3UAW9 Zfp963-202ENSMUST00000154063 640 ntTSL 3 BASIC18.58■□□□□ 0.56
Brf2Q3UAW9 H3f3a-207ENSMUST00000162814 724 ntAPPRIS P2 TSL 3 BASIC18.58■□□□□ 0.56
Brf2Q3UAW9 Dctn3-203ENSMUST00000171641 885 ntTSL 3 BASIC18.58■□□□□ 0.56
Brf2Q3UAW9 Sumf1-206ENSMUST00000172188 723 ntTSL 5 BASIC18.58■□□□□ 0.56
Brf2Q3UAW9 C1ql4-201ENSMUST00000064462 874 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Brf2Q3UAW9 Gm10645-201ENSMUST00000098605 1090 ntAPPRIS P1 BASIC18.58■□□□□ 0.56
Brf2Q3UAW9 Arid1b-201ENSMUST00000092723 7150 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.56
Brf2Q3UAW9 Hr-203ENSMUST00000161069 5607 ntAPPRIS P2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Brf2Q3UAW9 Desi2-204ENSMUST00000161075 2590 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Brf2Q3UAW9 Zfp335os-201ENSMUST00000129364 1127 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Brf2Q3UAW9 Gm26558-201ENSMUST00000180559 861 ntAPPRIS P1 BASIC18.57■□□□□ 0.56
Brf2Q3UAW9 Lpcat3-201ENSMUST00000004381 2281 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Retrieved 100 of 76,532 protein–RNA pairs in 25.8 ms