Protein–RNA interactions for Protein: P09026

Hoxb3, Homeobox protein Hox-B3, mousemouse

Predictions only

Length 433 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxb3P09026 2210408F21Rik-208ENSMUST00000144612 450 ntTSL 3 BASIC19.75■□□□□ 0.75
Hoxb3P09026 Samd13-205ENSMUST00000197989 591 ntTSL 5 BASIC19.75■□□□□ 0.75
Hoxb3P09026 Gm4881-201ENSMUST00000206705 1152 ntAPPRIS P1 TSL 5 BASIC19.75■□□□□ 0.75
Hoxb3P09026 Stard10-211ENSMUST00000210192 1258 ntAPPRIS P1 TSL 5 BASIC19.75■□□□□ 0.75
Hoxb3P09026 Art5-204ENSMUST00000106937 1713 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Hoxb3P09026 Ube2q1-201ENSMUST00000038356 3077 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Hoxb3P09026 Rnf8-201ENSMUST00000024817 2077 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Hoxb3P09026 Dcaf15-201ENSMUST00000041367 2312 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Hoxb3P09026 Pth1r-201ENSMUST00000006005 2307 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Hoxb3P09026 AC122428.2-201ENSMUST00000216321 1832 ntBASIC19.74■□□□□ 0.75
Hoxb3P09026 Krt8-201ENSMUST00000023952 1805 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Hoxb3P09026 Foxk2-201ENSMUST00000106113 5029 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Hoxb3P09026 Msl1-203ENSMUST00000107485 2091 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Hoxb3P09026 Utp11-201ENSMUST00000030738 1603 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Hoxb3P09026 1700016H13Rik-203ENSMUST00000120108 797 ntAPPRIS P1 TSL 2 BASIC19.74■□□□□ 0.75
Hoxb3P09026 Gm20621-202ENSMUST00000176618 1234 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Hoxb3P09026 Gm27741-201ENSMUST00000185060 237 ntBASIC19.74■□□□□ 0.75
Hoxb3P09026 Rab7-206ENSMUST00000203674 424 ntTSL 5 BASIC19.74■□□□□ 0.75
Hoxb3P09026 Gm4968-201ENSMUST00000071458 858 ntBASIC19.74■□□□□ 0.75
Hoxb3P09026 Paox-202ENSMUST00000097967 1024 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Hoxb3P09026 Lrrc1-205ENSMUST00000183873 3121 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Hoxb3P09026 Mgll-202ENSMUST00000113581 1308 ntTSL 5 BASIC19.74■□□□□ 0.75
Hoxb3P09026 Gpr160-202ENSMUST00000108258 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Hoxb3P09026 Ntn5-202ENSMUST00000182750 1758 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Hoxb3P09026 0610010K14Rik-207ENSMUST00000108577 659 ntTSL 5 BASIC19.73■□□□□ 0.75
Hoxb3P09026 Gm16764-202ENSMUST00000148931 433 ntTSL 5 BASIC19.73■□□□□ 0.75
Hoxb3P09026 2900042K21Rik-201ENSMUST00000194444 653 ntBASIC19.73■□□□□ 0.75
Hoxb3P09026 Ferd3l-201ENSMUST00000061035 886 ntAPPRIS P1 BASIC19.73■□□□□ 0.75
Hoxb3P09026 Gorasp2-201ENSMUST00000028509 2238 ntAPPRIS P2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Hoxb3P09026 M5C1000I18Rik-202ENSMUST00000186205 1414 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Hoxb3P09026 Spats2-201ENSMUST00000063517 3065 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Hoxb3P09026 Celf6-202ENSMUST00000118164 1583 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Hoxb3P09026 Fip1l1-202ENSMUST00000113534 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Hoxb3P09026 Nrarp-201ENSMUST00000104999 2582 ntAPPRIS P1 BASIC19.73■□□□□ 0.75
Hoxb3P09026 Snap91-203ENSMUST00000074501 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Hoxb3P09026 Parl-201ENSMUST00000048642 1348 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Hoxb3P09026 B3galnt1-201ENSMUST00000061826 2028 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Hoxb3P09026 Rbmxl1-202ENSMUST00000211719 1622 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Hoxb3P09026 Ankrd33b-202ENSMUST00000076942 1641 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Hoxb3P09026 Slc35b3-209ENSMUST00000225432 2216 ntAPPRIS P3 BASIC19.72■□□□□ 0.75
Hoxb3P09026 Gm19531-201ENSMUST00000216737 1377 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Hoxb3P09026 Tekt5-201ENSMUST00000043415 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Hoxb3P09026 Tmem234-201ENSMUST00000102591 1437 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Hoxb3P09026 Gm21362-201ENSMUST00000194272 928 ntBASIC19.72■□□□□ 0.75
Hoxb3P09026 Tspan2-203ENSMUST00000196611 682 ntTSL 5 BASIC19.72■□□□□ 0.75
Hoxb3P09026 A230083G16Rik-201ENSMUST00000069553 991 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Hoxb3P09026 Usf3-201ENSMUST00000088356 757 ntAPPRIS ALT2 TSL 5 BASIC19.72■□□□□ 0.75
Hoxb3P09026 Tmprss5-205ENSMUST00000170246 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Hoxb3P09026 Ccdc9-201ENSMUST00000041010 2379 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
Hoxb3P09026 Rer1-201ENSMUST00000030914 1596 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Hoxb3P09026 B630019K06Rik-201ENSMUST00000064196 2583 ntAPPRIS P1 BASIC19.71■□□□□ 0.75
Hoxb3P09026 Crlf2-203ENSMUST00000200284 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Hoxb3P09026 Gm26796-201ENSMUST00000181092 2276 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Hoxb3P09026 Spint1-201ENSMUST00000028783 2273 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Hoxb3P09026 Ssu72-202ENSMUST00000105595 874 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Hoxb3P09026 Gm20878-202ENSMUST00000108028 339 ntAPPRIS ALT2 TSL 5 BASIC19.71■□□□□ 0.75
Hoxb3P09026 Smad6-203ENSMUST00000179458 273 ntBASIC19.71■□□□□ 0.75
Hoxb3P09026 Krtap5-1-202ENSMUST00000188274 742 ntBASIC19.71■□□□□ 0.75
Hoxb3P09026 4932443I19Rik-204ENSMUST00000214337 1212 ntAPPRIS ALT2 TSL 5 BASIC19.71■□□□□ 0.75
Hoxb3P09026 Tmem53-201ENSMUST00000062824 991 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Hoxb3P09026 Trim3-203ENSMUST00000106791 2466 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Hoxb3P09026 Akt1-201ENSMUST00000001780 2690 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Hoxb3P09026 Puf60-202ENSMUST00000100527 1878 ntAPPRIS P4 TSL 1 (best) BASIC19.71■□□□□ 0.75
Hoxb3P09026 Jag2-201ENSMUST00000075827 5106 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Hoxb3P09026 Inafm2-201ENSMUST00000149978 3053 ntAPPRIS P1 BASIC19.7■□□□□ 0.74
Hoxb3P09026 Phf14-203ENSMUST00000115511 3336 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
Hoxb3P09026 Dnajb11-205ENSMUST00000178320 1628 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
Hoxb3P09026 Mbnl3-203ENSMUST00000114876 2243 ntAPPRIS P2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Hoxb3P09026 Atp23-202ENSMUST00000168520 1043 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Hoxb3P09026 Morf4l1-211ENSMUST00000191189 1223 ntTSL 5 BASIC19.7■□□□□ 0.74
Hoxb3P09026 Snapc3-202ENSMUST00000071544 942 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Hoxb3P09026 Alx3-201ENSMUST00000014747 1874 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Hoxb3P09026 Gpn2-201ENSMUST00000030661 1367 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Hoxb3P09026 Hhex-201ENSMUST00000025944 1802 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Hoxb3P09026 Gm17641-201ENSMUST00000166328 2350 ntBASIC19.69■□□□□ 0.74
Hoxb3P09026 Gm13647-201ENSMUST00000154654 622 ntTSL 5 BASIC19.69■□□□□ 0.74
Hoxb3P09026 Ctf1-204ENSMUST00000206506 784 ntTSL 2 BASIC19.69■□□□□ 0.74
Hoxb3P09026 Erh-205ENSMUST00000218740 981 ntTSL 2 BASIC19.69■□□□□ 0.74
Hoxb3P09026 H2-Ke6-201ENSMUST00000045467 965 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Hoxb3P09026 Sap18b-201ENSMUST00000074053 789 ntAPPRIS P1 BASIC19.69■□□□□ 0.74
Hoxb3P09026 Adrm1-201ENSMUST00000061437 1535 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Hoxb3P09026 Wnt11-205ENSMUST00000167303 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Hoxb3P09026 Espn-210ENSMUST00000105656 1593 ntTSL 5 BASIC19.69■□□□□ 0.74
Hoxb3P09026 Cdc42bpg-201ENSMUST00000025681 5995 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
Hoxb3P09026 Dmtn-209ENSMUST00000228295 2572 ntBASIC19.69■□□□□ 0.74
Hoxb3P09026 Ndrg2-202ENSMUST00000111632 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Hoxb3P09026 Gnb2-201ENSMUST00000031726 1860 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Hoxb3P09026 Stbd1-201ENSMUST00000050952 1985 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Hoxb3P09026 Ankrd9-201ENSMUST00000043459 1706 ntAPPRIS P2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Hoxb3P09026 6330403L08Rik-202ENSMUST00000187923 5522 ntBASIC19.68■□□□□ 0.74
Hoxb3P09026 AC165080.2-201ENSMUST00000217491 1530 ntBASIC19.68■□□□□ 0.74
Hoxb3P09026 Lhpp-202ENSMUST00000106170 999 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Hoxb3P09026 Hsp25-ps1-201ENSMUST00000109187 630 ntBASIC19.68■□□□□ 0.74
Hoxb3P09026 Rab6b-202ENSMUST00000189134 716 ntTSL 3 BASIC19.68■□□□□ 0.74
Hoxb3P09026 Rab34-209ENSMUST00000207728 567 ntTSL 2 BASIC19.68■□□□□ 0.74
Hoxb3P09026 Akip1-201ENSMUST00000033335 1028 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Hoxb3P09026 Sds-201ENSMUST00000066540 1207 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Hoxb3P09026 Wdr33-202ENSMUST00000082319 1152 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Hoxb3P09026 Irak1-202ENSMUST00000068286 2537 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
Hoxb3P09026 4930412F12Rik-201ENSMUST00000211700 1471 ntBASIC19.67■□□□□ 0.74
Retrieved 100 of 76,532 protein–RNA pairs in 39.5 ms