Protein–RNA interactions for Protein: A0A1L1SQF0

Uncharacterized protein (Fragment), mousemouse

Predictions only

Length 893 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
A0A1L1SQF0 Mtfmt-201ENSMUST00000074792 2042 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
A0A1L1SQF0 Cep78-201ENSMUST00000047704 2548 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
A0A1L1SQF0 Slc36a4-202ENSMUST00000115588 1745 ntAPPRIS ALT2 TSL 1 (best) BASIC22.34■■□□□ 1.17
A0A1L1SQF0 Upf1-201ENSMUST00000075666 4618 ntAPPRIS P2 TSL 1 (best) BASIC22.34■■□□□ 1.17
A0A1L1SQF0 Tead1-204ENSMUST00000106638 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC22.34■■□□□ 1.17
A0A1L1SQF0 Hopx-203ENSMUST00000120827 1217 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
A0A1L1SQF0 Hoxc11-201ENSMUST00000001701 2021 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
A0A1L1SQF0 Noa1-201ENSMUST00000047860 2288 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
A0A1L1SQF0 Gnb2-201ENSMUST00000031726 1860 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
A0A1L1SQF0 Tmem263-201ENSMUST00000095383 3616 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
A0A1L1SQF0 Spc24-201ENSMUST00000098942 1366 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
A0A1L1SQF0 Kctd20-204ENSMUST00000122163 2423 ntAPPRIS P1 TSL 5 BASIC22.33■■□□□ 1.17
A0A1L1SQF0 Lrch3-201ENSMUST00000023491 5536 ntAPPRIS P3 TSL 1 (best) BASIC22.33■■□□□ 1.17
A0A1L1SQF0 A930012O16Rik-202ENSMUST00000156418 1541 ntTSL 2 BASIC22.33■■□□□ 1.17
A0A1L1SQF0 Hpse-202ENSMUST00000112908 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC22.33■■□□□ 1.17
A0A1L1SQF0 Tsc22d1-203ENSMUST00000101618 1043 ntTSL 1 (best) BASIC22.33■■□□□ 1.17
A0A1L1SQF0 Cep97-205ENSMUST00000121703 609 ntTSL 1 (best) BASIC22.33■■□□□ 1.17
A0A1L1SQF0 Tmem127-202ENSMUST00000174288 842 ntTSL 2 BASIC22.33■■□□□ 1.17
A0A1L1SQF0 Ppp1r35-201ENSMUST00000031739 956 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
A0A1L1SQF0 Rhov-201ENSMUST00000037360 1703 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
A0A1L1SQF0 Pou2f2-210ENSMUST00000176408 1697 ntTSL 5 BASIC22.33■■□□□ 1.16
A0A1L1SQF0 Cacnb1-202ENSMUST00000092736 1880 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
A0A1L1SQF0 Nova2-202ENSMUST00000220302 8372 ntAPPRIS P1 TSL 5 BASIC22.32■■□□□ 1.16
A0A1L1SQF0 Nova2-201ENSMUST00000032571 8372 ntTSL 5 BASIC22.32■■□□□ 1.16
A0A1L1SQF0 Hmg20b-203ENSMUST00000105324 1540 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
A0A1L1SQF0 Trim3-203ENSMUST00000106791 2466 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
A0A1L1SQF0 Gabra5-201ENSMUST00000068456 2671 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
A0A1L1SQF0 Kirrel3-202ENSMUST00000115148 2851 ntAPPRIS P3 TSL 5 BASIC22.32■■□□□ 1.16
A0A1L1SQF0 Bex4-201ENSMUST00000116527 837 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
A0A1L1SQF0 Hrh3-203ENSMUST00000164442 1242 ntAPPRIS ALT2 TSL 5 BASIC22.32■■□□□ 1.16
A0A1L1SQF0 Tcte2-201ENSMUST00000053376 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC22.32■■□□□ 1.16
A0A1L1SQF0 Fgfrl1-202ENSMUST00000112560 2318 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
A0A1L1SQF0 Stk3-202ENSMUST00000067033 2471 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
A0A1L1SQF0 Acot3-203ENSMUST00000223080 1545 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
A0A1L1SQF0 Ank1-207ENSMUST00000118733 8201 ntAPPRIS ALT2 TSL 1 (best) BASIC22.31■■□□□ 1.16
A0A1L1SQF0 Gyg-201ENSMUST00000118015 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC22.31■■□□□ 1.16
A0A1L1SQF0 Uba2-201ENSMUST00000102746 2579 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
A0A1L1SQF0 Cpsf4-202ENSMUST00000160422 1756 ntAPPRIS ALT1 TSL 5 BASIC22.31■■□□□ 1.16
A0A1L1SQF0 Mast4-205ENSMUST00000166726 5968 ntAPPRIS ALT2 TSL 5 BASIC22.31■■□□□ 1.16
A0A1L1SQF0 Ulk2-201ENSMUST00000004920 5743 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
A0A1L1SQF0 Uckl1os-201ENSMUST00000122831 2018 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
A0A1L1SQF0 Gja3-201ENSMUST00000061614 2766 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
A0A1L1SQF0 Tusc3-203ENSMUST00000209440 1535 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
A0A1L1SQF0 Mfsd6-205ENSMUST00000156876 4932 ntAPPRIS P4 TSL 5 BASIC22.31■■□□□ 1.16
A0A1L1SQF0 Gapvd1-201ENSMUST00000028224 5695 ntAPPRIS P2 TSL 1 (best) BASIC22.3■■□□□ 1.16
A0A1L1SQF0 Fdxacb1-203ENSMUST00000176335 1817 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
A0A1L1SQF0 Adssl1-202ENSMUST00000180015 1819 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
A0A1L1SQF0 Scarb1-201ENSMUST00000086075 2521 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
A0A1L1SQF0 Clasp2-211ENSMUST00000216817 2234 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
A0A1L1SQF0 Exosc4-201ENSMUST00000059045 1796 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
A0A1L1SQF0 Gm26837-201ENSMUST00000180821 2110 ntTSL 5 BASIC22.3■■□□□ 1.16
A0A1L1SQF0 Ddost-201ENSMUST00000030538 2120 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
A0A1L1SQF0 Arfrp1-203ENSMUST00000127988 2447 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
A0A1L1SQF0 Hhipl1-201ENSMUST00000021685 5174 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
A0A1L1SQF0 Krt76-201ENSMUST00000100179 2312 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
A0A1L1SQF0 Gtpbp2-217ENSMUST00000172170 2587 ntTSL 5 BASIC22.29■■□□□ 1.16
A0A1L1SQF0 0610009L18Rik-201ENSMUST00000143813 619 ntTSL 2 BASIC22.29■■□□□ 1.16
A0A1L1SQF0 1700020G03Rik-201ENSMUST00000211264 889 ntBASIC22.29■■□□□ 1.16
A0A1L1SQF0 Cuta-201ENSMUST00000025027 639 ntAPPRIS P3 TSL 1 (best) BASIC22.29■■□□□ 1.16
A0A1L1SQF0 Vstm2b-201ENSMUST00000044705 2627 ntAPPRIS P1 TSL 5 BASIC22.29■■□□□ 1.16
A0A1L1SQF0 Taf4b-201ENSMUST00000169862 5149 ntAPPRIS P1 TSL 5 BASIC22.29■■□□□ 1.16
A0A1L1SQF0 Man2c1os-201ENSMUST00000125333 1910 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
A0A1L1SQF0 Rps6ka2-201ENSMUST00000024575 5404 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
A0A1L1SQF0 Pomgnt1-203ENSMUST00000106498 2719 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
A0A1L1SQF0 Slc25a3-203ENSMUST00000164505 1483 ntAPPRIS P2 TSL 5 BASIC22.28■■□□□ 1.16
A0A1L1SQF0 Pthlh-201ENSMUST00000052296 1603 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
A0A1L1SQF0 Gm9780-202ENSMUST00000184915 1394 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
A0A1L1SQF0 Ankrd11-207ENSMUST00000212937 943 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
A0A1L1SQF0 Wnt10b-203ENSMUST00000226610 2217 ntAPPRIS P1 BASIC22.28■■□□□ 1.16
A0A1L1SQF0 Wnt10b-201ENSMUST00000023732 2226 ntAPPRIS P1 TSL 5 BASIC22.28■■□□□ 1.16
A0A1L1SQF0 Stau2-201ENSMUST00000027052 2763 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
A0A1L1SQF0 Espn-207ENSMUST00000105653 1411 ntTSL 5 BASIC22.28■■□□□ 1.16
A0A1L1SQF0 Art1-201ENSMUST00000033300 1425 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
A0A1L1SQF0 Dalrd3-201ENSMUST00000019183 1746 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
A0A1L1SQF0 Tril-201ENSMUST00000127748 5363 ntAPPRIS P1 BASIC22.28■■□□□ 1.16
A0A1L1SQF0 Sirt1-201ENSMUST00000020257 3905 ntAPPRIS P3 TSL 1 (best) BASIC22.27■■□□□ 1.16
A0A1L1SQF0 Mafg-201ENSMUST00000058162 4923 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
A0A1L1SQF0 Ier3ip1-201ENSMUST00000026487 1395 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
A0A1L1SQF0 Trmt61a-202ENSMUST00000168338 2131 ntAPPRIS P1 TSL 5 BASIC22.27■■□□□ 1.16
A0A1L1SQF0 Efr3a-203ENSMUST00000172756 1411 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
A0A1L1SQF0 Slc35b2-201ENSMUST00000041353 2326 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
A0A1L1SQF0 Pgam5-201ENSMUST00000059229 2044 ntAPPRIS P3 TSL 1 (best) BASIC22.27■■□□□ 1.16
A0A1L1SQF0 Eif2b4-202ENSMUST00000114603 1966 ntTSL 1 (best) BASIC22.27■■□□□ 1.15
A0A1L1SQF0 Arhgap23-203ENSMUST00000121799 5816 ntAPPRIS P1 TSL 5 BASIC22.26■■□□□ 1.15
A0A1L1SQF0 Cbfb-204ENSMUST00000109395 2709 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
A0A1L1SQF0 Hoxa9-202ENSMUST00000114425 851 ntTSL 2 BASIC22.26■■□□□ 1.15
A0A1L1SQF0 Gm43530-201ENSMUST00000195920 274 ntBASIC22.26■■□□□ 1.15
A0A1L1SQF0 Plekhj1-201ENSMUST00000036805 1260 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
A0A1L1SQF0 Gm9870-201ENSMUST00000063874 645 ntBASIC22.26■■□□□ 1.15
A0A1L1SQF0 Ythdf1-201ENSMUST00000037299 3184 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
A0A1L1SQF0 Siah2-201ENSMUST00000070368 2511 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
A0A1L1SQF0 Ccne1-201ENSMUST00000108023 2000 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
A0A1L1SQF0 Gsx2-201ENSMUST00000040477 1665 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
A0A1L1SQF0 Qtrt1-201ENSMUST00000002902 1316 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
A0A1L1SQF0 Gpr137-204ENSMUST00000099782 1742 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
A0A1L1SQF0 Map2k2-202ENSMUST00000105331 1556 ntAPPRIS ALT1 TSL 1 (best) BASIC22.25■■□□□ 1.15
A0A1L1SQF0 Gm7102-201ENSMUST00000180168 1624 ntAPPRIS P1 BASIC22.25■■□□□ 1.15
A0A1L1SQF0 Ttc9-202ENSMUST00000218362 4754 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
A0A1L1SQF0 Rap1a-202ENSMUST00000197094 782 ntTSL 3 BASIC22.25■■□□□ 1.15
A0A1L1SQF0 Bex1-201ENSMUST00000058125 866 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
Retrieved 100 of 76,532 protein–RNA pairs in 25.1 ms