Protein–RNA interactions for Protein: S4R1E0

H2afb1, Histone H2A, mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afb1S4R1E0 Rell2-202ENSMUST00000091932 1995 ntTSL 2 BASIC17.98■□□□□ 0.47
H2afb1S4R1E0 Crocc-202ENSMUST00000097816 6273 ntTSL 5 BASIC17.98■□□□□ 0.47
H2afb1S4R1E0 Tmem86a-201ENSMUST00000010451 1831 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
H2afb1S4R1E0 Adcy3-202ENSMUST00000124505 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC17.97■□□□□ 0.47
H2afb1S4R1E0 Zbtb7a-202ENSMUST00000117956 1863 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
H2afb1S4R1E0 Prkar2b-201ENSMUST00000003079 1657 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
H2afb1S4R1E0 Six3os1-206ENSMUST00000175921 2737 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
H2afb1S4R1E0 Tlx2-201ENSMUST00000089641 1236 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
H2afb1S4R1E0 Srcap-202ENSMUST00000098025 1257 ntTSL 5 BASIC17.97■□□□□ 0.47
H2afb1S4R1E0 Ksr1-202ENSMUST00000108264 2748 ntTSL 5 BASIC17.97■□□□□ 0.47
H2afb1S4R1E0 Snx5-202ENSMUST00000110030 2512 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
H2afb1S4R1E0 Gdf11-201ENSMUST00000026408 4062 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
H2afb1S4R1E0 Zbed3-201ENSMUST00000045909 1894 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
H2afb1S4R1E0 Ubr5-201ENSMUST00000110336 9242 ntTSL 5 BASIC17.96■□□□□ 0.47
H2afb1S4R1E0 Sp5-201ENSMUST00000100043 2100 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
H2afb1S4R1E0 Letm2-201ENSMUST00000079160 2126 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
H2afb1S4R1E0 Phf14-202ENSMUST00000115510 3353 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
H2afb1S4R1E0 Setd4-202ENSMUST00000113951 1826 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
H2afb1S4R1E0 Tmem238-201ENSMUST00000168578 1375 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
H2afb1S4R1E0 Gse1-202ENSMUST00000118136 4492 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
H2afb1S4R1E0 Cd37-204ENSMUST00000209779 2541 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
H2afb1S4R1E0 Gm43545-201ENSMUST00000196765 2779 ntBASIC17.96■□□□□ 0.47
H2afb1S4R1E0 Fam98c-209ENSMUST00000164589 1293 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
H2afb1S4R1E0 Tsen54-201ENSMUST00000021134 1979 ntAPPRIS P2 TSL 1 (best) BASIC17.96■□□□□ 0.47
H2afb1S4R1E0 Rasgrp2-206ENSMUST00000113472 2124 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
H2afb1S4R1E0 Ntn5-202ENSMUST00000182750 1758 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
H2afb1S4R1E0 Chpt1-203ENSMUST00000117440 4863 ntAPPRIS ALT2 TSL 5 BASIC17.96■□□□□ 0.47
H2afb1S4R1E0 Ankrd40-203ENSMUST00000107818 3487 ntAPPRIS P3 TSL 5 BASIC17.96■□□□□ 0.47
H2afb1S4R1E0 Sh3bp1-204ENSMUST00000109698 1923 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
H2afb1S4R1E0 Chml-203ENSMUST00000210367 1324 ntTSL 5 BASIC17.96■□□□□ 0.46
H2afb1S4R1E0 Gm572-201ENSMUST00000105698 1385 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
H2afb1S4R1E0 Pelo-201ENSMUST00000109226 1600 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
H2afb1S4R1E0 Aplf-201ENSMUST00000032130 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
H2afb1S4R1E0 Fam207a-201ENSMUST00000045454 2394 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
H2afb1S4R1E0 Celf6-201ENSMUST00000034840 2765 ntAPPRIS P2 TSL 1 (best) BASIC17.95■□□□□ 0.46
H2afb1S4R1E0 Foxj3-206ENSMUST00000138845 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
H2afb1S4R1E0 Alkbh5-201ENSMUST00000044250 5730 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
H2afb1S4R1E0 Trir-201ENSMUST00000047281 902 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
H2afb1S4R1E0 Dgcr6-209ENSMUST00000155387 1415 ntTSL 3 BASIC17.95■□□□□ 0.46
H2afb1S4R1E0 Tal1-204ENSMUST00000162489 2894 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
H2afb1S4R1E0 Jkamp-202ENSMUST00000117449 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
H2afb1S4R1E0 Hrh3-201ENSMUST00000056480 2706 ntAPPRIS P2 TSL 1 (best) BASIC17.94■□□□□ 0.46
H2afb1S4R1E0 Mex3d-201ENSMUST00000105350 3266 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
H2afb1S4R1E0 Upf1-201ENSMUST00000075666 4618 ntAPPRIS P2 TSL 1 (best) BASIC17.94■□□□□ 0.46
H2afb1S4R1E0 Eif2ak4-207ENSMUST00000110877 2134 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
H2afb1S4R1E0 Gm37035-201ENSMUST00000194809 2148 ntBASIC17.94■□□□□ 0.46
H2afb1S4R1E0 Gm35161-201ENSMUST00000221765 941 ntTSL 5 BASIC17.94■□□□□ 0.46
H2afb1S4R1E0 Ppp1r35-201ENSMUST00000031739 956 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
H2afb1S4R1E0 Ttc36-201ENSMUST00000044694 888 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
H2afb1S4R1E0 A630072M18Rik-201ENSMUST00000190567 5410 ntBASIC17.94■□□□□ 0.46
H2afb1S4R1E0 Zfp653-202ENSMUST00000179605 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
H2afb1S4R1E0 Vav2-201ENSMUST00000056176 5221 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
H2afb1S4R1E0 Becn1-217ENSMUST00000172233 1493 ntTSL 5 BASIC17.94■□□□□ 0.46
H2afb1S4R1E0 Cpne2-202ENSMUST00000109537 2121 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
H2afb1S4R1E0 Barx1-201ENSMUST00000021813 1399 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
H2afb1S4R1E0 Prkar1b-201ENSMUST00000026973 2637 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
H2afb1S4R1E0 Gm2464-202ENSMUST00000194841 877 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
H2afb1S4R1E0 Gm40881-201ENSMUST00000223397 166 ntBASIC17.93■□□□□ 0.46
H2afb1S4R1E0 Pbx1-201ENSMUST00000064438 1020 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
H2afb1S4R1E0 Pard3-219ENSMUST00000162309 5659 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
H2afb1S4R1E0 Lrfn4-202ENSMUST00000113822 2918 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
H2afb1S4R1E0 Tmprss5-205ENSMUST00000170246 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
H2afb1S4R1E0 4930507D05Rik-201ENSMUST00000181110 1834 ntAPPRIS P1 BASIC17.93■□□□□ 0.46
H2afb1S4R1E0 Zmiz2-201ENSMUST00000012612 4199 ntAPPRIS P2 TSL 5 BASIC17.93■□□□□ 0.46
H2afb1S4R1E0 Zfp668-202ENSMUST00000106261 2410 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
H2afb1S4R1E0 Sptbn4-201ENSMUST00000011895 8747 ntAPPRIS P2 TSL 1 (best) BASIC17.92■□□□□ 0.46
H2afb1S4R1E0 Sort1-203ENSMUST00000135636 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
H2afb1S4R1E0 Rfk-201ENSMUST00000025617 2482 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
H2afb1S4R1E0 Krt76-201ENSMUST00000100179 2312 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
H2afb1S4R1E0 Txnrd2-201ENSMUST00000115604 1235 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
H2afb1S4R1E0 Ube2e3-202ENSMUST00000121433 1235 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
H2afb1S4R1E0 Zfp629-208ENSMUST00000151107 583 ntTSL 3 BASIC17.92■□□□□ 0.46
H2afb1S4R1E0 Zfp346-202ENSMUST00000159147 1146 ntTSL 5 BASIC17.92■□□□□ 0.46
H2afb1S4R1E0 Gm18755-201ENSMUST00000218030 1099 ntBASIC17.92■□□□□ 0.46
H2afb1S4R1E0 A930002H24Rik-201ENSMUST00000050753 492 ntAPPRIS P1 BASIC17.92■□□□□ 0.46
H2afb1S4R1E0 Exoc3l2-201ENSMUST00000011407 2200 ntTSL 5 BASIC17.92■□□□□ 0.46
H2afb1S4R1E0 Wnk2-210ENSMUST00000162403 6147 ntAPPRIS ALT2 TSL 5 BASIC17.92■□□□□ 0.46
H2afb1S4R1E0 Letm2-209ENSMUST00000210810 1538 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
H2afb1S4R1E0 Clint1-201ENSMUST00000109260 3311 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
H2afb1S4R1E0 Soga1-201ENSMUST00000069098 7864 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
H2afb1S4R1E0 Tedc1-201ENSMUST00000049271 2441 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
H2afb1S4R1E0 Akt1s1-204ENSMUST00000107885 1812 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
H2afb1S4R1E0 Ltbp4-205ENSMUST00000121175 5118 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
H2afb1S4R1E0 Kl-201ENSMUST00000078856 5118 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
H2afb1S4R1E0 Hoxd3-201ENSMUST00000047830 2292 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
H2afb1S4R1E0 Ptger3-202ENSMUST00000173533 2097 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
H2afb1S4R1E0 Pdgfa-204ENSMUST00000110897 1287 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
H2afb1S4R1E0 Gpx7-202ENSMUST00000184609 331 ntTSL 3 BASIC17.91■□□□□ 0.46
H2afb1S4R1E0 Gadd45a-207ENSMUST00000204369 716 ntTSL 5 BASIC17.91■□□□□ 0.46
H2afb1S4R1E0 Rabac1-201ENSMUST00000076961 899 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
H2afb1S4R1E0 Ankrd17-214ENSMUST00000218526 4938 ntTSL 5 BASIC17.91■□□□□ 0.46
H2afb1S4R1E0 1700030C10Rik-203ENSMUST00000189625 1735 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
H2afb1S4R1E0 Mmp15-201ENSMUST00000034243 5135 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
H2afb1S4R1E0 Kcnt1-203ENSMUST00000114172 5219 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
H2afb1S4R1E0 Htr6-201ENSMUST00000068036 1362 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
H2afb1S4R1E0 Ankrd33b-202ENSMUST00000076942 1641 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
H2afb1S4R1E0 Pus1-203ENSMUST00000086643 1868 ntAPPRIS P4 TSL 1 (best) BASIC17.9■□□□□ 0.46
H2afb1S4R1E0 Dap3-201ENSMUST00000090938 4760 ntAPPRIS P2 TSL 1 (best) BASIC17.9■□□□□ 0.46
H2afb1S4R1E0 Stn1-201ENSMUST00000049369 1992 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
H2afb1S4R1E0 Fmnl2-201ENSMUST00000049483 5461 ntTSL 5 BASIC17.9■□□□□ 0.46
Retrieved 100 of 76,532 protein–RNA pairs in 21.7 ms