Protein–RNA interactions for Protein: Q99PP7

Trim33, E3 ubiquitin-protein ligase TRIM33, mousemouse

Predictions only

Length 1,142 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim33Q99PP7 Pth2-202ENSMUST00000210086 481 ntTSL 2 BASIC19.64■□□□□ 0.73
Trim33Q99PP7 Syt7-203ENSMUST00000169121 6834 ntTSL 5 BASIC19.64■□□□□ 0.73
Trim33Q99PP7 AC166356.1-201ENSMUST00000228236 1426 ntBASIC19.64■□□□□ 0.73
Trim33Q99PP7 Foxj2-201ENSMUST00000003238 5283 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Trim33Q99PP7 Dedd2-201ENSMUST00000058702 1828 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Trim33Q99PP7 Best2-201ENSMUST00000059072 1971 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Trim33Q99PP7 Gpatch3-201ENSMUST00000030662 2004 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Trim33Q99PP7 Amdhd1-201ENSMUST00000016034 2421 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Trim33Q99PP7 Mylip-201ENSMUST00000038275 3065 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Trim33Q99PP7 Smc6-201ENSMUST00000020931 5603 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Trim33Q99PP7 Prkar1b-201ENSMUST00000026973 2637 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Trim33Q99PP7 Spry1-201ENSMUST00000038569 2481 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Trim33Q99PP7 Spsb3-204ENSMUST00000119829 1955 ntAPPRIS ALT2 TSL 2 BASIC19.63■□□□□ 0.73
Trim33Q99PP7 Gpr62-201ENSMUST00000164834 1977 ntAPPRIS P1 BASIC19.63■□□□□ 0.73
Trim33Q99PP7 Trp53rka-201ENSMUST00000039007 1880 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Trim33Q99PP7 Rspo1-201ENSMUST00000030687 1834 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Trim33Q99PP7 Exosc4-201ENSMUST00000059045 1796 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Trim33Q99PP7 Pias2-202ENSMUST00000114777 4968 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Trim33Q99PP7 Gm21956-201ENSMUST00000179946 522 ntBASIC19.63■□□□□ 0.73
Trim33Q99PP7 3110082J24Rik-202ENSMUST00000199573 767 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Trim33Q99PP7 Gltpd2-201ENSMUST00000057685 1216 ntAPPRIS P2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Trim33Q99PP7 Map4k3-201ENSMUST00000025089 4225 ntAPPRIS P2 TSL 5 BASIC19.63■□□□□ 0.73
Trim33Q99PP7 Rora-202ENSMUST00000113624 2591 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Trim33Q99PP7 Snrpb-201ENSMUST00000103199 1161 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Trim33Q99PP7 Siglec15-201ENSMUST00000170760 1156 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Trim33Q99PP7 D630002J18Rik-201ENSMUST00000181854 1115 ntBASIC19.62■□□□□ 0.73
Trim33Q99PP7 Fuz-214ENSMUST00000209132 853 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Trim33Q99PP7 6330562C20Rik-201ENSMUST00000098867 784 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Trim33Q99PP7 Pick1-204ENSMUST00000163571 2054 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
Trim33Q99PP7 Aktip-202ENSMUST00000120213 2200 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Trim33Q99PP7 Sirt1-207ENSMUST00000177694 3353 ntTSL 5 BASIC19.61■□□□□ 0.73
Trim33Q99PP7 Krt79-201ENSMUST00000023799 2097 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Trim33Q99PP7 Meg3-207ENSMUST00000143836 1896 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Trim33Q99PP7 Htra2-202ENSMUST00000113962 1305 ntTSL 5 BASIC19.61■□□□□ 0.73
Trim33Q99PP7 Zbtb7a-203ENSMUST00000119606 1841 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Trim33Q99PP7 Kcng2-201ENSMUST00000077962 2813 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
Trim33Q99PP7 AC122379.1-201ENSMUST00000220658 355 ntTSL 3 BASIC19.61■□□□□ 0.73
Trim33Q99PP7 Gm10125-201ENSMUST00000074702 2286 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Trim33Q99PP7 Celf6-203ENSMUST00000118549 2973 ntAPPRIS ALT2 TSL 5 BASIC19.61■□□□□ 0.73
Trim33Q99PP7 Tinagl1-202ENSMUST00000105998 1976 ntAPPRIS P2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Trim33Q99PP7 Zfp69-201ENSMUST00000106280 2362 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
Trim33Q99PP7 Dleu2-203ENSMUST00000182259 1437 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Trim33Q99PP7 Setd4-202ENSMUST00000113951 1826 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
Trim33Q99PP7 Rhoq-201ENSMUST00000024956 4151 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Trim33Q99PP7 Gm43034-201ENSMUST00000198678 1364 ntBASIC19.6■□□□□ 0.73
Trim33Q99PP7 Scarb1-201ENSMUST00000086075 2521 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Trim33Q99PP7 Rbm15b-201ENSMUST00000055843 6511 ntAPPRIS P1 BASIC19.6■□□□□ 0.73
Trim33Q99PP7 Gm20548-204ENSMUST00000174528 791 ntTSL 3 BASIC19.6■□□□□ 0.73
Trim33Q99PP7 Gm9207-201ENSMUST00000198773 1115 ntBASIC19.6■□□□□ 0.73
Trim33Q99PP7 Gm4553-202ENSMUST00000210925 1044 ntAPPRIS P5 BASIC19.6■□□□□ 0.73
Trim33Q99PP7 AC140930.3-201ENSMUST00000222935 274 ntBASIC19.6■□□□□ 0.73
Trim33Q99PP7 Dscam-201ENSMUST00000056102 7498 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Trim33Q99PP7 Aplf-201ENSMUST00000032130 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Trim33Q99PP7 Lmo2-208ENSMUST00000170926 1529 ntAPPRIS P1 TSL 2 BASIC19.6■□□□□ 0.73
Trim33Q99PP7 Smad2-205ENSMUST00000168423 2857 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
Trim33Q99PP7 Inpp5a-203ENSMUST00000106098 2826 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Trim33Q99PP7 Spry1-203ENSMUST00000108109 2451 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Trim33Q99PP7 Pcgf6-201ENSMUST00000026032 2098 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Trim33Q99PP7 B430319F04Rik-201ENSMUST00000209731 2669 ntBASIC19.59■□□□□ 0.73
Trim33Q99PP7 3110053B16Rik-202ENSMUST00000140360 2004 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Trim33Q99PP7 Gm5475-201ENSMUST00000132119 2608 ntAPPRIS P5 TSL 1 (best) BASIC19.59■□□□□ 0.73
Trim33Q99PP7 Slc35a2-209ENSMUST00000208397 1374 ntAPPRIS ALT2 TSL 5 BASIC19.59■□□□□ 0.73
Trim33Q99PP7 Cdc20-201ENSMUST00000006565 1793 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Trim33Q99PP7 Ets1-202ENSMUST00000050797 1976 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Trim33Q99PP7 Rcan3-201ENSMUST00000030606 5111 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Trim33Q99PP7 Tead2-201ENSMUST00000033060 2140 ntAPPRIS P3 TSL 1 (best) BASIC19.58■□□□□ 0.73
Trim33Q99PP7 Gja3-201ENSMUST00000061614 2766 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Trim33Q99PP7 Ubl3-202ENSMUST00000164904 2001 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Trim33Q99PP7 Prmt8-201ENSMUST00000032500 2724 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Trim33Q99PP7 Acsl3-203ENSMUST00000134566 2492 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
Trim33Q99PP7 Gm20522-201ENSMUST00000173576 784 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
Trim33Q99PP7 Tusc2-203ENSMUST00000193418 410 ntTSL 3 BASIC19.58■□□□□ 0.72
Trim33Q99PP7 Gm43759-201ENSMUST00000196925 1261 ntBASIC19.58■□□□□ 0.72
Trim33Q99PP7 Snhg20-203ENSMUST00000182811 2153 ntBASIC19.58■□□□□ 0.72
Trim33Q99PP7 Hck-202ENSMUST00000109799 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.72
Trim33Q99PP7 Hck-203ENSMUST00000189688 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.72
Trim33Q99PP7 Hck-201ENSMUST00000003370 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.72
Trim33Q99PP7 Vav3-201ENSMUST00000046864 5019 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Trim33Q99PP7 Foxo3-202ENSMUST00000105501 1316 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Trim33Q99PP7 Cotl1-202ENSMUST00000168698 1520 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Trim33Q99PP7 Xylt1-201ENSMUST00000032892 9020 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Trim33Q99PP7 Nkain1-201ENSMUST00000105993 1202 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Trim33Q99PP7 Serbp1-212ENSMUST00000204294 717 ntTSL 5 BASIC19.57■□□□□ 0.72
Trim33Q99PP7 L3mbtl4-201ENSMUST00000093007 2445 ntAPPRIS P1 TSL 5 BASIC19.57■□□□□ 0.72
Trim33Q99PP7 Fmnl2-204ENSMUST00000127122 5508 ntTSL 5 BASIC19.57■□□□□ 0.72
Trim33Q99PP7 Homer1-206ENSMUST00000109493 2580 ntTSL 5 BASIC19.57■□□□□ 0.72
Trim33Q99PP7 Dda1-202ENSMUST00000124745 1933 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Trim33Q99PP7 Pafah1b1-201ENSMUST00000021091 5803 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Trim33Q99PP7 AA543186-201ENSMUST00000180841 1696 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Trim33Q99PP7 Kiss1-205ENSMUST00000195286 656 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Trim33Q99PP7 N4bp2os-203ENSMUST00000202673 699 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Trim33Q99PP7 2810025M15Rik-201ENSMUST00000061537 1194 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Trim33Q99PP7 Pdcd7-201ENSMUST00000048184 2419 ntAPPRIS P2 TSL 1 (best) BASIC19.56■□□□□ 0.72
Trim33Q99PP7 Lsm14a-201ENSMUST00000085585 2944 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Trim33Q99PP7 Acot3-203ENSMUST00000223080 1545 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Trim33Q99PP7 Zfp523-201ENSMUST00000002318 2710 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Trim33Q99PP7 Pold2-201ENSMUST00000102922 1646 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Trim33Q99PP7 Wnt11-205ENSMUST00000167303 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Trim33Q99PP7 Bcl10-201ENSMUST00000029842 1949 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Trim33Q99PP7 Ssbp1-203ENSMUST00000117411 933 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Retrieved 100 of 76,532 protein–RNA pairs in 33.5 ms