Protein–RNA interactions for Protein: Q91VA1

Slc44a4, Choline transporter-like protein 4, mousemouse

Predictions only

Length 707 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc44a4Q91VA1 Cox7c-202ENSMUST00000078764 433 ntTSL 2 BASIC23.72■■□□□ 1.39
Slc44a4Q91VA1 Gm26995-201ENSMUST00000182216 1306 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
Slc44a4Q91VA1 Shisa5-202ENSMUST00000112059 1910 ntAPPRIS ALT2 TSL 1 (best) BASIC23.72■■□□□ 1.39
Slc44a4Q91VA1 Slc35b3-209ENSMUST00000225432 2216 ntAPPRIS P3 BASIC23.72■■□□□ 1.39
Slc44a4Q91VA1 Rfx5-205ENSMUST00000107260 2355 ntAPPRIS P1 TSL 5 BASIC23.72■■□□□ 1.39
Slc44a4Q91VA1 Impdh1-201ENSMUST00000078155 2437 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
Slc44a4Q91VA1 Dalrd3-201ENSMUST00000019183 1746 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
Slc44a4Q91VA1 Gm26507-201ENSMUST00000181838 1410 ntTSL 1 (best) BASIC23.71■■□□□ 1.39
Slc44a4Q91VA1 Moap1-201ENSMUST00000173760 1312 ntAPPRIS P1 TSL 2 BASIC23.71■■□□□ 1.39
Slc44a4Q91VA1 Gm14281-201ENSMUST00000121700 1294 ntBASIC23.71■■□□□ 1.39
Slc44a4Q91VA1 Foxc1-201ENSMUST00000062292 5844 ntAPPRIS P1 BASIC23.7■■□□□ 1.39
Slc44a4Q91VA1 0610038B21Rik-202ENSMUST00000184762 1524 ntBASIC23.7■■□□□ 1.38
Slc44a4Q91VA1 Whrn-204ENSMUST00000095037 2419 ntTSL 1 (best) BASIC23.7■■□□□ 1.38
Slc44a4Q91VA1 Reep4-203ENSMUST00000226563 1444 ntBASIC23.7■■□□□ 1.38
Slc44a4Q91VA1 Gm27011-201ENSMUST00000182352 972 ntBASIC23.7■■□□□ 1.38
Slc44a4Q91VA1 Gm30085-201ENSMUST00000209694 594 ntTSL 3 BASIC23.7■■□□□ 1.38
Slc44a4Q91VA1 0610010K14Rik-202ENSMUST00000021181 779 ntTSL 1 (best) BASIC23.7■■□□□ 1.38
Slc44a4Q91VA1 Fam60a-202ENSMUST00000081956 2737 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
Slc44a4Q91VA1 Bspry-201ENSMUST00000030088 1757 ntAPPRIS P2 TSL 1 (best) BASIC23.7■■□□□ 1.38
Slc44a4Q91VA1 D030056L22Rik-201ENSMUST00000055792 1631 ntAPPRIS P2 TSL 1 (best) BASIC23.7■■□□□ 1.38
Slc44a4Q91VA1 Mbnl3-203ENSMUST00000114876 2243 ntAPPRIS P2 TSL 1 (best) BASIC23.69■■□□□ 1.38
Slc44a4Q91VA1 Nab1-201ENSMUST00000069792 3874 ntAPPRIS P2 TSL 1 (best) BASIC23.69■■□□□ 1.38
Slc44a4Q91VA1 Nfkbid-203ENSMUST00000108176 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC23.69■■□□□ 1.38
Slc44a4Q91VA1 Gm29394-202ENSMUST00000176935 1326 ntAPPRIS P5 TSL 2 BASIC23.69■■□□□ 1.38
Slc44a4Q91VA1 Fbxw2-202ENSMUST00000091020 1838 ntTSL 1 (best) BASIC23.69■■□□□ 1.38
Slc44a4Q91VA1 5033430I15Rik-201ENSMUST00000038032 729 ntTSL 1 (best) BASIC23.69■■□□□ 1.38
Slc44a4Q91VA1 Mfap4-201ENSMUST00000040522 939 ntAPPRIS ALT2 TSL 2 BASIC23.69■■□□□ 1.38
Slc44a4Q91VA1 Ankrd37-201ENSMUST00000053558 927 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
Slc44a4Q91VA1 Gyg-201ENSMUST00000118015 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC23.69■■□□□ 1.38
Slc44a4Q91VA1 Trim47-201ENSMUST00000021120 2204 ntAPPRIS P4 TSL 1 (best) BASIC23.68■■□□□ 1.38
Slc44a4Q91VA1 Klhl22-201ENSMUST00000117192 2754 ntTSL 5 BASIC23.68■■□□□ 1.38
Slc44a4Q91VA1 Kctd17-206ENSMUST00000162517 901 ntAPPRIS P4 TSL 1 (best) BASIC23.68■■□□□ 1.38
Slc44a4Q91VA1 Kctd17-209ENSMUST00000166142 826 ntAPPRIS ALT2 TSL 1 (best) BASIC23.68■■□□□ 1.38
Slc44a4Q91VA1 Stx6-209ENSMUST00000195302 955 ntTSL 1 (best) BASIC23.68■■□□□ 1.38
Slc44a4Q91VA1 Igfbp6-201ENSMUST00000023807 1112 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
Slc44a4Q91VA1 Lmo1-201ENSMUST00000036992 1282 ntAPPRIS P3 TSL 1 (best) BASIC23.68■■□□□ 1.38
Slc44a4Q91VA1 Cystm1-201ENSMUST00000050584 831 ntAPPRIS ALT2 TSL 1 (best) BASIC23.68■■□□□ 1.38
Slc44a4Q91VA1 Hif1a-203ENSMUST00000110464 1759 ntTSL 1 (best) BASIC23.68■■□□□ 1.38
Slc44a4Q91VA1 Tsc22d1-204ENSMUST00000110888 4999 ntTSL 1 (best) BASIC23.68■■□□□ 1.38
Slc44a4Q91VA1 Atg3-201ENSMUST00000023343 2057 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
Slc44a4Q91VA1 Aktip-202ENSMUST00000120213 2200 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
Slc44a4Q91VA1 Ltk-206ENSMUST00000182203 2232 ntAPPRIS ALT2 TSL 1 (best) BASIC23.67■■□□□ 1.38
Slc44a4Q91VA1 Romo1-202ENSMUST00000109597 550 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
Slc44a4Q91VA1 Dlx6-203ENSMUST00000171311 1071 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
Slc44a4Q91VA1 Mpzl1-210ENSMUST00000194437 643 ntTSL 3 BASIC23.67■■□□□ 1.38
Slc44a4Q91VA1 Tmem42-202ENSMUST00000213514 631 ntTSL 3 BASIC23.67■■□□□ 1.38
Slc44a4Q91VA1 Erh-205ENSMUST00000218740 981 ntTSL 2 BASIC23.67■■□□□ 1.38
Slc44a4Q91VA1 H2-Ab1-201ENSMUST00000040828 1211 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
Slc44a4Q91VA1 Vkorc1l1-202ENSMUST00000073945 650 ntTSL 2 BASIC23.67■■□□□ 1.38
Slc44a4Q91VA1 Rhov-201ENSMUST00000037360 1703 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
Slc44a4Q91VA1 Sdhaf1-201ENSMUST00000098586 2490 ntAPPRIS P1 BASIC23.67■■□□□ 1.38
Slc44a4Q91VA1 Rab28-203ENSMUST00000201422 1697 ntTSL 5 BASIC23.67■■□□□ 1.38
Slc44a4Q91VA1 Hoxa11os-201ENSMUST00000134512 1839 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
Slc44a4Q91VA1 Rnf19b-206ENSMUST00000168461 2532 ntAPPRIS P2 TSL 5 BASIC23.66■■□□□ 1.38
Slc44a4Q91VA1 Mfsd4b2-201ENSMUST00000045526 2285 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
Slc44a4Q91VA1 Speg-206ENSMUST00000122266 917 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
Slc44a4Q91VA1 Specc1-215ENSMUST00000202744 674 ntTSL 3 BASIC23.66■■□□□ 1.38
Slc44a4Q91VA1 Cox4i1-201ENSMUST00000034276 745 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
Slc44a4Q91VA1 Lsm2-201ENSMUST00000007266 873 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
Slc44a4Q91VA1 Krtap5-3-202ENSMUST00000187512 1652 ntAPPRIS P2 BASIC23.66■■□□□ 1.38
Slc44a4Q91VA1 Fgfrl1-202ENSMUST00000112560 2318 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
Slc44a4Q91VA1 Setd4-202ENSMUST00000113951 1826 ntAPPRIS P1 TSL 5 BASIC23.66■■□□□ 1.38
Slc44a4Q91VA1 Ypel1-201ENSMUST00000035682 3322 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
Slc44a4Q91VA1 Baiap2-201ENSMUST00000026436 2394 ntAPPRIS P4 TSL 1 (best) BASIC23.65■■□□□ 1.38
Slc44a4Q91VA1 Arglu1-201ENSMUST00000048545 3197 ntAPPRIS P1 TSL 2 BASIC23.65■■□□□ 1.38
Slc44a4Q91VA1 Mrpl52-201ENSMUST00000010550 418 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
Slc44a4Q91VA1 Snhg20-202ENSMUST00000149822 593 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
Slc44a4Q91VA1 4930413G21Rik-201ENSMUST00000205998 993 ntBASIC23.65■■□□□ 1.38
Slc44a4Q91VA1 Wasl-202ENSMUST00000041737 1298 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
Slc44a4Q91VA1 Slc9a7-201ENSMUST00000072451 2512 ntAPPRIS P2 TSL 1 (best) BASIC23.65■■□□□ 1.38
Slc44a4Q91VA1 Rhbdd3-201ENSMUST00000036320 1790 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
Slc44a4Q91VA1 Rnf32-204ENSMUST00000160246 1565 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
Slc44a4Q91VA1 Dennd5a-201ENSMUST00000080437 5004 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
Slc44a4Q91VA1 Memo1-201ENSMUST00000078459 1513 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.38
Slc44a4Q91VA1 Maf1-205ENSMUST00000160853 1651 ntAPPRIS P2 TSL 1 (best) BASIC23.64■■□□□ 1.38
Slc44a4Q91VA1 Gm13234-201ENSMUST00000120010 747 ntBASIC23.64■■□□□ 1.37
Slc44a4Q91VA1 Mettl26-205ENSMUST00000169308 1026 ntTSL 2 BASIC23.64■■□□□ 1.37
Slc44a4Q91VA1 AC112142.1-201ENSMUST00000228796 918 ntBASIC23.64■■□□□ 1.37
Slc44a4Q91VA1 Rras-201ENSMUST00000044111 995 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
Slc44a4Q91VA1 Sds-201ENSMUST00000066540 1207 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
Slc44a4Q91VA1 Pitx2-202ENSMUST00000042587 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC23.64■■□□□ 1.37
Slc44a4Q91VA1 Zdhhc4-201ENSMUST00000001900 1364 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
Slc44a4Q91VA1 Slc35b2-201ENSMUST00000041353 2326 ntTSL 1 (best) BASIC23.64■■□□□ 1.37
Slc44a4Q91VA1 Rhob-201ENSMUST00000067384 2349 ntAPPRIS P1 BASIC23.64■■□□□ 1.37
Slc44a4Q91VA1 Sebox-202ENSMUST00000125670 1300 ntTSL 1 (best) BASIC23.63■■□□□ 1.37
Slc44a4Q91VA1 Sult4a1-201ENSMUST00000082365 2383 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
Slc44a4Q91VA1 Bcl11b-202ENSMUST00000109887 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC23.63■■□□□ 1.37
Slc44a4Q91VA1 Polr2j-202ENSMUST00000111127 900 ntTSL 2 BASIC23.63■■□□□ 1.37
Slc44a4Q91VA1 Nfe2l3-203ENSMUST00000160133 1125 ntTSL 1 (best) BASIC23.63■■□□□ 1.37
Slc44a4Q91VA1 Zcrb1-208ENSMUST00000162160 850 ntAPPRIS ALT1 TSL 1 (best) BASIC23.63■■□□□ 1.37
Slc44a4Q91VA1 Anapc13-204ENSMUST00000190279 589 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
Slc44a4Q91VA1 Gm44899-202ENSMUST00000209433 511 ntTSL 5 BASIC23.63■■□□□ 1.37
Slc44a4Q91VA1 Hpse-202ENSMUST00000112908 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC23.63■■□□□ 1.37
Slc44a4Q91VA1 Ttc7b-201ENSMUST00000062957 3446 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
Slc44a4Q91VA1 Espn-205ENSMUST00000084114 1645 ntTSL 1 (best) BASIC23.62■■□□□ 1.37
Slc44a4Q91VA1 Fip1l1-202ENSMUST00000113534 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC23.62■■□□□ 1.37
Slc44a4Q91VA1 D830036C21Rik-201ENSMUST00000207444 453 ntTSL 3 BASIC23.62■■□□□ 1.37
Slc44a4Q91VA1 Zbtb7a-204ENSMUST00000121840 1676 ntTSL 1 (best) BASIC23.62■■□□□ 1.37
Slc44a4Q91VA1 Mcam-201ENSMUST00000034650 2989 ntAPPRIS P2 TSL 1 (best) BASIC23.62■■□□□ 1.37
Slc44a4Q91VA1 Cant1-205ENSMUST00000106289 1600 ntTSL 1 (best) BASIC23.62■■□□□ 1.37
Retrieved 100 of 76,532 protein–RNA pairs in 22.7 ms