Protein–RNA interactions for Protein: Q8CFL8

Zswim3, Zinc finger SWIM domain-containing protein 3, mousemouse

Predictions only

Length 695 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Zswim3Q8CFL8 A930001C03Rik-204ENSMUST00000154407 1402 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
Zswim3Q8CFL8 Sept4-206ENSMUST00000122067 1303 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
Zswim3Q8CFL8 March11-201ENSMUST00000126304 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC22.03■■□□□ 1.12
Zswim3Q8CFL8 Mef2a-203ENSMUST00000076325 2664 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
Zswim3Q8CFL8 Fastk-201ENSMUST00000030800 1893 ntAPPRIS P2 TSL 1 (best) BASIC22.03■■□□□ 1.12
Zswim3Q8CFL8 Pcyt2-203ENSMUST00000106188 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC22.03■■□□□ 1.12
Zswim3Q8CFL8 Triobp-201ENSMUST00000109687 2570 ntAPPRIS ALT2 TSL 1 (best) BASIC22.02■■□□□ 1.12
Zswim3Q8CFL8 AC158538.1-201ENSMUST00000225870 294 ntBASIC22.02■■□□□ 1.12
Zswim3Q8CFL8 Prdx5-201ENSMUST00000025904 1262 ntAPPRIS P2 TSL 1 (best) BASIC22.02■■□□□ 1.12
Zswim3Q8CFL8 Uap1-201ENSMUST00000027981 2283 ntAPPRIS P3 TSL 1 (best) BASIC22.02■■□□□ 1.12
Zswim3Q8CFL8 Tbxa2r-201ENSMUST00000105325 1765 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.11
Zswim3Q8CFL8 Iars2-202ENSMUST00000110974 2431 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
Zswim3Q8CFL8 Tcf4-246ENSMUST00000202116 2986 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
Zswim3Q8CFL8 Cacnb1-205ENSMUST00000107562 1745 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
Zswim3Q8CFL8 Sqstm1-205ENSMUST00000143379 1266 ntTSL 5 BASIC22.01■■□□□ 1.11
Zswim3Q8CFL8 Tecr-203ENSMUST00000165740 1120 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
Zswim3Q8CFL8 4930412O13Rik-201ENSMUST00000026889 1187 ntAPPRIS P5 TSL 1 (best) BASIC22.01■■□□□ 1.11
Zswim3Q8CFL8 Olfr1411-201ENSMUST00000073748 972 ntAPPRIS P1 BASIC22.01■■□□□ 1.11
Zswim3Q8CFL8 Moap1-201ENSMUST00000173760 1312 ntAPPRIS P1 TSL 2 BASIC22.01■■□□□ 1.11
Zswim3Q8CFL8 Eda-204ENSMUST00000113777 1056 ntTSL 5 BASIC22■■□□□ 1.11
Zswim3Q8CFL8 Nnat-205ENSMUST00000153739 1146 ntAPPRIS ALT1 TSL 1 (best) BASIC22■■□□□ 1.11
Zswim3Q8CFL8 Gm3264-202ENSMUST00000166776 882 ntAPPRIS ALT2 TSL 5 BASIC22■■□□□ 1.11
Zswim3Q8CFL8 Nnat-206ENSMUST00000172487 404 ntTSL 5 BASIC22■■□□□ 1.11
Zswim3Q8CFL8 Nnat-210ENSMUST00000173839 1135 ntTSL 1 (best) BASIC22■■□□□ 1.11
Zswim3Q8CFL8 Gm2990-201ENSMUST00000180662 1118 ntTSL 1 (best) BASIC22■■□□□ 1.11
Zswim3Q8CFL8 Rab6b-202ENSMUST00000189134 716 ntTSL 3 BASIC22■■□□□ 1.11
Zswim3Q8CFL8 Eda-201ENSMUST00000071453 1152 ntTSL 1 (best) BASIC22■■□□□ 1.11
Zswim3Q8CFL8 Onecut3-201ENSMUST00000051773 4776 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
Zswim3Q8CFL8 Nfkbid-203ENSMUST00000108176 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC22■■□□□ 1.11
Zswim3Q8CFL8 Ears2-201ENSMUST00000033159 2046 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
Zswim3Q8CFL8 Camsap1-212ENSMUST00000183461 5090 ntAPPRIS ALT2 TSL 5 BASIC22■■□□□ 1.11
Zswim3Q8CFL8 Peli3-201ENSMUST00000025834 1971 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
Zswim3Q8CFL8 Lrrc75a-201ENSMUST00000057194 1984 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
Zswim3Q8CFL8 Josd2-204ENSMUST00000118628 864 ntAPPRIS P1 TSL 2 BASIC21.99■■□□□ 1.11
Zswim3Q8CFL8 Dsg2-203ENSMUST00000121837 953 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
Zswim3Q8CFL8 Tmem54-201ENSMUST00000030575 1064 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
Zswim3Q8CFL8 Josd2-201ENSMUST00000035844 930 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
Zswim3Q8CFL8 Ube2s-201ENSMUST00000079496 1238 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
Zswim3Q8CFL8 Rexo5-201ENSMUST00000033218 1966 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
Zswim3Q8CFL8 Stn1-201ENSMUST00000049369 1992 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
Zswim3Q8CFL8 AC164883.3-201ENSMUST00000227396 1774 ntBASIC21.98■■□□□ 1.11
Zswim3Q8CFL8 Gm13148-201ENSMUST00000118892 745 ntBASIC21.98■■□□□ 1.11
Zswim3Q8CFL8 Gm13168-201ENSMUST00000121771 632 ntBASIC21.98■■□□□ 1.11
Zswim3Q8CFL8 Taz-208ENSMUST00000132437 768 ntTSL 3 BASIC21.98■■□□□ 1.11
Zswim3Q8CFL8 Fam3c-203ENSMUST00000163963 1617 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
Zswim3Q8CFL8 Sdccag3-204ENSMUST00000114102 2193 ntAPPRIS P3 TSL 1 (best) BASIC21.98■■□□□ 1.11
Zswim3Q8CFL8 Dvl1-208ENSMUST00000168552 2776 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
Zswim3Q8CFL8 Rgs19-207ENSMUST00000108779 642 ntTSL 5 BASIC21.97■■□□□ 1.11
Zswim3Q8CFL8 Tmem239-201ENSMUST00000055421 1291 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
Zswim3Q8CFL8 Foxj3-209ENSMUST00000162267 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC21.97■■□□□ 1.11
Zswim3Q8CFL8 Cryzl1-203ENSMUST00000117644 1727 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
Zswim3Q8CFL8 Ankrd9-201ENSMUST00000043459 1706 ntAPPRIS P2 TSL 1 (best) BASIC21.97■■□□□ 1.11
Zswim3Q8CFL8 Dedd2-201ENSMUST00000058702 1828 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
Zswim3Q8CFL8 Klc3-201ENSMUST00000047170 1901 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
Zswim3Q8CFL8 Esyt2-201ENSMUST00000100986 5560 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
Zswim3Q8CFL8 Gm7977-201ENSMUST00000193787 748 ntBASIC21.96■■□□□ 1.11
Zswim3Q8CFL8 Gm43859-201ENSMUST00000200075 1412 ntBASIC21.96■■□□□ 1.11
Zswim3Q8CFL8 Gsr-201ENSMUST00000033992 2673 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
Zswim3Q8CFL8 Stxbp3-202ENSMUST00000106596 553 ntTSL 2 BASIC21.95■■□□□ 1.1
Zswim3Q8CFL8 Uncx-202ENSMUST00000174792 1196 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
Zswim3Q8CFL8 Map1lc3b-203ENSMUST00000181521 775 ntTSL 3 BASIC21.95■■□□□ 1.1
Zswim3Q8CFL8 Prmt1-210ENSMUST00000208829 621 ntTSL 5 BASIC21.95■■□□□ 1.1
Zswim3Q8CFL8 1700018M17Rik-201ENSMUST00000052502 456 ntBASIC21.95■■□□□ 1.1
Zswim3Q8CFL8 Ubxn1-201ENSMUST00000096255 1041 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
Zswim3Q8CFL8 AC153962.1-201ENSMUST00000218530 1948 ntBASIC21.95■■□□□ 1.1
Zswim3Q8CFL8 Gsto2-201ENSMUST00000056159 1351 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
Zswim3Q8CFL8 Strn3-202ENSMUST00000169503 2791 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
Zswim3Q8CFL8 Fbxl14-201ENSMUST00000032094 2963 ntAPPRIS P1 BASIC21.95■■□□□ 1.1
Zswim3Q8CFL8 Tle1-205ENSMUST00000107337 2067 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
Zswim3Q8CFL8 Ppp1cc-202ENSMUST00000102528 2384 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
Zswim3Q8CFL8 Gm10065-201ENSMUST00000076238 345 ntAPPRIS P1 BASIC21.94■■□□□ 1.1
Zswim3Q8CFL8 Rtl8a-201ENSMUST00000088779 1195 ntAPPRIS P1 BASIC21.94■■□□□ 1.1
Zswim3Q8CFL8 Aifm2-201ENSMUST00000067857 1442 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
Zswim3Q8CFL8 Maf1-201ENSMUST00000023212 1686 ntAPPRIS P2 TSL 1 (best) BASIC21.94■■□□□ 1.1
Zswim3Q8CFL8 Pgam1-201ENSMUST00000011896 1831 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
Zswim3Q8CFL8 Rasl11b-201ENSMUST00000051937 1812 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
Zswim3Q8CFL8 Spats2-201ENSMUST00000063517 3065 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
Zswim3Q8CFL8 Gm15556-201ENSMUST00000122904 663 ntTSL 5 BASIC21.93■■□□□ 1.1
Zswim3Q8CFL8 Carm1-201ENSMUST00000034703 3220 ntAPPRIS P3 TSL 1 (best) BASIC21.93■■□□□ 1.1
Zswim3Q8CFL8 Exosc4-201ENSMUST00000059045 1796 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
Zswim3Q8CFL8 BC107364-201ENSMUST00000093126 1159 ntAPPRIS P4 TSL 1 (best) BASIC21.93■■□□□ 1.1
Zswim3Q8CFL8 BC107364-202ENSMUST00000098841 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC21.93■■□□□ 1.1
Zswim3Q8CFL8 Hook1-201ENSMUST00000030306 5517 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
Zswim3Q8CFL8 A830035O19Rik-201ENSMUST00000216147 1898 ntBASIC21.92■■□□□ 1.1
Zswim3Q8CFL8 Cops7a-201ENSMUST00000032220 1817 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Zswim3Q8CFL8 Grin2d-201ENSMUST00000002848 5431 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Zswim3Q8CFL8 Gsx1-201ENSMUST00000065382 1773 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Zswim3Q8CFL8 Tmub1-202ENSMUST00000115033 1598 ntAPPRIS P1 TSL 5 BASIC21.92■■□□□ 1.1
Zswim3Q8CFL8 Cldn5-201ENSMUST00000043577 1414 ntAPPRIS P1 BASIC21.92■■□□□ 1.1
Zswim3Q8CFL8 Gm12473-201ENSMUST00000137535 579 ntTSL 5 BASIC21.92■■□□□ 1.1
Zswim3Q8CFL8 Tpsg1-204ENSMUST00000160920 867 ntTSL 3 BASIC21.92■■□□□ 1.1
Zswim3Q8CFL8 Atp23-202ENSMUST00000168520 1043 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Zswim3Q8CFL8 1700101I19Rik-202ENSMUST00000186712 510 ntBASIC21.92■■□□□ 1.1
Zswim3Q8CFL8 Msantd1-203ENSMUST00000202205 744 ntTSL 2 BASIC21.92■■□□□ 1.1
Zswim3Q8CFL8 Gm20049-201ENSMUST00000219950 730 ntBASIC21.92■■□□□ 1.1
Zswim3Q8CFL8 Armc10-201ENSMUST00000072896 2221 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Zswim3Q8CFL8 Trim3-202ENSMUST00000106789 2841 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Zswim3Q8CFL8 Rnf19b-206ENSMUST00000168461 2532 ntAPPRIS P2 TSL 5 BASIC21.91■■□□□ 1.1
Zswim3Q8CFL8 D030056L22Rik-201ENSMUST00000055792 1631 ntAPPRIS P2 TSL 1 (best) BASIC21.91■■□□□ 1.1
Zswim3Q8CFL8 Scarb1-202ENSMUST00000111390 2367 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
Retrieved 100 of 76,532 protein–RNA pairs in 21.8 ms