Protein–RNA interactions for Protein: Q8C552

Fam78a, Protein FAM78A, mousemouse

Predictions only

Length 283 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fam78aQ8C552 Actr5-201ENSMUST00000045644 2402 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Fam78aQ8C552 Cdkn1c-201ENSMUST00000037287 1901 ntAPPRIS P3 TSL 1 (best) BASIC21.29■■□□□ 1
Fam78aQ8C552 Tpst2-202ENSMUST00000071455 1741 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Fam78aQ8C552 Fance-202ENSMUST00000114801 1751 ntTSL 1 (best) BASIC21.28■■□□□ 1
Fam78aQ8C552 Rrad-201ENSMUST00000034351 1577 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Fam78aQ8C552 Ttc7b-201ENSMUST00000062957 3446 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Fam78aQ8C552 Dpyd-204ENSMUST00000149101 531 ntTSL 3 BASIC21.28■■□□□ 1
Fam78aQ8C552 Aplf-201ENSMUST00000032130 1889 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Fam78aQ8C552 Hif1a-203ENSMUST00000110464 1759 ntTSL 1 (best) BASIC21.28■■□□□ 1
Fam78aQ8C552 Gpr160-202ENSMUST00000108258 2139 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Fam78aQ8C552 Gm26995-201ENSMUST00000182216 1306 ntTSL 1 (best) BASIC21.28■■□□□ 1
Fam78aQ8C552 Ddah2-201ENSMUST00000007255 1342 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Fam78aQ8C552 Cic-202ENSMUST00000163320 6096 ntTSL 1 (best) BASIC21.27■■□□□ 1
Fam78aQ8C552 Cic-201ENSMUST00000005578 6099 ntTSL 5 BASIC21.27■■□□□ 1
Fam78aQ8C552 Zfp639-202ENSMUST00000191783 1988 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Fam78aQ8C552 Mbnl3-203ENSMUST00000114876 2243 ntAPPRIS P2 TSL 1 (best) BASIC21.27■■□□□ 1
Fam78aQ8C552 Zfp467-201ENSMUST00000101443 599 ntTSL 1 (best) BASIC21.27■■□□□ 1
Fam78aQ8C552 1810059C17Rik-201ENSMUST00000125173 487 ntTSL 1 (best) BASIC21.27■■□□□ 1
Fam78aQ8C552 Gadd45b-201ENSMUST00000015456 1284 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Fam78aQ8C552 Neurl1b-203ENSMUST00000183077 1084 ntTSL 5 BASIC21.27■■□□□ 1
Fam78aQ8C552 Gpx1-202ENSMUST00000191997 787 ntTSL 2 BASIC21.27■■□□□ 1
Fam78aQ8C552 0610010K14Rik-202ENSMUST00000021181 779 ntTSL 1 (best) BASIC21.27■■□□□ 1
Fam78aQ8C552 Rasl10a-201ENSMUST00000037218 1110 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Fam78aQ8C552 Gpx1-201ENSMUST00000082429 1072 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Fam78aQ8C552 Hpca-201ENSMUST00000030572 1525 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Fam78aQ8C552 Bspry-201ENSMUST00000030088 1757 ntAPPRIS P2 TSL 1 (best) BASIC21.27■■□□□ 1
Fam78aQ8C552 Fbxl3-204ENSMUST00000132004 2534 ntTSL 1 (best) BASIC21.27■■□□□ 1
Fam78aQ8C552 Dalrd3-201ENSMUST00000019183 1746 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Fam78aQ8C552 Heca-201ENSMUST00000037879 5098 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Fam78aQ8C552 Lzts2-202ENSMUST00000178087 2773 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Fam78aQ8C552 Cep78-201ENSMUST00000047704 2548 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Fam78aQ8C552 Wwc1-201ENSMUST00000018993 4531 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Fam78aQ8C552 Cotl1-202ENSMUST00000168698 1520 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Fam78aQ8C552 1700081N11Rik-202ENSMUST00000221447 569 ntTSL 3 BASIC21.26■□□□□ 0.99
Fam78aQ8C552 Igfbp6-201ENSMUST00000023807 1112 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Fam78aQ8C552 Slc35b3-209ENSMUST00000225432 2216 ntAPPRIS P3 BASIC21.26■□□□□ 0.99
Fam78aQ8C552 Gnb5-206ENSMUST00000215875 2105 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Fam78aQ8C552 Trim47-201ENSMUST00000021120 2204 ntAPPRIS P4 TSL 1 (best) BASIC21.25■□□□□ 0.99
Fam78aQ8C552 0610038B21Rik-202ENSMUST00000184762 1524 ntBASIC21.25■□□□□ 0.99
Fam78aQ8C552 Fam241b-209ENSMUST00000142821 1283 ntAPPRIS P1 TSL 5 BASIC21.25■□□□□ 0.99
Fam78aQ8C552 Stum-202ENSMUST00000179826 601 ntAPPRIS ALT1 TSL 5 BASIC21.25■□□□□ 0.99
Fam78aQ8C552 Gm26507-201ENSMUST00000181838 1410 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Fam78aQ8C552 Gm11175-202ENSMUST00000211380 408 ntTSL 3 BASIC21.25■□□□□ 0.99
Fam78aQ8C552 Spcs1-207ENSMUST00000228767 1008 ntBASIC21.25■□□□□ 0.99
Fam78aQ8C552 Zbtb7a-202ENSMUST00000117956 1863 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Fam78aQ8C552 Rfx5-205ENSMUST00000107260 2355 ntAPPRIS P1 TSL 5 BASIC21.24■□□□□ 0.99
Fam78aQ8C552 Gyg-201ENSMUST00000118015 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
Fam78aQ8C552 Mfsd4b2-201ENSMUST00000045526 2285 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Fam78aQ8C552 Gm14281-201ENSMUST00000121700 1294 ntBASIC21.24■□□□□ 0.99
Fam78aQ8C552 Tmem234-215ENSMUST00000173758 453 ntTSL 2 BASIC21.24■□□□□ 0.99
Fam78aQ8C552 Nipsnap2-205ENSMUST00000186265 1600 ntAPPRIS P1 TSL 2 BASIC21.24■□□□□ 0.99
Fam78aQ8C552 Smarcc1-201ENSMUST00000088716 5717 ntAPPRIS P2 TSL 1 (best) BASIC21.24■□□□□ 0.99
Fam78aQ8C552 Krtap5-3-202ENSMUST00000187512 1652 ntAPPRIS P2 BASIC21.24■□□□□ 0.99
Fam78aQ8C552 Gm29394-202ENSMUST00000176935 1326 ntAPPRIS P5 TSL 2 BASIC21.24■□□□□ 0.99
Fam78aQ8C552 Aktip-202ENSMUST00000120213 2200 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Fam78aQ8C552 Atg3-201ENSMUST00000023343 2057 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Fam78aQ8C552 Shisa5-202ENSMUST00000112059 1910 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
Fam78aQ8C552 Zdhhc4-201ENSMUST00000001900 1364 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Fam78aQ8C552 Ypel1-201ENSMUST00000035682 3322 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Fam78aQ8C552 Kctd17-206ENSMUST00000162517 901 ntAPPRIS P4 TSL 1 (best) BASIC21.23■□□□□ 0.99
Fam78aQ8C552 Kctd17-209ENSMUST00000166142 826 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
Fam78aQ8C552 Ccdc84-211ENSMUST00000217270 681 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
Fam78aQ8C552 Sohlh1-201ENSMUST00000076989 1289 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Fam78aQ8C552 Fam60a-202ENSMUST00000081956 2737 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Fam78aQ8C552 Rnf19b-206ENSMUST00000168461 2532 ntAPPRIS P2 TSL 5 BASIC21.23■□□□□ 0.99
Fam78aQ8C552 Impdh1-201ENSMUST00000078155 2437 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Fam78aQ8C552 Arglu1-201ENSMUST00000048545 3197 ntAPPRIS P1 TSL 2 BASIC21.22■□□□□ 0.99
Fam78aQ8C552 Klhl22-201ENSMUST00000117192 2754 ntTSL 5 BASIC21.22■□□□□ 0.99
Fam78aQ8C552 Rab28-203ENSMUST00000201422 1697 ntTSL 5 BASIC21.22■□□□□ 0.99
Fam78aQ8C552 Gfra4-205ENSMUST00000110239 810 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
Fam78aQ8C552 Stx6-209ENSMUST00000195302 955 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
Fam78aQ8C552 Cystm1-201ENSMUST00000050584 831 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
Fam78aQ8C552 Smurf2-202ENSMUST00000103067 5290 ntTSL 5 BASIC21.22■□□□□ 0.99
Fam78aQ8C552 Pitx2-202ENSMUST00000042587 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Fam78aQ8C552 Olfr94-201ENSMUST00000055324 1304 ntAPPRIS P2 BASIC21.22■□□□□ 0.99
Fam78aQ8C552 Fbxw2-202ENSMUST00000091020 1838 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
Fam78aQ8C552 Maf1-205ENSMUST00000160853 1651 ntAPPRIS P2 TSL 1 (best) BASIC21.21■□□□□ 0.99
Fam78aQ8C552 Hoxc13-201ENSMUST00000001700 2461 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Fam78aQ8C552 Ltk-206ENSMUST00000182203 2232 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
Fam78aQ8C552 Mpzl1-210ENSMUST00000194437 643 ntTSL 3 BASIC21.21■□□□□ 0.99
Fam78aQ8C552 Mfap4-201ENSMUST00000040522 939 ntAPPRIS ALT2 TSL 2 BASIC21.21■□□□□ 0.99
Fam78aQ8C552 Cox7c-202ENSMUST00000078764 433 ntTSL 2 BASIC21.21■□□□□ 0.99
Fam78aQ8C552 Sebox-202ENSMUST00000125670 1300 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Fam78aQ8C552 Reep4-203ENSMUST00000226563 1444 ntBASIC21.21■□□□□ 0.99
Fam78aQ8C552 Sdhaf1-201ENSMUST00000098586 2490 ntAPPRIS P1 BASIC21.2■□□□□ 0.98
Fam78aQ8C552 Slc9a7-201ENSMUST00000072451 2512 ntAPPRIS P2 TSL 1 (best) BASIC21.2■□□□□ 0.98
Fam78aQ8C552 D030056L22Rik-201ENSMUST00000055792 1631 ntAPPRIS P2 TSL 1 (best) BASIC21.2■□□□□ 0.98
Fam78aQ8C552 Mettl26-205ENSMUST00000169308 1026 ntTSL 2 BASIC21.2■□□□□ 0.98
Fam78aQ8C552 H2-Ab1-201ENSMUST00000040828 1211 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Fam78aQ8C552 Whrn-204ENSMUST00000095037 2419 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
Fam78aQ8C552 Sel1l3-201ENSMUST00000031090 4512 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Fam78aQ8C552 Nfkbid-203ENSMUST00000108176 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
Fam78aQ8C552 Slc10a3-201ENSMUST00000037967 2023 ntAPPRIS P2 TSL 1 (best) BASIC21.19■□□□□ 0.98
Fam78aQ8C552 Bcl11b-202ENSMUST00000109887 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
Fam78aQ8C552 Mrpl52-201ENSMUST00000010550 418 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Fam78aQ8C552 P4hb-203ENSMUST00000168360 770 ntTSL 3 BASIC21.19■□□□□ 0.98
Fam78aQ8C552 Dlx6-203ENSMUST00000171311 1071 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Fam78aQ8C552 Gm27801-201ENSMUST00000184174 223 ntBASIC21.19■□□□□ 0.98
Fam78aQ8C552 Erh-205ENSMUST00000218740 981 ntTSL 2 BASIC21.19■□□□□ 0.98
Fam78aQ8C552 Lmo1-201ENSMUST00000036992 1282 ntAPPRIS P3 TSL 1 (best) BASIC21.19■□□□□ 0.98
Retrieved 100 of 76,532 protein–RNA pairs in 120.2 ms