Protein–RNA interactions for Protein: Q8C1Q6

Smim4, Small integral membrane protein 4, mousemouse

Predictions only

Length 80 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smim4Q8C1Q6 Irx2-201ENSMUST00000074372 2625 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Smim4Q8C1Q6 Tedc1-201ENSMUST00000049271 2441 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Smim4Q8C1Q6 Adrb1-201ENSMUST00000038949 2491 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
Smim4Q8C1Q6 Gm15043-201ENSMUST00000118843 1543 ntBASIC16.65■□□□□ 0.26
Smim4Q8C1Q6 D11Wsu47e-201ENSMUST00000042227 2196 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Smim4Q8C1Q6 Ipp-202ENSMUST00000106479 2118 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Smim4Q8C1Q6 Snrpa1-206ENSMUST00000153609 1248 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Smim4Q8C1Q6 P2ry2-202ENSMUST00000178340 2137 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Smim4Q8C1Q6 Mal2-201ENSMUST00000025356 2950 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Smim4Q8C1Q6 Ipp-201ENSMUST00000030461 2115 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
Smim4Q8C1Q6 Oaz1-201ENSMUST00000060987 1071 ntAPPRIS ALT1 TSL 5 BASIC16.65■□□□□ 0.26
Smim4Q8C1Q6 Stau2-217ENSMUST00000162751 3030 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Smim4Q8C1Q6 Aatf-201ENSMUST00000018841 1822 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Smim4Q8C1Q6 Ndel1-201ENSMUST00000018880 2382 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Smim4Q8C1Q6 Mtfr1l-201ENSMUST00000102550 2025 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Smim4Q8C1Q6 Sys1-202ENSMUST00000109352 2001 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
Smim4Q8C1Q6 4930524B15Rik-201ENSMUST00000102829 2000 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Smim4Q8C1Q6 Ccng2-201ENSMUST00000031331 2810 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Smim4Q8C1Q6 Hhipl1-201ENSMUST00000021685 5174 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Smim4Q8C1Q6 Agpat3-201ENSMUST00000001240 5980 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Smim4Q8C1Q6 Nsmf-213ENSMUST00000140737 862 ntTSL 5 BASIC16.64■□□□□ 0.25
Smim4Q8C1Q6 0610009L18Rik-201ENSMUST00000143813 619 ntTSL 2 BASIC16.64■□□□□ 0.25
Smim4Q8C1Q6 Bub3-205ENSMUST00000208571 747 ntTSL 5 BASIC16.64■□□□□ 0.25
Smim4Q8C1Q6 Nfkbib-202ENSMUST00000085851 1243 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Smim4Q8C1Q6 Gm15441-202ENSMUST00000107095 1653 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Smim4Q8C1Q6 Ccdc34-201ENSMUST00000028580 2070 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Smim4Q8C1Q6 Usp2-202ENSMUST00000065461 2057 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Smim4Q8C1Q6 Nrxn2-204ENSMUST00000113461 5505 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
Smim4Q8C1Q6 Galnt11-201ENSMUST00000045737 2552 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Smim4Q8C1Q6 Pou3f1-201ENSMUST00000053491 3849 ntAPPRIS P1 BASIC16.64■□□□□ 0.25
Smim4Q8C1Q6 Gm11532-201ENSMUST00000128111 5272 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Smim4Q8C1Q6 Mfsd6-205ENSMUST00000156876 4932 ntAPPRIS P4 TSL 5 BASIC16.63■□□□□ 0.25
Smim4Q8C1Q6 Timm8a1-201ENSMUST00000054213 1421 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Smim4Q8C1Q6 Vamp4-204ENSMUST00000135241 1461 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Smim4Q8C1Q6 Cdkl3-204ENSMUST00000109077 2605 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
Smim4Q8C1Q6 Zfp523-202ENSMUST00000073534 2654 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
Smim4Q8C1Q6 Gnptab-201ENSMUST00000020251 5390 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Smim4Q8C1Q6 Zswim8-208ENSMUST00000224751 5951 ntAPPRIS ALT2 BASIC16.63■□□□□ 0.25
Smim4Q8C1Q6 Desi2-204ENSMUST00000161075 2590 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Smim4Q8C1Q6 Zc3hav1l-201ENSMUST00000058524 6536 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Smim4Q8C1Q6 Cebpg-202ENSMUST00000130491 4709 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Smim4Q8C1Q6 Gm13001-201ENSMUST00000154285 774 ntTSL 2 BASIC16.62■□□□□ 0.25
Smim4Q8C1Q6 Uba5-201ENSMUST00000035166 2404 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Smim4Q8C1Q6 Caskin1-201ENSMUST00000024958 6172 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
Smim4Q8C1Q6 Rem1-201ENSMUST00000000369 1663 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Smim4Q8C1Q6 Spc24-201ENSMUST00000098942 1366 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Smim4Q8C1Q6 Magi2-203ENSMUST00000115267 4478 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Smim4Q8C1Q6 Dedd2-201ENSMUST00000058702 1828 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Smim4Q8C1Q6 Hmg20b-203ENSMUST00000105324 1540 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Smim4Q8C1Q6 Cep97-205ENSMUST00000121703 609 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Smim4Q8C1Q6 Ccdc74a-201ENSMUST00000056962 1273 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
Smim4Q8C1Q6 Hoxd13-201ENSMUST00000001872 2483 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Smim4Q8C1Q6 Ccdc149-202ENSMUST00000198008 2470 ntTSL 5 BASIC16.61■□□□□ 0.25
Smim4Q8C1Q6 Nrg3-203ENSMUST00000173780 2137 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
Smim4Q8C1Q6 Cep78-201ENSMUST00000047704 2548 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Smim4Q8C1Q6 Slc30a9-204ENSMUST00000162372 5711 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
Smim4Q8C1Q6 Sae1-201ENSMUST00000094815 1875 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Smim4Q8C1Q6 Nptx1-201ENSMUST00000026670 5217 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Smim4Q8C1Q6 Zfp644-204ENSMUST00000112696 5785 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
Smim4Q8C1Q6 Hyal2-203ENSMUST00000193747 1532 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Smim4Q8C1Q6 Plekhm2-201ENSMUST00000030751 4154 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Smim4Q8C1Q6 Cdh4-201ENSMUST00000000314 6388 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Smim4Q8C1Q6 Wrap73-201ENSMUST00000030895 1598 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Smim4Q8C1Q6 Tmem79-202ENSMUST00000107552 2063 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
Smim4Q8C1Q6 Paip1-201ENSMUST00000026520 2551 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
Smim4Q8C1Q6 Pbx1-202ENSMUST00000072863 1709 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Smim4Q8C1Q6 Uap1-202ENSMUST00000111350 2311 ntAPPRIS ALT1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Smim4Q8C1Q6 Antxr1-201ENSMUST00000042025 5253 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Smim4Q8C1Q6 Tmem260-209ENSMUST00000226422 6333 ntAPPRIS ALT2 BASIC16.6■□□□□ 0.25
Smim4Q8C1Q6 Vgf-202ENSMUST00000186451 2277 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
Smim4Q8C1Q6 Klhl15-205ENSMUST00000113916 2363 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Smim4Q8C1Q6 Tcte2-201ENSMUST00000053376 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Smim4Q8C1Q6 Zbtb7a-201ENSMUST00000048128 5938 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Smim4Q8C1Q6 Pink1-201ENSMUST00000030536 2375 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Smim4Q8C1Q6 Tmem230-206ENSMUST00000180286 1531 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
Smim4Q8C1Q6 2810474O19Rik-201ENSMUST00000046689 6066 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Smim4Q8C1Q6 Slc36a4-202ENSMUST00000115588 1745 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Smim4Q8C1Q6 Dhx33-204ENSMUST00000124464 1835 ntTSL 5 BASIC16.59■□□□□ 0.25
Smim4Q8C1Q6 Dennd2a-201ENSMUST00000036877 4468 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Smim4Q8C1Q6 Spock1-204ENSMUST00000186271 2005 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.25
Smim4Q8C1Q6 Gpatch3-201ENSMUST00000030662 2004 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Smim4Q8C1Q6 Mknk2-205ENSMUST00000200082 3439 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.25
Smim4Q8C1Q6 Ttc9b-201ENSMUST00000008088 2052 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Smim4Q8C1Q6 Gm10616-201ENSMUST00000205285 2127 ntBASIC16.58■□□□□ 0.25
Smim4Q8C1Q6 Qsox2-201ENSMUST00000036187 2559 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.25
Smim4Q8C1Q6 Tmem263-201ENSMUST00000095383 3616 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Smim4Q8C1Q6 Chst3-202ENSMUST00000135158 6108 ntAPPRIS P2 TSL 5 BASIC16.58■□□□□ 0.24
Smim4Q8C1Q6 Tsc22d1-203ENSMUST00000101618 1043 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Smim4Q8C1Q6 Phf2os1-201ENSMUST00000123212 498 ntTSL 3 BASIC16.58■□□□□ 0.24
Smim4Q8C1Q6 Bex1-201ENSMUST00000058125 866 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Smim4Q8C1Q6 Gm9780-202ENSMUST00000184915 1394 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Smim4Q8C1Q6 Espn-207ENSMUST00000105653 1411 ntTSL 5 BASIC16.58■□□□□ 0.24
Smim4Q8C1Q6 Rbm38-201ENSMUST00000029014 1768 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Smim4Q8C1Q6 Rhbdd3-201ENSMUST00000036320 1790 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Smim4Q8C1Q6 Hpdl-201ENSMUST00000055436 1804 ntAPPRIS P1 BASIC16.58■□□□□ 0.24
Smim4Q8C1Q6 Shisa5-202ENSMUST00000112059 1910 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
Smim4Q8C1Q6 Itsn2-215ENSMUST00000220311 6080 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
Smim4Q8C1Q6 Fpgs-201ENSMUST00000028148 2273 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Smim4Q8C1Q6 Lpcat3-201ENSMUST00000004381 2281 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Smim4Q8C1Q6 Fgfr2-217ENSMUST00000124096 2425 ntTSL 5 BASIC16.58■□□□□ 0.24
Retrieved 100 of 76,532 protein–RNA pairs in 13.5 ms