Protein–RNA interactions for Protein: Q80SX8

Pif1, ATP-dependent DNA helicase PIF1, mousemouse

Predictions only

Length 650 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pif1Q80SX8 Art5-201ENSMUST00000094128 1518 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
Pif1Q80SX8 Tomm40-202ENSMUST00000093552 1577 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Pif1Q80SX8 Senp6-201ENSMUST00000037484 5111 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
Pif1Q80SX8 H2afj-201ENSMUST00000074556 1831 ntAPPRIS P2 BASIC18.37■□□□□ 0.53
Pif1Q80SX8 Prdm11-205ENSMUST00000178666 1870 ntTSL 5 BASIC18.37■□□□□ 0.53
Pif1Q80SX8 Papd7-202ENSMUST00000198607 4750 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Pif1Q80SX8 Begain-203ENSMUST00000190647 2707 ntAPPRIS P2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Pif1Q80SX8 Sft2d3-201ENSMUST00000054984 2810 ntAPPRIS P1 BASIC18.36■□□□□ 0.53
Pif1Q80SX8 Magi3-202ENSMUST00000121198 5912 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
Pif1Q80SX8 Gm10849-201ENSMUST00000100397 618 ntBASIC18.36■□□□□ 0.53
Pif1Q80SX8 Deptor-203ENSMUST00000100660 1377 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Pif1Q80SX8 Gm14207-203ENSMUST00000156538 988 ntTSL 2 BASIC18.36■□□□□ 0.53
Pif1Q80SX8 8430422M14Rik-201ENSMUST00000199608 822 ntBASIC18.36■□□□□ 0.53
Pif1Q80SX8 Myadml2-201ENSMUST00000026134 931 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Pif1Q80SX8 Tbc1d2b-201ENSMUST00000041767 5956 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Pif1Q80SX8 Rasl11b-201ENSMUST00000051937 1812 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Pif1Q80SX8 Crh-201ENSMUST00000061294 1320 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Pif1Q80SX8 Gm43653-201ENSMUST00000198136 1608 ntTSL 3 BASIC18.35■□□□□ 0.53
Pif1Q80SX8 Dtymk-202ENSMUST00000112890 1055 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Pif1Q80SX8 1700016H13Rik-203ENSMUST00000120108 797 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
Pif1Q80SX8 Plac9b-203ENSMUST00000184142 1040 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Pif1Q80SX8 Gm18671-201ENSMUST00000214826 683 ntBASIC18.35■□□□□ 0.53
Pif1Q80SX8 Ntsr2-202ENSMUST00000220892 846 ntTSL 3 BASIC18.35■□□□□ 0.53
Pif1Q80SX8 Cadm1-201ENSMUST00000034581 1254 ntAPPRIS ALT1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Pif1Q80SX8 Fezf2-203ENSMUST00000224714 2429 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
Pif1Q80SX8 Barhl1-203ENSMUST00000113849 2102 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Pif1Q80SX8 Rexo5-201ENSMUST00000033218 1966 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Pif1Q80SX8 Stn1-201ENSMUST00000049369 1992 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Pif1Q80SX8 Fam60a-202ENSMUST00000081956 2737 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Pif1Q80SX8 Cdc20-201ENSMUST00000006565 1793 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Pif1Q80SX8 Cavin3-201ENSMUST00000047040 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Pif1Q80SX8 Bend6-201ENSMUST00000062289 2487 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Pif1Q80SX8 Trip10-207ENSMUST00000224947 2016 ntAPPRIS P2 BASIC18.34■□□□□ 0.53
Pif1Q80SX8 Rell2-204ENSMUST00000163591 1057 ntTSL 5 BASIC18.34■□□□□ 0.53
Pif1Q80SX8 Chrac1-201ENSMUST00000089765 871 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Pif1Q80SX8 Fcrlb-201ENSMUST00000094337 1284 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Pif1Q80SX8 Cbx3-201ENSMUST00000031862 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Pif1Q80SX8 Fndc5-201ENSMUST00000102600 2763 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Pif1Q80SX8 Adrm1-201ENSMUST00000061437 1535 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Pif1Q80SX8 Rce1-201ENSMUST00000025823 1402 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Pif1Q80SX8 Maf-202ENSMUST00000109104 6360 ntAPPRIS P2 BASIC18.33■□□□□ 0.53
Pif1Q80SX8 Znrf3-201ENSMUST00000109867 6311 ntAPPRIS P3 TSL 5 BASIC18.33■□□□□ 0.53
Pif1Q80SX8 Lig3-204ENSMUST00000131537 1782 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
Pif1Q80SX8 Lig3-209ENSMUST00000173009 1785 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
Pif1Q80SX8 Gm26775-201ENSMUST00000180684 2197 ntTSL 5 BASIC18.33■□□□□ 0.52
Pif1Q80SX8 Pianp-204ENSMUST00000160704 1116 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.52
Pif1Q80SX8 P2rx2-203ENSMUST00000195985 2096 ntAPPRIS P4 TSL 1 (best) BASIC18.33■□□□□ 0.52
Pif1Q80SX8 Mxi1-202ENSMUST00000025998 4996 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Pif1Q80SX8 Rfx5-205ENSMUST00000107260 2355 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.52
Pif1Q80SX8 Klc3-201ENSMUST00000047170 1901 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Pif1Q80SX8 Atp2b2-208ENSMUST00000205052 5658 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Pif1Q80SX8 Pou3f3-201ENSMUST00000054883 7409 ntAPPRIS P1 BASIC18.32■□□□□ 0.52
Pif1Q80SX8 Gdf15-202ENSMUST00000110103 1380 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Pif1Q80SX8 Thap4-206ENSMUST00000190116 5558 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Pif1Q80SX8 Agap2-202ENSMUST00000217941 5573 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Pif1Q80SX8 Best2-202ENSMUST00000209322 1944 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Pif1Q80SX8 Gm11421-201ENSMUST00000122124 294 ntBASIC18.32■□□□□ 0.52
Pif1Q80SX8 Jsrp1-203ENSMUST00000181039 1108 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Pif1Q80SX8 Gm37179-201ENSMUST00000194862 823 ntBASIC18.32■□□□□ 0.52
Pif1Q80SX8 Hes3-202ENSMUST00000218045 962 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
Pif1Q80SX8 Mrpl40-201ENSMUST00000023391 1185 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Pif1Q80SX8 B230217C12Rik-201ENSMUST00000054783 1189 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
Pif1Q80SX8 Rer1-201ENSMUST00000030914 1596 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Pif1Q80SX8 Ergic1-206ENSMUST00000167662 2754 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Pif1Q80SX8 Acot5-202ENSMUST00000072505 1401 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Pif1Q80SX8 Usp39-201ENSMUST00000070345 2244 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Pif1Q80SX8 Mau2-206ENSMUST00000212451 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Pif1Q80SX8 Ankrd13d-201ENSMUST00000056888 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Pif1Q80SX8 1700023F06Rik-202ENSMUST00000107026 1127 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Pif1Q80SX8 Kcnd3os-201ENSMUST00000130683 1091 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Pif1Q80SX8 Gm42778-201ENSMUST00000199644 553 ntBASIC18.31■□□□□ 0.52
Pif1Q80SX8 Evi5l-209ENSMUST00000177053 1542 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
Pif1Q80SX8 Abhd12-201ENSMUST00000056149 1999 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Pif1Q80SX8 Wbp1-201ENSMUST00000032111 1419 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Pif1Q80SX8 Acss2-203ENSMUST00000103142 2145 ntTSL 5 BASIC18.31■□□□□ 0.52
Pif1Q80SX8 Kazald1-202ENSMUST00000111948 1625 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Pif1Q80SX8 1700001C19Rik-201ENSMUST00000061885 1622 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
Pif1Q80SX8 Zbtb11os1-201ENSMUST00000186480 1350 ntBASIC18.3■□□□□ 0.52
Pif1Q80SX8 Wdsub1-202ENSMUST00000102751 1526 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Pif1Q80SX8 Gm8773-201ENSMUST00000101627 1268 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Pif1Q80SX8 Oxld1-201ENSMUST00000044007 813 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Pif1Q80SX8 H2-Ke6-201ENSMUST00000045467 965 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Pif1Q80SX8 Fam58b-201ENSMUST00000059468 1224 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
Pif1Q80SX8 Foxd1-201ENSMUST00000105098 5064 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
Pif1Q80SX8 Tmem222-201ENSMUST00000105907 1484 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Pif1Q80SX8 Msto1-201ENSMUST00000107494 2093 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Pif1Q80SX8 Pold2-201ENSMUST00000102922 1646 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Pif1Q80SX8 Sh3bp1-203ENSMUST00000089378 2001 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Pif1Q80SX8 Man1a-203ENSMUST00000105470 2847 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
Pif1Q80SX8 Set-201ENSMUST00000067996 2834 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Pif1Q80SX8 Cnnm4-201ENSMUST00000153128 4547 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Pif1Q80SX8 Ccdc85b-201ENSMUST00000179549 609 ntAPPRIS P1 BASIC18.29■□□□□ 0.52
Pif1Q80SX8 Cmtm7-204ENSMUST00000216760 665 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Pif1Q80SX8 Arl10-201ENSMUST00000026988 1046 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Pif1Q80SX8 Grifin-201ENSMUST00000042993 613 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Pif1Q80SX8 Zfp428-201ENSMUST00000071361 1182 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
Pif1Q80SX8 Hist1h2ao-201ENSMUST00000091745 480 ntAPPRIS P1 BASIC18.29■□□□□ 0.52
Pif1Q80SX8 Zfp523-202ENSMUST00000073534 2654 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
Pif1Q80SX8 Mpzl1-202ENSMUST00000111435 2285 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Pif1Q80SX8 Htr7-201ENSMUST00000099505 1606 ntTSL 5 BASIC18.28■□□□□ 0.52
Retrieved 100 of 76,532 protein–RNA pairs in 22.9 ms