Protein–RNA interactions for Protein: Q61216

Mre11, Double-strand break repair protein MRE11, mousemouse

Predictions only

Length 706 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mre11Q61216 Hnrnpul1-202ENSMUST00000108401 1240 ntTSL 1 (best) BASIC23.83■■□□□ 1.41
Mre11Q61216 Bmpr1a-201ENSMUST00000049005 5956 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
Mre11Q61216 Magi2-206ENSMUST00000197443 6578 ntAPPRIS ALT2 TSL 5 BASIC23.83■■□□□ 1.4
Mre11Q61216 Vps9d1-203ENSMUST00000122363 2952 ntAPPRIS P3 TSL 1 (best) BASIC23.82■■□□□ 1.4
Mre11Q61216 AC126028.2-201ENSMUST00000228100 1833 ntBASIC23.82■■□□□ 1.4
Mre11Q61216 Csf1-203ENSMUST00000120243 2097 ntAPPRIS P3 TSL 1 (best) BASIC23.82■■□□□ 1.4
Mre11Q61216 Clta-202ENSMUST00000107846 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC23.82■■□□□ 1.4
Mre11Q61216 Eif4h-205ENSMUST00000202622 2726 ntAPPRIS P3 TSL 1 (best) BASIC23.82■■□□□ 1.4
Mre11Q61216 Ppia-202ENSMUST00000132846 1170 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
Mre11Q61216 Cblc-202ENSMUST00000108449 1514 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
Mre11Q61216 Cpsf4-202ENSMUST00000160422 1756 ntAPPRIS ALT1 TSL 5 BASIC23.82■■□□□ 1.4
Mre11Q61216 Map6-206ENSMUST00000208605 2275 ntAPPRIS ALT2 TSL 1 (best) BASIC23.82■■□□□ 1.4
Mre11Q61216 Astn2-202ENSMUST00000084496 4675 ntAPPRIS ALT2 TSL 5 BASIC23.82■■□□□ 1.4
Mre11Q61216 Rcor1-201ENSMUST00000084968 5684 ntAPPRIS ALT2 TSL 1 (best) BASIC23.82■■□□□ 1.4
Mre11Q61216 Fam105a-203ENSMUST00000226170 3043 ntBASIC23.81■■□□□ 1.4
Mre11Q61216 Slc17a7-202ENSMUST00000209634 1860 ntTSL 5 BASIC23.81■■□□□ 1.4
Mre11Q61216 Gm7628-201ENSMUST00000134690 2010 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
Mre11Q61216 D5Ertd579e-204ENSMUST00000140653 2014 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
Mre11Q61216 Papola-212ENSMUST00000168186 2436 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
Mre11Q61216 Acvrl1-206ENSMUST00000121718 1906 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
Mre11Q61216 Gse1-202ENSMUST00000118136 4492 ntAPPRIS ALT2 TSL 1 (best) BASIC23.81■■□□□ 1.4
Mre11Q61216 Ciz1-205ENSMUST00000113338 2666 ntAPPRIS P3 TSL 5 BASIC23.81■■□□□ 1.4
Mre11Q61216 Tmprss5-205ENSMUST00000170246 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC23.81■■□□□ 1.4
Mre11Q61216 Fbxo24-202ENSMUST00000111002 2306 ntTSL 5 BASIC23.81■■□□□ 1.4
Mre11Q61216 Sigmar1-201ENSMUST00000059354 1640 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
Mre11Q61216 Tmem102-201ENSMUST00000051025 1933 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
Mre11Q61216 Gm4779-203ENSMUST00000147742 1991 ntAPPRIS P1 TSL 5 BASIC23.8■■□□□ 1.4
Mre11Q61216 Gm6802-201ENSMUST00000167843 1983 ntBASIC23.8■■□□□ 1.4
Mre11Q61216 Zfp653-201ENSMUST00000043922 2108 ntAPPRIS P3 TSL 1 (best) BASIC23.8■■□□□ 1.4
Mre11Q61216 Gm16192-201ENSMUST00000148357 937 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
Mre11Q61216 Dynll2-204ENSMUST00000178105 2187 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
Mre11Q61216 Tifa-201ENSMUST00000054483 2245 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
Mre11Q61216 Fbxl5-201ENSMUST00000047857 2858 ntAPPRIS P2 TSL 1 (best) BASIC23.8■■□□□ 1.4
Mre11Q61216 Rhbdd3-202ENSMUST00000101610 2333 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
Mre11Q61216 AU019823-202ENSMUST00000145139 2805 ntTSL 2 BASIC23.79■■□□□ 1.4
Mre11Q61216 Nelfe-202ENSMUST00000165953 1381 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
Mre11Q61216 Slc39a5-202ENSMUST00000167859 2025 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
Mre11Q61216 Gm16764-201ENSMUST00000138891 541 ntTSL 5 BASIC23.79■■□□□ 1.4
Mre11Q61216 Dynlrb1-204ENSMUST00000150602 788 ntTSL 2 BASIC23.79■■□□□ 1.4
Mre11Q61216 Psmg1-201ENSMUST00000023630 1044 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
Mre11Q61216 Atxn7-203ENSMUST00000223880 2946 ntAPPRIS P2 BASIC23.79■■□□□ 1.4
Mre11Q61216 Rarb-207ENSMUST00000225921 2756 ntBASIC23.79■■□□□ 1.4
Mre11Q61216 Kcnn4-201ENSMUST00000171904 1990 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
Mre11Q61216 Ism1-202ENSMUST00000184404 2964 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
Mre11Q61216 Lrrfip2-205ENSMUST00000196981 1839 ntAPPRIS ALT2 TSL 5 BASIC23.78■■□□□ 1.4
Mre11Q61216 Lrrc43-203ENSMUST00000196809 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC23.78■■□□□ 1.4
Mre11Q61216 Fam43b-201ENSMUST00000105032 2437 ntAPPRIS P1 BASIC23.78■■□□□ 1.4
Mre11Q61216 D130020L05Rik-203ENSMUST00000221044 803 ntTSL 2 BASIC23.78■■□□□ 1.4
Mre11Q61216 Tmem192-202ENSMUST00000079896 916 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
Mre11Q61216 Tmem62-201ENSMUST00000067582 2921 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
Mre11Q61216 Kdm3b-201ENSMUST00000043775 6363 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
Mre11Q61216 Art5-204ENSMUST00000106937 1713 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
Mre11Q61216 Hpse-202ENSMUST00000112908 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC23.78■■□□□ 1.4
Mre11Q61216 Vegfa-207ENSMUST00000142351 1973 ntAPPRIS ALT2 TSL 1 (best) BASIC23.78■■□□□ 1.4
Mre11Q61216 Minpp1-201ENSMUST00000025827 2619 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
Mre11Q61216 Psmd7-201ENSMUST00000044106 1581 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
Mre11Q61216 Fbxo45-201ENSMUST00000042732 4179 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
Mre11Q61216 Akt1s1-204ENSMUST00000107885 1812 ntAPPRIS ALT2 TSL 1 (best) BASIC23.77■■□□□ 1.4
Mre11Q61216 Naglu-201ENSMUST00000001802 2560 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
Mre11Q61216 Gm13256-201ENSMUST00000131297 520 ntTSL 3 BASIC23.77■■□□□ 1.4
Mre11Q61216 AC151971.4-201ENSMUST00000214717 704 ntBASIC23.77■■□□□ 1.4
Mre11Q61216 Dcun1d5-201ENSMUST00000034499 1122 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
Mre11Q61216 Csf2ra-201ENSMUST00000076046 1849 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
Mre11Q61216 Palm-202ENSMUST00000105379 2519 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
Mre11Q61216 Zfp821-206ENSMUST00000212964 2033 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
Mre11Q61216 Chtf8-205ENSMUST00000176515 694 ntTSL 2 BASIC23.76■■□□□ 1.39
Mre11Q61216 Rab26-202ENSMUST00000061764 1291 ntTSL 2 BASIC23.76■■□□□ 1.39
Mre11Q61216 Pomgnt1-203ENSMUST00000106498 2719 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
Mre11Q61216 Atp10a-201ENSMUST00000168747 5419 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
Mre11Q61216 Nfkbil1-201ENSMUST00000048994 1447 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
Mre11Q61216 Gm35558-201ENSMUST00000222675 2219 ntBASIC23.75■■□□□ 1.39
Mre11Q61216 Gm38342-201ENSMUST00000195710 2980 ntBASIC23.75■■□□□ 1.39
Mre11Q61216 Ripk2-201ENSMUST00000037035 2692 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
Mre11Q61216 Ssx2ip-201ENSMUST00000039021 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC23.75■■□□□ 1.39
Mre11Q61216 Plekhm2-201ENSMUST00000030751 4154 ntAPPRIS ALT2 TSL 1 (best) BASIC23.75■■□□□ 1.39
Mre11Q61216 Vps26a-201ENSMUST00000092473 2712 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
Mre11Q61216 E130218I03Rik-204ENSMUST00000131447 888 ntAPPRIS P1 TSL 5 BASIC23.75■■□□□ 1.39
Mre11Q61216 Dbp-204ENSMUST00000211513 1156 ntTSL 5 BASIC23.75■■□□□ 1.39
Mre11Q61216 Sec24b-201ENSMUST00000001079 5128 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
Mre11Q61216 Rims1-209ENSMUST00000218140 1434 ntTSL 5 BASIC23.75■■□□□ 1.39
Mre11Q61216 Wdsub1-202ENSMUST00000102751 1526 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
Mre11Q61216 Spata5l1-202ENSMUST00000152813 1526 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
Mre11Q61216 Tmem11-203ENSMUST00000168218 1511 ntTSL 2 BASIC23.74■■□□□ 1.39
Mre11Q61216 Pgam5-201ENSMUST00000059229 2044 ntAPPRIS P3 TSL 1 (best) BASIC23.74■■□□□ 1.39
Mre11Q61216 Tmem164-204ENSMUST00000112889 1742 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
Mre11Q61216 Krt24-201ENSMUST00000017255 1847 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
Mre11Q61216 Numbl-201ENSMUST00000079258 2760 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
Mre11Q61216 Paics-201ENSMUST00000031160 2482 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
Mre11Q61216 Rbm38-201ENSMUST00000029014 1768 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
Mre11Q61216 Oxsr1-201ENSMUST00000040853 4647 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
Mre11Q61216 Rab40c-207ENSMUST00000167626 2506 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
Mre11Q61216 Lca5l-201ENSMUST00000054855 2508 ntAPPRIS P2 TSL 1 (best) BASIC23.73■■□□□ 1.39
Mre11Q61216 2310022A10Rik-205ENSMUST00000187960 1989 ntAPPRIS ALT2 TSL 5 BASIC23.73■■□□□ 1.39
Mre11Q61216 Nkx2-1-202ENSMUST00000178477 2242 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
Mre11Q61216 Ltb4r1-201ENSMUST00000057569 1394 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
Mre11Q61216 Klf1-201ENSMUST00000067060 1530 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
Mre11Q61216 Magi3-201ENSMUST00000064371 6640 ntAPPRIS P3 TSL 1 (best) BASIC23.73■■□□□ 1.39
Mre11Q61216 Rab3ip-201ENSMUST00000020375 2690 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
Mre11Q61216 Vgf-204ENSMUST00000190827 2834 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
Mre11Q61216 Meis3-205ENSMUST00000176506 1839 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
Retrieved 100 of 76,532 protein–RNA pairs in 43.6 ms