Protein–RNA interactions for Protein: Q3V0M8

BC051142, Testis specific basic protein, mousemouse

Predictions only

Length 400 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BC051142Q3V0M8 Pomgnt1-203ENSMUST00000106498 2719 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
BC051142Q3V0M8 Hira-201ENSMUST00000004222 4218 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
BC051142Q3V0M8 Tpm1-206ENSMUST00000113686 998 ntTSL 5 BASIC21.32■■□□□ 1
BC051142Q3V0M8 8430432A02Rik-201ENSMUST00000039080 1248 ntBASIC21.32■■□□□ 1
BC051142Q3V0M8 1700056E22Rik-201ENSMUST00000050306 967 ntAPPRIS P1 BASIC21.32■■□□□ 1
BC051142Q3V0M8 Hs3st4-201ENSMUST00000106437 3189 ntAPPRIS P1 TSL 3 BASIC21.32■■□□□ 1
BC051142Q3V0M8 Pbx1-202ENSMUST00000072863 1709 ntTSL 1 (best) BASIC21.32■■□□□ 1
BC051142Q3V0M8 Srxn1-201ENSMUST00000041500 2812 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
BC051142Q3V0M8 Hpdl-201ENSMUST00000055436 1804 ntAPPRIS P1 BASIC21.32■■□□□ 1
BC051142Q3V0M8 Gyg-201ENSMUST00000118015 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC21.31■■□□□ 1
BC051142Q3V0M8 Mtfr1l-201ENSMUST00000102550 2025 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
BC051142Q3V0M8 AC166356.1-201ENSMUST00000228236 1426 ntBASIC21.31■■□□□ 1
BC051142Q3V0M8 Hoxd13-201ENSMUST00000001872 2483 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
BC051142Q3V0M8 Gm43530-201ENSMUST00000195920 274 ntBASIC21.31■■□□□ 1
BC051142Q3V0M8 Ptms-201ENSMUST00000032216 1149 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
BC051142Q3V0M8 Atp2b2-208ENSMUST00000205052 5658 ntTSL 1 (best) BASIC21.31■■□□□ 1
BC051142Q3V0M8 Kirrel3-202ENSMUST00000115148 2851 ntAPPRIS P3 TSL 5 BASIC21.31■■□□□ 1
BC051142Q3V0M8 Qsox2-201ENSMUST00000036187 2559 ntAPPRIS P1 TSL 5 BASIC21.31■■□□□ 1
BC051142Q3V0M8 Gnas-206ENSMUST00000109084 1695 ntAPPRIS ALT1 TSL 1 (best) BASIC21.31■■□□□ 1
BC051142Q3V0M8 Zbtb7a-204ENSMUST00000121840 1676 ntTSL 1 (best) BASIC21.31■■□□□ 1
BC051142Q3V0M8 Cpsf4-202ENSMUST00000160422 1756 ntAPPRIS ALT1 TSL 5 BASIC21.31■■□□□ 1
BC051142Q3V0M8 Mark2-207ENSMUST00000165286 2975 ntAPPRIS ALT2 TSL 5 BASIC21.3■■□□□ 1
BC051142Q3V0M8 Ncoa7-206ENSMUST00000215725 1445 ntTSL 1 (best) BASIC21.3■■□□□ 1
BC051142Q3V0M8 Arhgap23-202ENSMUST00000107601 5450 ntTSL 5 BASIC21.3■■□□□ 1
BC051142Q3V0M8 Rps19bp1-201ENSMUST00000052499 830 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
BC051142Q3V0M8 Cdc42ep5-201ENSMUST00000076831 1025 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
BC051142Q3V0M8 Baiap2-203ENSMUST00000103021 3398 ntAPPRIS ALT2 TSL 1 (best) BASIC21.3■■□□□ 1
BC051142Q3V0M8 Dalrd3-201ENSMUST00000019183 1746 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
BC051142Q3V0M8 Rell2-212ENSMUST00000177058 1762 ntAPPRIS P1 TSL 5 BASIC21.29■■□□□ 1
BC051142Q3V0M8 Laptm4a-201ENSMUST00000020909 1773 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
BC051142Q3V0M8 Rnaset2b-201ENSMUST00000089119 1013 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
BC051142Q3V0M8 Lmo2-208ENSMUST00000170926 1529 ntAPPRIS P1 TSL 2 BASIC21.29■■□□□ 1
BC051142Q3V0M8 Tmem79-202ENSMUST00000107552 2063 ntAPPRIS P1 TSL 5 BASIC21.28■■□□□ 1
BC051142Q3V0M8 Siah2-201ENSMUST00000070368 2511 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
BC051142Q3V0M8 Pou3f1-201ENSMUST00000053491 3849 ntAPPRIS P1 BASIC21.28■■□□□ 1
BC051142Q3V0M8 Uqcrc1-201ENSMUST00000026743 1653 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
BC051142Q3V0M8 Bag5-201ENSMUST00000054636 2139 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
BC051142Q3V0M8 Ap1ar-201ENSMUST00000051737 2662 ntAPPRIS P1 TSL 3 BASIC21.28■■□□□ 1
BC051142Q3V0M8 Ier3ip1-201ENSMUST00000026487 1395 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
BC051142Q3V0M8 Ppp1r18os-201ENSMUST00000145804 784 ntTSL 1 (best) BASIC21.28■■□□□ 1
BC051142Q3V0M8 A930032L01Rik-201ENSMUST00000195845 957 ntBASIC21.28■■□□□ 1
BC051142Q3V0M8 Hs2st1-201ENSMUST00000043325 6177 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
BC051142Q3V0M8 Pgam5-201ENSMUST00000059229 2044 ntAPPRIS P3 TSL 1 (best) BASIC21.28■■□□□ 1
BC051142Q3V0M8 Ptpmt1-203ENSMUST00000125001 3183 ntTSL 1 (best) BASIC21.27■■□□□ 1
BC051142Q3V0M8 Dgat1-201ENSMUST00000023214 1888 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
BC051142Q3V0M8 Endod1-203ENSMUST00000214236 419 ntAPPRIS ALT2 TSL 3 BASIC21.27■■□□□ 1
BC051142Q3V0M8 Cbfb-202ENSMUST00000109392 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC21.27■■□□□ 1
BC051142Q3V0M8 Trim33-201ENSMUST00000029444 8875 ntAPPRIS P4 TSL 1 (best) BASIC21.27■■□□□ 1
BC051142Q3V0M8 Sephs1-202ENSMUST00000115019 2933 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
BC051142Q3V0M8 Rasa1-201ENSMUST00000109552 4563 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
BC051142Q3V0M8 Htra3-201ENSMUST00000087629 2750 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
BC051142Q3V0M8 Kif27-203ENSMUST00000225388 5121 ntAPPRIS P1 BASIC21.26■□□□□ 0.99
BC051142Q3V0M8 Nup153-201ENSMUST00000021803 6109 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
BC051142Q3V0M8 Rab28-203ENSMUST00000201422 1697 ntTSL 5 BASIC21.26■□□□□ 0.99
BC051142Q3V0M8 Gm28050-202ENSMUST00000131029 663 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
BC051142Q3V0M8 Klhl8-201ENSMUST00000031254 3193 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
BC051142Q3V0M8 Mvb12b-201ENSMUST00000041555 4998 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
BC051142Q3V0M8 Gpr137-204ENSMUST00000099782 1742 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
BC051142Q3V0M8 Gm43909-201ENSMUST00000203443 1876 ntBASIC21.26■□□□□ 0.99
BC051142Q3V0M8 Mblac1-201ENSMUST00000057773 1308 ntAPPRIS P1 BASIC21.26■□□□□ 0.99
BC051142Q3V0M8 Ccnd3-218ENSMUST00000183177 2060 ntAPPRIS P1 TSL 5 BASIC21.25■□□□□ 0.99
BC051142Q3V0M8 Ung-201ENSMUST00000031587 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
BC051142Q3V0M8 Cbfb-201ENSMUST00000052209 2883 ntAPPRIS P3 TSL 1 (best) BASIC21.25■□□□□ 0.99
BC051142Q3V0M8 Josd2-211ENSMUST00000134398 563 ntTSL 5 BASIC21.25■□□□□ 0.99
BC051142Q3V0M8 Aars-201ENSMUST00000034441 5750 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
BC051142Q3V0M8 Gm10645-201ENSMUST00000098605 1090 ntAPPRIS P1 BASIC21.25■□□□□ 0.99
BC051142Q3V0M8 Fam3c-205ENSMUST00000165576 2826 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
BC051142Q3V0M8 Donson-203ENSMUST00000117159 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
BC051142Q3V0M8 Schip1-205ENSMUST00000182532 2059 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
BC051142Q3V0M8 Pigx-211ENSMUST00000189013 982 ntAPPRIS ALT2 TSL 2 BASIC21.24■□□□□ 0.99
BC051142Q3V0M8 Krt8-ps-201ENSMUST00000208495 945 ntBASIC21.24■□□□□ 0.99
BC051142Q3V0M8 Pigx-201ENSMUST00000096109 993 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
BC051142Q3V0M8 Uckl1os-201ENSMUST00000122831 2018 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
BC051142Q3V0M8 Naxd-202ENSMUST00000177955 1307 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
BC051142Q3V0M8 Ltk-202ENSMUST00000082130 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
BC051142Q3V0M8 Tmem230-206ENSMUST00000180286 1531 ntAPPRIS P1 TSL 2 BASIC21.24■□□□□ 0.99
BC051142Q3V0M8 Fkbp9-201ENSMUST00000031795 3009 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
BC051142Q3V0M8 Map2k2-207ENSMUST00000143517 2405 ntAPPRIS P3 TSL 1 (best) BASIC21.23■□□□□ 0.99
BC051142Q3V0M8 Ahsa2-201ENSMUST00000020529 3023 ntAPPRIS P3 TSL 1 (best) BASIC21.23■□□□□ 0.99
BC051142Q3V0M8 Gm26558-201ENSMUST00000180559 861 ntAPPRIS P1 BASIC21.23■□□□□ 0.99
BC051142Q3V0M8 Zfp213-201ENSMUST00000095606 2672 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
BC051142Q3V0M8 Brsk2-205ENSMUST00000172652 2501 ntTSL 5 BASIC21.23■□□□□ 0.99
BC051142Q3V0M8 Tusc3-203ENSMUST00000209440 1535 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
BC051142Q3V0M8 Baiap2-201ENSMUST00000026436 2394 ntAPPRIS P4 TSL 1 (best) BASIC21.23■□□□□ 0.99
BC051142Q3V0M8 Lig3-204ENSMUST00000131537 1782 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
BC051142Q3V0M8 Lig3-209ENSMUST00000173009 1785 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
BC051142Q3V0M8 Fdxacb1-203ENSMUST00000176335 1817 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
BC051142Q3V0M8 Rfk-201ENSMUST00000025617 2482 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
BC051142Q3V0M8 Lmbr1l-201ENSMUST00000023736 2300 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
BC051142Q3V0M8 Man1a-203ENSMUST00000105470 2847 ntAPPRIS P1 TSL 5 BASIC21.22■□□□□ 0.99
BC051142Q3V0M8 Tatdn2-201ENSMUST00000089018 3096 ntAPPRIS P3 TSL 1 (best) BASIC21.22■□□□□ 0.99
BC051142Q3V0M8 Baiap2-205ENSMUST00000106233 2442 ntAPPRIS ALT2 TSL 5 BASIC21.22■□□□□ 0.99
BC051142Q3V0M8 1700016H13Rik-205ENSMUST00000134926 1104 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
BC051142Q3V0M8 Sumf1-206ENSMUST00000172188 723 ntTSL 5 BASIC21.22■□□□□ 0.99
BC051142Q3V0M8 AI846148-201ENSMUST00000025924 3183 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
BC051142Q3V0M8 Uap1-202ENSMUST00000111350 2311 ntAPPRIS ALT1 TSL 1 (best) BASIC21.22■□□□□ 0.99
BC051142Q3V0M8 Cdk13-201ENSMUST00000042365 5202 ntAPPRIS P2 TSL 1 (best) BASIC21.22■□□□□ 0.99
BC051142Q3V0M8 Hnrnpf-202ENSMUST00000163168 2401 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
BC051142Q3V0M8 Socs2-213ENSMUST00000170690 2195 ntAPPRIS P1 TSL 3 BASIC21.21■□□□□ 0.99
BC051142Q3V0M8 Hp1bp3-205ENSMUST00000105827 5155 ntAPPRIS ALT2 TSL 5 BASIC21.21■□□□□ 0.99
Retrieved 100 of 76,532 protein–RNA pairs in 16.9 ms